RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W COP1P53622 1201 aaKnown RBP2.05□□□□□ -2.08
LCD1YDR499W NUP145P49687 1317 aa2.05□□□□□ -2.08
LCD1YDR499W YER190C-BP0CX94 160 aa2.05□□□□□ -2.08
LCD1YDR499W YEL077W-AP0CX95 160 aa2.05□□□□□ -2.08
LCD1YDR499W YGR296C-BP0CX96 160 aa2.05□□□□□ -2.08
LCD1YDR499W YPL283W-BP0CX97 160 aa2.05□□□□□ -2.08
LCD1YDR499W YPR204C-AP0CX98 160 aa2.05□□□□□ -2.08
LCD1YDR499W MGM1P32266 881 aa2.05□□□□□ -2.08
LCD1YDR499W GDA1P32621 518 aa2.05□□□□□ -2.08
LCD1YDR499W DID4P36108 232 aa2.05□□□□□ -2.08
LCD1YDR499W UME1Q03010 460 aa2.05□□□□□ -2.08
LCD1YDR499W MRPL1Q04599 285 aa2.05□□□□□ -2.08
LCD1YDR499W NGL1Q08213 363 aaKnown RBP2.05□□□□□ -2.08
LCD1YDR499W SEC12P11655 471 aa2.04□□□□□ -2.08
LCD1YDR499W SNU56Q03782 492 aaKnown RBP2.04□□□□□ -2.08
LCD1YDR499W NUP53Q03790 475 aa2.04□□□□□ -2.08
LCD1YDR499W RAD33Q04231 177 aa2.04□□□□□ -2.08
LCD1YDR499W SNA4Q07549 140 aa2.04□□□□□ -2.08
LCD1YDR499W PNO1Q99216 274 aaKnown RBP2.04□□□□□ -2.08
LCD1YDR499W TUF1P02992 437 aaKnown RBP2.03□□□□□ -2.08
LCD1YDR499W ATP12P22135 325 aa2.03□□□□□ -2.08
LCD1YDR499W COQ3P27680 312 aa2.03□□□□□ -2.08
LCD1YDR499W DAL3P32459 195 aa2.03□□□□□ -2.08
LCD1YDR499W SER1P33330 395 aaKnown RBP2.03□□□□□ -2.08
LCD1YDR499W IMD2P38697 523 aaKnown RBP2.03□□□□□ -2.08
LCD1YDR499W CFD1P40558 293 aa2.03□□□□□ -2.08
LCD1YDR499W IMD3P50095 523 aaKnown RBP2.03□□□□□ -2.08
LCD1YDR499W MDR1P53258 950 aa2.03□□□□□ -2.08
LCD1YDR499W GIS2P53849 153 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
LCD1YDR499W YNL092WP53934 400 aa2.03□□□□□ -2.08
LCD1YDR499W CRT10Q08226 957 aa2.03□□□□□ -2.08
LCD1YDR499W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
LCD1YDR499W CDC5P32562 705 aa2.03□□□□□ -2.08
LCD1YDR499W MTG2P38860 518 aa2.03□□□□□ -2.08
LCD1YDR499W GPP1P41277 250 aaKnown RBP2.03□□□□□ -2.08
LCD1YDR499W LYS20P48570 428 aaKnown RBP2.03□□□□□ -2.08
LCD1YDR499W RNR4P49723 345 aaKnown RBP2.03□□□□□ -2.08
LCD1YDR499W BUD7Q08754 746 aa2.03□□□□□ -2.08
LCD1YDR499W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
LCD1YDR499W YCP4P25349 247 aaKnown RBP2.02□□□□□ -2.09
LCD1YDR499W ATO2P32907 282 aa2.02□□□□□ -2.09
LCD1YDR499W RPT3P33298 428 aaKnown RBP2.02□□□□□ -2.09
LCD1YDR499W PEA2P40091 420 aa2.02□□□□□ -2.09
LCD1YDR499W YIR016WP40572 265 aa2.02□□□□□ -2.09
LCD1YDR499W PMT3P47190 753 aa2.02□□□□□ -2.09
LCD1YDR499W GPG1P53130 126 aa2.02□□□□□ -2.09
LCD1YDR499W PEF1P53238 335 aa2.02□□□□□ -2.09
LCD1YDR499W RPL15BP54780 204 aaPredicted RBP2.02□□□□□ -2.09
LCD1YDR499W YML119WQ03208 357 aa2.02□□□□□ -2.09
LCD1YDR499W YOR389WQ08912 624 aa2.02□□□□□ -2.09
LCD1YDR499W RTC1Q08281 1341 aa2.02□□□□□ -2.09
LCD1YDR499W YEL076C-AP0CX16 216 aa2.02□□□□□ -2.09
LCD1YDR499W YLR464WP0CX17 216 aa2.02□□□□□ -2.09
LCD1YDR499W AEP2P22136 580 aa2.02□□□□□ -2.09
LCD1YDR499W FTH1P38310 465 aa2.02□□□□□ -2.09
LCD1YDR499W YEL076CP39971 216 aa2.02□□□□□ -2.09
LCD1YDR499W FAP7Q12055 197 aaPredicted RBP2.02□□□□□ -2.09
LCD1YDR499W GAL4P04386 881 aa2.01□□□□□ -2.09
LCD1YDR499W RRP43P25359 394 aaPredicted RBP2.01□□□□□ -2.09
LCD1YDR499W SDH8P38345 138 aa2.01□□□□□ -2.09
LCD1YDR499W GND1P38720 489 aaKnown RBP2.01□□□□□ -2.09
LCD1YDR499W CCT4P39078 528 aaKnown RBP2.01□□□□□ -2.09
LCD1YDR499W YAT2P40017 923 aa2.01□□□□□ -2.09
LCD1YDR499W MDV1P47025 714 aa2.01□□□□□ -2.09
LCD1YDR499W COG2P53271 262 aa2.01□□□□□ -2.09
LCD1YDR499W UBP16Q02863 499 aa2.01□□□□□ -2.09
LCD1YDR499W YPR027CQ12079 277 aa2.01□□□□□ -2.09
LCD1YDR499W SCO2P38072 301 aa2.01□□□□□ -2.09
LCD1YDR499W STB5P38699 743 aa2.01□□□□□ -2.09
LCD1YDR499W CIN1P40987 1014 aa2.01□□□□□ -2.09
LCD1YDR499W YNR029CP53729 429 aaKnown RBP2.01□□□□□ -2.09
LCD1YDR499W UTP14Q04500 899 aaKnown RBP2.01□□□□□ -2.09
LCD1YDR499W SRL1Q08673 210 aa2.01□□□□□ -2.09
LCD1YDR499W PFA4Q12006 378 aa2.01□□□□□ -2.09
LCD1YDR499W CET1O13297 549 aaPredicted RBP2□□□□□ -2.09
LCD1YDR499W ILS1P09436 1072 aaKnown RBP2□□□□□ -2.09
LCD1YDR499W AMD2P22580 549 aa2□□□□□ -2.09
LCD1YDR499W ARG1P22768 420 aa2□□□□□ -2.09
LCD1YDR499W MAK32P23060 363 aa2□□□□□ -2.09
LCD1YDR499W AIM17P23180 465 aaKnown RBP2□□□□□ -2.09
LCD1YDR499W YJR142WP47173 342 aa2□□□□□ -2.09
LCD1YDR499W MTD1Q02046 320 aaKnown RBP2□□□□□ -2.09
LCD1YDR499W YML053CQ04978 212 aa2□□□□□ -2.09
LCD1YDR499W YOR378WQ08902 515 aa2□□□□□ -2.09
LCD1YDR499W YPT1P01123 206 aaKnown RBP1.99□□□□□ -2.09
LCD1YDR499W CWH43P25618 953 aa1.99□□□□□ -2.09
LCD1YDR499W SAP1P39955 897 aaKnown RBP1.99□□□□□ -2.09
LCD1YDR499W IRC5P43610 853 aa1.99□□□□□ -2.09
LCD1YDR499W YGR237CP50089 785 aa1.99□□□□□ -2.09
LCD1YDR499W NDD1Q08887 554 aa1.99□□□□□ -2.09
LCD1YDR499W VPS5Q92331 675 aa1.99□□□□□ -2.09
LCD1YDR499W CBP3P21560 335 aa1.99□□□□□ -2.09
LCD1YDR499W SRP68P38687 599 aaKnown RBP1.99□□□□□ -2.09
LCD1YDR499W CIR1P42940 261 aa1.99□□□□□ -2.09
LCD1YDR499W COS12P53053 380 aa1.99□□□□□ -2.09
LCD1YDR499W BOP3P53958 396 aa1.99□□□□□ -2.09
LCD1YDR499W AAT1Q01802 451 aa1.99□□□□□ -2.09
LCD1YDR499W PLM2Q04383 521 aa1.99□□□□□ -2.09
LCD1YDR499W Q0010Q9ZZX9 128 aa1.99□□□□□ -2.09
LCD1YDR499W YCR043CP25361 127 aa1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms