RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeastyeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS72YDR485C URA7P28274 579 aaKnown RBP6.18□□□□□ -1.42
VPS72YDR485C EBP2P36049 427 aaKnown RBP6.18□□□□□ -1.42
VPS72YDR485C CDS1P38221 457 aa6.18□□□□□ -1.42
VPS72YDR485C YHR033WP38690 423 aa6.18□□□□□ -1.42
VPS72YDR485C MET18P40469 1032 aa6.18□□□□□ -1.42
VPS72YDR485C TAF4P50105 388 aa6.18□□□□□ -1.42
VPS72YDR485C CUZ1P53899 274 aa6.18□□□□□ -1.42
VPS72YDR485C GYL1Q04322 720 aa6.18□□□□□ -1.42
VPS72YDR485C GTB1Q04924 702 aa6.18□□□□□ -1.42
VPS72YDR485C SOD2P00447 233 aa6.18□□□□□ -1.42
VPS72YDR485C TUF1P02992 437 aaKnown RBP6.18□□□□□ -1.42
VPS72YDR485C TY2A-LR1P0C2J4 438 aa6.18□□□□□ -1.42
VPS72YDR485C TY2A-FP0CX61 438 aa6.18□□□□□ -1.42
VPS72YDR485C TY2A-GR2P0CX62 438 aa6.18□□□□□ -1.42
VPS72YDR485C SAM35P14693 329 aa6.18□□□□□ -1.42
VPS72YDR485C SAC7P17121 654 aa6.18□□□□□ -1.42
VPS72YDR485C TY2A-CP25383 438 aa6.18□□□□□ -1.42
VPS72YDR485C RSC6P25632 483 aa6.18□□□□□ -1.42
VPS72YDR485C RIB7P33312 244 aa6.18□□□□□ -1.42
VPS72YDR485C RTT105P40063 208 aa6.18□□□□□ -1.42
VPS72YDR485C YIL108WP40483 696 aaKnown RBP6.18□□□□□ -1.42
VPS72YDR485C EFM4P40516 257 aa6.18□□□□□ -1.42
VPS72YDR485C DJP1P40564 432 aa6.18□□□□□ -1.42
VPS72YDR485C ART5P53244 586 aaKnown RBP6.18□□□□□ -1.42
VPS72YDR485C CSL4P53859 292 aaPredicted RBP6.18□□□□□ -1.42
VPS72YDR485C PRO2P54885 456 aaKnown RBP6.18□□□□□ -1.42
VPS72YDR485C TY2A-DR2Q03483 438 aa6.18□□□□□ -1.42
VPS72YDR485C DPB4Q04603 196 aaKnown RBP6.18□□□□□ -1.42
VPS72YDR485C ADY4Q05955 493 aa6.18□□□□□ -1.42
VPS72YDR485C YLL032CQ07834 825 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
VPS72YDR485C TY2A-BQ12260 438 aa6.18□□□□□ -1.42
VPS72YDR485C TY2A-OR2Q12293 438 aa6.18□□□□□ -1.42
VPS72YDR485C TY2A-DR1Q12392 438 aa6.18□□□□□ -1.42
VPS72YDR485C TY2A-OR1Q12439 438 aa6.18□□□□□ -1.42
VPS72YDR485C TY2A-DR3Q99303 438 aa6.18□□□□□ -1.42
VPS72YDR485C PRE4P30657 266 aa6.17□□□□□ -1.42
VPS72YDR485C RPN2P32565 945 aaKnown RBP6.17□□□□□ -1.42
VPS72YDR485C MAE1P36013 669 aaKnown RBP6.17□□□□□ -1.42
VPS72YDR485C GPT2P36148 743 aa6.17□□□□□ -1.42
VPS72YDR485C APN2P38207 520 aa6.17□□□□□ -1.42
VPS72YDR485C CAB2P40506 365 aa6.17□□□□□ -1.42
VPS72YDR485C VMA13P41807 478 aaKnown RBP6.17□□□□□ -1.42
VPS72YDR485C GSM1P42950 618 aa6.17□□□□□ -1.42
VPS72YDR485C FET5P43561 622 aa6.17□□□□□ -1.42
VPS72YDR485C LYS5P50113 272 aa6.17□□□□□ -1.42
VPS72YDR485C YNR068CP53754 272 aa6.17□□□□□ -1.42
VPS72YDR485C TOF1P53840 1238 aa6.17□□□□□ -1.42
VPS72YDR485C RCO1Q04779 684 aa6.17□□□□□ -1.42
VPS72YDR485C VAM6Q07468 1049 aa6.17□□□□□ -1.42
VPS72YDR485C SSY5P47002 699 aa6.17□□□□□ -1.42
VPS72YDR485C TCB2P48231 1178 aa6.17□□□□□ -1.42
VPS72YDR485C REG1Q00816 1014 aa6.17□□□□□ -1.42
VPS72YDR485C UBP2Q01476 1272 aa6.17□□□□□ -1.42
VPS72YDR485C RNH1Q04740 348 aa6.17□□□□□ -1.42
VPS72YDR485C GPB1Q08886 897 aa6.17□□□□□ -1.42
VPS72YDR485C SGT2Q12118 346 aaKnown RBP6.17□□□□□ -1.42
VPS72YDR485C YLR302CO13544 120 aa6.16□□□□□ -1.42
VPS72YDR485C QCR6P00127 147 aa6.16□□□□□ -1.42
VPS72YDR485C RFC1P38630 861 aaKnown RBP6.16□□□□□ -1.42
VPS72YDR485C GCD10P41814 478 aa6.16□□□□□ -1.42
VPS72YDR485C ZIM17P42844 174 aa6.16□□□□□ -1.42
VPS72YDR485C ERV25P54837 211 aaKnown RBP6.16□□□□□ -1.42
VPS72YDR485C FDC1Q03034 503 aa6.16□□□□□ -1.42
VPS72YDR485C VPS36Q06696 566 aa6.16□□□□□ -1.42
VPS72YDR485C RCN2Q12044 265 aa6.16□□□□□ -1.42
VPS72YDR485C HOS1Q12214 470 aa6.16□□□□□ -1.42
VPS72YDR485C YDR461C-AQ2V2P7 80 aa6.16□□□□□ -1.42
VPS72YDR485C STE12P13574 688 aa6.16□□□□□ -1.42
VPS72YDR485C FRS1P15624 595 aaKnown RBP6.16□□□□□ -1.42
VPS72YDR485C RGI2P40188 164 aa6.16□□□□□ -1.42
VPS72YDR485C YIR007WP40566 764 aa6.16□□□□□ -1.42
VPS72YDR485C PUS2P53167 370 aa6.16□□□□□ -1.42
VPS72YDR485C ADE12P80210 433 aaKnown RBP6.16□□□□□ -1.42
VPS72YDR485C MAP1Q01662 387 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
VPS72YDR485C YMR265CQ03508 461 aaKnown RBP6.16□□□□□ -1.42
VPS72YDR485C MMR1Q06324 491 aa6.16□□□□□ -1.42
VPS72YDR485C FMP45Q07651 309 aa6.16□□□□□ -1.42
VPS72YDR485C SVS1Q12254 260 aa6.16□□□□□ -1.42
VPS72YDR485C PSY3Q12318 242 aa6.16□□□□□ -1.42
VPS72YDR485C CET1O13297 549 aaPredicted RBP6.15□□□□□ -1.42
VPS72YDR485C ERG8P24521 451 aa6.15□□□□□ -1.42
VPS72YDR485C PEP3P27801 918 aa6.15□□□□□ -1.42
VPS72YDR485C SMI1P32566 505 aa6.15□□□□□ -1.42
VPS72YDR485C PET127P32606 800 aa6.15□□□□□ -1.42
VPS72YDR485C GEX2P36173 615 aa6.15□□□□□ -1.42
VPS72YDR485C MET28P40573 187 aa6.15□□□□□ -1.42
VPS72YDR485C YJL171CP46992 396 aa6.15□□□□□ -1.42
VPS72YDR485C SNF12P53628 566 aa6.15□□□□□ -1.42
VPS72YDR485C INN1P53901 409 aa6.15□□□□□ -1.42
VPS72YDR485C NGL2Q03264 515 aaKnown RBP6.15□□□□□ -1.42
VPS72YDR485C ARX1Q03862 593 aaKnown RBP6.15□□□□□ -1.42
VPS72YDR485C GPM3Q12326 303 aa6.15□□□□□ -1.42
VPS72YDR485C RIB2Q12362 591 aaKnown RBP6.15□□□□□ -1.42
VPS72YDR485C SPE4Q12455 300 aa6.15□□□□□ -1.42
VPS72YDR485C NOP58Q12499 511 aaKnown RBP6.15□□□□□ -1.42
VPS72YDR485C RAS1P01119 309 aa6.15□□□□□ -1.43
VPS72YDR485C GYP6P32806 458 aa6.15□□□□□ -1.43
VPS72YDR485C YIL161WP40449 235 aaKnown RBP6.15□□□□□ -1.43
VPS72YDR485C BUD27P43573 796 aaKnown RBP RIP-Chip data6.15□□□□□ -1.43not detected
VPS72YDR485C ROK1P45818 564 aaPredicted RBP6.15□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms