RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W YML131WQ03102 365 aa2.49□□□□□ -2.01
SMD1YGR074W BRE1Q07457 700 aaKnown RBP2.49□□□□□ -2.01
SMD1YGR074W IWR1Q07532 353 aaPredicted RBP2.49□□□□□ -2.01
SMD1YGR074W AAD4Q07747 329 aa2.49□□□□□ -2.01
SMD1YGR074W DIN7Q12086 430 aa2.49□□□□□ -2.01
SMD1YGR074W BNR1P40450 1375 aa2.49□□□□□ -2.01
SMD1YGR074W SIR1P21691 654 aa2.48□□□□□ -2.01
SMD1YGR074W RIT1P23796 513 aa2.48□□□□□ -2.01
SMD1YGR074W MTC7P32633 139 aa2.48□□□□□ -2.01
SMD1YGR074W BEM3P32873 1128 aa2.48□□□□□ -2.01
SMD1YGR074W CTP1P38152 299 aa2.48□□□□□ -2.01
SMD1YGR074W CDS1P38221 457 aa2.48□□□□□ -2.01
SMD1YGR074W EHT1P38295 451 aa2.48□□□□□ -2.01
SMD1YGR074W NPR3P38742 1146 aa2.48□□□□□ -2.01
SMD1YGR074W KHA1P40309 873 aa2.48□□□□□ -2.01
SMD1YGR074W ARG2P40360 574 aa2.48□□□□□ -2.01
SMD1YGR074W YIL166CP40445 542 aa2.48□□□□□ -2.01
SMD1YGR074W IMA5P40884 581 aa2.48□□□□□ -2.01
SMD1YGR074W ERR3P42222 437 aa2.48□□□□□ -2.01
SMD1YGR074W CTR1P49573 406 aa2.48□□□□□ -2.01
SMD1YGR074W GLO1P50107 326 aa2.48□□□□□ -2.01
SMD1YGR074W VPS73P53142 486 aaKnown RBP2.48□□□□□ -2.01
SMD1YGR074W YGR054WP53235 642 aaKnown RBP2.48□□□□□ -2.01
SMD1YGR074W YGR151CP53287 111 aa2.48□□□□□ -2.01
SMD1YGR074W MOT3P54785 490 aaKnown RBP2.48□□□□□ -2.01
SMD1YGR074W DAK1P54838 584 aaKnown RBP2.48□□□□□ -2.01
SMD1YGR074W GTR1Q00582 310 aa2.48□□□□□ -2.01
SMD1YGR074W MFM1Q02783 413 aa2.48□□□□□ -2.01
SMD1YGR074W ENT2Q05785 613 aa2.48□□□□□ -2.01
SMD1YGR074W OPY2Q06810 360 aa2.48□□□□□ -2.01
SMD1YGR074W YDL086WQ07505 273 aa2.48□□□□□ -2.01
SMD1YGR074W YPL216WQ08964 1102 aa2.48□□□□□ -2.01
SMD1YGR074W NEW1Q08972 1196 aaKnown RBP2.48□□□□□ -2.01
SMD1YGR074W TGS1Q12052 315 aa2.48□□□□□ -2.01
SMD1YGR074W USV1Q12132 391 aa2.48□□□□□ -2.01
SMD1YGR074W SUT2Q12286 268 aa2.48□□□□□ -2.01
SMD1YGR074W SIR3P06701 978 aa2.47□□□□□ -2.01
SMD1YGR074W KIN3P22209 435 aa2.47□□□□□ -2.01
SMD1YGR074W CAP1P28495 268 aaKnown RBP2.47□□□□□ -2.01
SMD1YGR074W DSS4P32601 143 aa2.47□□□□□ -2.01
SMD1YGR074W TMT1P32643 299 aa2.47□□□□□ -2.01
SMD1YGR074W LOT5P34234 306 aa2.47□□□□□ -2.01
SMD1YGR074W TEF4P36008 412 aaKnown RBP2.47□□□□□ -2.01
SMD1YGR074W ELF1P36053 145 aa2.47□□□□□ -2.01
SMD1YGR074W GLG1P36143 616 aa2.47□□□□□ -2.01
SMD1YGR074W PIH1P38768 344 aa2.47□□□□□ -2.01
SMD1YGR074W PCL5P38794 229 aa2.47□□□□□ -2.01
SMD1YGR074W PUG1P40100 303 aa2.47□□□□□ -2.01
SMD1YGR074W RPT2P40327 437 aaKnown RBP2.47□□□□□ -2.01
SMD1YGR074W LRO1P40345 661 aa2.47□□□□□ -2.01
SMD1YGR074W TMA108P40462 946 aa2.47□□□□□ -2.01
SMD1YGR074W DIP5P53388 608 aa2.47□□□□□ -2.01
SMD1YGR074W SPC98P53540 846 aa2.47□□□□□ -2.01
SMD1YGR074W ATG4P53867 494 aa2.47□□□□□ -2.01
SMD1YGR074W ACS1Q01574 713 aa2.47□□□□□ -2.01
SMD1YGR074W TIM50Q02776 476 aa2.47□□□□□ -2.01
SMD1YGR074W TRS130Q03660 1102 aa2.47□□□□□ -2.01
SMD1YGR074W UFO1Q04511 668 aa2.47□□□□□ -2.01
SMD1YGR074W MLH3Q12083 715 aa2.47□□□□□ -2.01
SMD1YGR074W LEU2P04173 364 aaPredicted RBP2.46□□□□□ -2.02
SMD1YGR074W TPK1P06244 397 aa2.46□□□□□ -2.02
SMD1YGR074W THR1P17423 357 aaKnown RBP2.46□□□□□ -2.02
SMD1YGR074W VPS34P22543 875 aa2.46□□□□□ -2.02
SMD1YGR074W YCL049CP25577 312 aa2.46□□□□□ -2.02
SMD1YGR074W RPS7AP26786 190 aaKnown RBP2.46□□□□□ -2.02
SMD1YGR074W CHS3P29465 1165 aa2.46□□□□□ -2.02
SMD1YGR074W CNS1P33313 385 aa2.46□□□□□ -2.02
SMD1YGR074W RRN3P36070 627 aa2.46□□□□□ -2.02
SMD1YGR074W GMH1P36125 273 aa2.46□□□□□ -2.02
SMD1YGR074W STB5P38699 743 aa2.46□□□□□ -2.02
SMD1YGR074W FSH1P38777 243 aaKnown RBP2.46□□□□□ -2.02
SMD1YGR074W HRB1P38922 454 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
SMD1YGR074W ERP2P39704 215 aa2.46□□□□□ -2.02
SMD1YGR074W SPC72P39723 622 aa2.46□□□□□ -2.02
SMD1YGR074W NDC80P40460 691 aa2.46□□□□□ -2.02
SMD1YGR074W POL31P46957 487 aa2.46□□□□□ -2.02
SMD1YGR074W FHN1P53279 174 aa2.46□□□□□ -2.02
SMD1YGR074W NGL2Q03264 515 aaKnown RBP2.46□□□□□ -2.02
SMD1YGR074W TRS31Q03337 283 aa2.46□□□□□ -2.02
SMD1YGR074W EFR3Q03653 782 aaKnown RBP2.46□□□□□ -2.02
SMD1YGR074W CSR1Q06705 408 aaKnown RBP2.46□□□□□ -2.02
SMD1YGR074W IZH3Q07959 543 aa2.46□□□□□ -2.02
SMD1YGR074W SSP2Q08646 371 aa2.46□□□□□ -2.02
SMD1YGR074W ENT1Q12518 454 aa2.46□□□□□ -2.02
SMD1YGR074W ADE3P07245 946 aaKnown RBP2.45□□□□□ -2.02
SMD1YGR074W MTF2P10849 440 aa2.45□□□□□ -2.02
SMD1YGR074W DMC1P25453 334 aa2.45□□□□□ -2.02
SMD1YGR074W RPN12P32496 274 aa2.45□□□□□ -2.02
SMD1YGR074W CCL1P37366 393 aa2.45□□□□□ -2.02
SMD1YGR074W KSP1P38691 1029 aaKnown RBP2.45□□□□□ -2.02
SMD1YGR074W YHR097CP38809 366 aaKnown RBP2.45□□□□□ -2.02
SMD1YGR074W PMT6P42934 759 aa2.45□□□□□ -2.02
SMD1YGR074W ZAP1P47043 880 aa2.45□□□□□ -2.02
SMD1YGR074W YDL183CP48569 320 aa2.45□□□□□ -2.02
SMD1YGR074W IMA1P53051 589 aa2.45□□□□□ -2.02
SMD1YGR074W NMA2P53204 395 aa2.45□□□□□ -2.02
SMD1YGR074W GFD1Q04839 188 aaKnown RBP2.45□□□□□ -2.02
SMD1YGR074W EIS1Q05050 843 aaKnown RBP2.45□□□□□ -2.02
SMD1YGR074W THI7Q05998 598 aa2.45□□□□□ -2.02
SMD1YGR074W ARO10Q06408 635 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 73.8 ms