RNA–Protein interactions for RNA: YGR184C

UBR1, Transcript of E3 ubiquitin ligase (N-recognin), yeastyeast

Gene UBR1, Length 5,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBR1YGR184C MSC2Q03455 724 aa2.31□□□□□ -2.04
UBR1YGR184C ARP9Q05123 467 aa2.31□□□□□ -2.04
UBR1YGR184C SMF3Q12078 473 aaPredicted RBP2.31□□□□□ -2.04
UBR1YGR184C GRX6Q12438 231 aa2.31□□□□□ -2.04
UBR1YGR184C CTT1P06115 562 aa2.3□□□□□ -2.04
UBR1YGR184C NAT1P12945 854 aaKnown RBP2.3□□□□□ -2.04
UBR1YGR184C SAM35P14693 329 aa2.3□□□□□ -2.04
UBR1YGR184C RFC5P38251 354 aa2.3□□□□□ -2.04
UBR1YGR184C FTH1P38310 465 aa2.3□□□□□ -2.04
UBR1YGR184C URB2P47108 1174 aa2.3□□□□□ -2.04
UBR1YGR184C LRS4Q04087 347 aaKnown RBP2.3□□□□□ -2.04
UBR1YGR184C YLR407WQ06070 228 aa2.3□□□□□ -2.04
UBR1YGR184C DIA2Q08496 732 aaPredicted RBP2.3□□□□□ -2.04
UBR1YGR184C FRS1P15624 595 aaKnown RBP2.3□□□□□ -2.04
UBR1YGR184C KGD2P19262 463 aaPredicted RBP2.3□□□□□ -2.04
UBR1YGR184C PRP28P23394 588 aa2.3□□□□□ -2.04
UBR1YGR184C POL12P38121 705 aaPredicted RBP2.3□□□□□ -2.04
UBR1YGR184C YEL068CP39977 110 aa2.3□□□□□ -2.04
UBR1YGR184C TPA1P40032 644 aaKnown RBP2.3□□□□□ -2.04
UBR1YGR184C MTR3P48240 250 aaPredicted RBP2.3□□□□□ -2.04
UBR1YGR184C DUO1P53168 247 aaKnown RBP2.3□□□□□ -2.04
UBR1YGR184C ORC3P54790 616 aa2.3□□□□□ -2.04
UBR1YGR184C SNO4Q04902 237 aa2.3□□□□□ -2.04
UBR1YGR184C HSP33Q08914 237 aaKnown RBP2.3□□□□□ -2.04
UBR1YGR184C HSP32Q08992 237 aa2.3□□□□□ -2.04
UBR1YGR184C ATP12P22135 325 aa2.3□□□□□ -2.04
UBR1YGR184C RRP1P35178 278 aaPredicted RBP2.3□□□□□ -2.04
UBR1YGR184C BFR1P38934 470 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
UBR1YGR184C PZF1P39933 429 aa2.3□□□□□ -2.04
UBR1YGR184C TRS31Q03337 283 aa2.3□□□□□ -2.04
UBR1YGR184C ECM22Q05958 814 aaPredicted RBP2.3□□□□□ -2.04
UBR1YGR184C YLR415CO13578 112 aa2.3□□□□□ -2.04
UBR1YGR184C SPE1P08432 466 aa2.3□□□□□ -2.04
UBR1YGR184C PET122P10355 254 aa2.3□□□□□ -2.04
UBR1YGR184C SSE1P32589 693 aaKnown RBP2.3□□□□□ -2.04
UBR1YGR184C ALG14P38242 237 aa2.3□□□□□ -2.04
UBR1YGR184C SKP2P42843 763 aa2.3□□□□□ -2.04
UBR1YGR184C YDR344CQ05510 147 aa2.3□□□□□ -2.04
UBR1YGR184C TY1A-BLQ12266 440 aa2.3□□□□□ -2.04
UBR1YGR184C YOR111WQ99210 232 aa2.3□□□□□ -2.04
UBR1YGR184C YLR302CO13544 120 aa2.3□□□□□ -2.04
UBR1YGR184C RPS4AP0CX35 261 aaKnown RBP2.3□□□□□ -2.04
UBR1YGR184C RPS4BP0CX36 261 aaKnown RBP2.3□□□□□ -2.04
UBR1YGR184C GUK1P15454 187 aaKnown RBP2.3□□□□□ -2.04
UBR1YGR184C ARP2P32381 391 aaKnown RBP2.3□□□□□ -2.04
UBR1YGR184C IME2P32581 645 aa2.3□□□□□ -2.04
UBR1YGR184C YBR138CP38277 524 aa2.3□□□□□ -2.04
UBR1YGR184C MKT1P40850 830 aaKnown RBP2.3□□□□□ -2.04
UBR1YGR184C YNL144CP53907 740 aa2.3□□□□□ -2.04
UBR1YGR184C ADE12P80210 433 aaKnown RBP2.3□□□□□ -2.04
UBR1YGR184C YPL071CQ02864 156 aa2.3□□□□□ -2.04
UBR1YGR184C RBA50Q04418 439 aa2.3□□□□□ -2.04
UBR1YGR184C YEH1Q07804 573 aa2.3□□□□□ -2.04
UBR1YGR184C ISA1Q07821 250 aaPredicted RBP2.3□□□□□ -2.04
UBR1YGR184C RUP1Q12242 671 aa2.3□□□□□ -2.04
UBR1YGR184C PDE1P22434 369 aa2.29□□□□□ -2.04
UBR1YGR184C RIT1P23796 513 aa2.29□□□□□ -2.04
UBR1YGR184C ADP1P25371 1049 aa2.29□□□□□ -2.04
UBR1YGR184C LRE1P25579 583 aaKnown RBP2.29□□□□□ -2.04
UBR1YGR184C IMG2P25642 146 aaPredicted RBP2.29□□□□□ -2.04
UBR1YGR184C MSP1P28737 362 aa2.29□□□□□ -2.04
UBR1YGR184C CCL1P37366 393 aa2.29□□□□□ -2.04
UBR1YGR184C SMF1P38925 575 aa2.29□□□□□ -2.04
UBR1YGR184C PES4P39684 611 aa2.29□□□□□ -2.04
UBR1YGR184C VFA1P40080 203 aa2.29□□□□□ -2.04
UBR1YGR184C YIL108WP40483 696 aaKnown RBP2.29□□□□□ -2.04
UBR1YGR184C ROG3P43602 733 aa2.29□□□□□ -2.04
UBR1YGR184C MAK10Q02197 733 aa2.29□□□□□ -2.04
UBR1YGR184C STP4Q07351 490 aa2.29□□□□□ -2.04
UBR1YGR184C LUC7Q07508 261 aaPredicted RBP2.29□□□□□ -2.04
UBR1YGR184C RIM20Q12033 661 aa2.29□□□□□ -2.04
UBR1YGR184C HER1Q12276 1246 aa2.29□□□□□ -2.04
UBR1YGR184C YVC1Q12324 675 aa2.29□□□□□ -2.04
UBR1YGR184C XRN1P22147 1528 aaKnown RBP2.29□□□□□ -2.04
UBR1YGR184C VRP1P37370 817 aa2.29□□□□□ -2.04
UBR1YGR184C SLZ1P40167 298 aa2.29□□□□□ -2.04
UBR1YGR184C RGI2P40188 164 aa2.29□□□□□ -2.04
UBR1YGR184C THI6P41835 540 aa2.29□□□□□ -2.04
UBR1YGR184C SSU1P41930 458 aa2.29□□□□□ -2.04
UBR1YGR184C YGR012WP53206 393 aa2.29□□□□□ -2.04
UBR1YGR184C IST1P53843 298 aaPredicted RBP2.29□□□□□ -2.04
UBR1YGR184C CUZ1P53899 274 aa2.29□□□□□ -2.04
UBR1YGR184C MTG1Q03151 367 aaPredicted RBP2.29□□□□□ -2.04
UBR1YGR184C YDL073WQ07454 984 aa2.29□□□□□ -2.04
UBR1YGR184C YOR022CQ12204 715 aa2.29□□□□□ -2.04
UBR1YGR184C AVL9Q12500 764 aa2.29□□□□□ -2.04
UBR1YGR184C STF1P01098 86 aa2.29□□□□□ -2.04
UBR1YGR184C GCD1P09032 578 aaPredicted RBP2.29□□□□□ -2.04
UBR1YGR184C PAP1P29468 568 aaKnown RBP2.29□□□□□ -2.04
UBR1YGR184C UIP3P39547 235 aa2.29□□□□□ -2.04
UBR1YGR184C GPB2P39717 880 aa2.29□□□□□ -2.04
UBR1YGR184C EAF5P39995 279 aa2.29□□□□□ -2.04
UBR1YGR184C MMM1P41800 426 aa2.29□□□□□ -2.04
UBR1YGR184C SDH1Q00711 640 aa2.29□□□□□ -2.04
UBR1YGR184C EGD1Q02642 157 aaKnown RBP2.29□□□□□ -2.04
UBR1YGR184C KAP120Q02932 1032 aa2.29□□□□□ -2.04
UBR1YGR184C PEX19Q07418 342 aa2.29□□□□□ -2.04
UBR1YGR184C POM34Q12445 299 aa2.29□□□□□ -2.04
UBR1YGR184C TUB2P02557 457 aaKnown RBP2.29□□□□□ -2.04
UBR1YGR184C RPL6BP05739 176 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 132.5 ms