RNA–Protein interactions for RNA: YDR317W

HIM1, Transcript of Protein of unknown function involved in DNA repair, yeast

Gene HIM1, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HIM1	YDR317W	TMA17	Q12513	150 aa		4.97	□□□□□ -1.61
HIM1	YDR317W	DGR2	P32330	852 aa		4.96	□□□□□ -1.62
HIM1	YDR317W	ENP1	P38333	483 aa	Known RBP	4.96	□□□□□ -1.62
HIM1	YDR317W	NIT2	P47016	307 aa		4.96	□□□□□ -1.62
HIM1	YDR317W	MFM1	Q02783	413 aa		4.96	□□□□□ -1.62
HIM1	YDR317W	FMP30	Q02883	468 aa		4.96	□□□□□ -1.62
HIM1	YDR317W	NGL2	Q03264	515 aa	Known RBP	4.96	□□□□□ -1.62
HIM1	YDR317W	HLR1	Q04429	423 aa		4.96	□□□□□ -1.62
HIM1	YDR317W	ARG7	Q04728	441 aa		4.96	□□□□□ -1.62
HIM1	YDR317W	MRI1	Q06489	411 aa	Known RBP	4.96	□□□□□ -1.62
HIM1	YDR317W	AEP2	P22136	580 aa		4.95	□□□□□ -1.62
HIM1	YDR317W	EAF5	P39995	279 aa		4.95	□□□□□ -1.62
HIM1	YDR317W	DUG1	P43616	481 aa	Known RBP	4.95	□□□□□ -1.62
HIM1	YDR317W	YGL117W	P53133	265 aa		4.95	□□□□□ -1.62
HIM1	YDR317W	ECM38	Q05902	660 aa	Predicted RBP	4.95	□□□□□ -1.62
HIM1	YDR317W	ULA1	Q12059	462 aa		4.95	□□□□□ -1.62
HIM1	YDR317W	YNL162W-A	Q3E7A8	72 aa		4.95	□□□□□ -1.62
HIM1	YDR317W	VPS34	P22543	875 aa		4.94	□□□□□ -1.62
HIM1	YDR317W	UGP1	P32861	499 aa	Known RBP	4.94	□□□□□ -1.62
HIM1	YDR317W	PEA2	P40091	420 aa		4.94	□□□□□ -1.62
HIM1	YDR317W	THI6	P41835	540 aa		4.94	□□□□□ -1.62
HIM1	YDR317W	RPS15	Q01855	142 aa	Known RBP	4.94	□□□□□ -1.62
HIM1	YDR317W	SKY1	Q03656	742 aa		4.94	□□□□□ -1.62
HIM1	YDR317W	COQ11	Q05892	277 aa		4.94	□□□□□ -1.62
HIM1	YDR317W	ARR3	Q06598	404 aa		4.94	□□□□□ -1.62
HIM1	YDR317W	AIM41	Q12032	185 aa		4.94	□□□□□ -1.62
HIM1	YDR317W	YEL076C-A	P0CX16	216 aa		4.93	□□□□□ -1.62
HIM1	YDR317W	YLR464W	P0CX17	216 aa		4.93	□□□□□ -1.62
HIM1	YDR317W	YEL076C	P39971	216 aa		4.93	□□□□□ -1.62
HIM1	YDR317W	LRO1	P40345	661 aa		4.93	□□□□□ -1.62
HIM1	YDR317W	IRC5	P43610	853 aa		4.93	□□□□□ -1.62
HIM1	YDR317W	TAX4	P47030	604 aa		4.93	□□□□□ -1.62
HIM1	YDR317W	SPC105	P53148	917 aa		4.93	□□□□□ -1.62
HIM1	YDR317W	BUD17	P53727	317 aa		4.93	□□□□□ -1.62
HIM1	YDR317W	NUP188	P52593	1655 aa	Known RBP	4.92	□□□□□ -1.62
HIM1	YDR317W	ADE5,7	P07244	802 aa	Known RBP	4.92	□□□□□ -1.62
HIM1	YDR317W	HOM2	P13663	365 aa	Known RBP	4.92	□□□□□ -1.62
HIM1	YDR317W	AAD3	P25612	363 aa		4.92	□□□□□ -1.62
HIM1	YDR317W	CNE1	P27825	502 aa		4.92	□□□□□ -1.62
HIM1	YDR317W	YBR071W	P38243	211 aa		4.92	□□□□□ -1.62
HIM1	YDR317W	PIP2	P52960	996 aa		4.92	□□□□□ -1.62
HIM1	YDR317W	DAK1	P54838	584 aa	Known RBP	4.92	□□□□□ -1.62
HIM1	YDR317W	CEF1	Q03654	590 aa	Predicted RBP	4.92	□□□□□ -1.62
HIM1	YDR317W	ERG11	P10614	530 aa		4.91	□□□□□ -1.62
HIM1	YDR317W	COX11	P19516	300 aa	Known RBP	4.91	□□□□□ -1.62
HIM1	YDR317W	HOP1	P20050	605 aa		4.91	□□□□□ -1.62
HIM1	YDR317W	YEL025C	P39991	1188 aa		4.91	□□□□□ -1.62
HIM1	YDR317W	ATG36	P46983	293 aa		4.91	□□□□□ -1.62
HIM1	YDR317W	CPR8	P53728	308 aa		4.91	□□□□□ -1.62
HIM1	YDR317W	SQS1	P53866	767 aa	Known RBP	4.91	□□□□□ -1.62
HIM1	YDR317W	COG6	P53959	839 aa		4.91	□□□□□ -1.62
HIM1	YDR317W	YOR378W	Q08902	515 aa		4.91	□□□□□ -1.62
HIM1	YDR317W	CWC2	Q12046	339 aa	Predicted RBP	4.91	□□□□□ -1.62
HIM1	YDR317W	SEC3	P33332	1336 aa	Known RBP	4.91	□□□□□ -1.62
HIM1	YDR317W	HEM12	P32347	362 aa	Predicted RBP	4.9	□□□□□ -1.63
HIM1	YDR317W	PAF1	P38351	445 aa		4.9	□□□□□ -1.63
HIM1	YDR317W	EMP65	P40085	556 aa		4.9	□□□□□ -1.63
HIM1	YDR317W	SLD3	P53135	668 aa		4.9	□□□□□ -1.63
HIM1	YDR317W	YNL018C	P53976	612 aa		4.9	□□□□□ -1.63
HIM1	YDR317W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
HIM1	YDR317W	RTK1	Q12100	620 aa	Predicted RBP	4.9	□□□□□ -1.63
HIM1	YDR317W	HAP1	P0CE41	1502 aa		4.9	□□□□□ -1.63
HIM1	YDR317W	USO1	P25386	1790 aa		4.9	□□□□□ -1.63
HIM1	YDR317W	IML1	P47170	1584 aa		4.9	□□□□□ -1.63
HIM1	YDR317W	PCK1	P10963	549 aa		4.89	□□□□□ -1.63
HIM1	YDR317W	KAR1	P11927	433 aa		4.89	□□□□□ -1.63
HIM1	YDR317W	TFC4	P33339	1025 aa		4.89	□□□□□ -1.63
HIM1	YDR317W	DHR2	P36009	735 aa	Predicted RBP	4.89	□□□□□ -1.63
HIM1	YDR317W	SRP68	P38687	599 aa	Known RBP	4.89	□□□□□ -1.63
HIM1	YDR317W	RIM4	P38741	713 aa		4.89	□□□□□ -1.63
HIM1	YDR317W	PEF1	P53238	335 aa		4.89	□□□□□ -1.63
HIM1	YDR317W	MTD1	Q02046	320 aa	Known RBP	4.89	□□□□□ -1.63
HIM1	YDR317W	RIM13	Q03792	727 aa		4.89	□□□□□ -1.63
HIM1	YDR317W	ZPS1	Q12512	249 aa		4.89	□□□□□ -1.63
HIM1	YDR317W	SSM4	P40318	1319 aa		4.89	□□□□□ -1.63
HIM1	YDR317W	TUF1	P02992	437 aa	Known RBP	4.88	□□□□□ -1.63
HIM1	YDR317W	CPA2	P03965	1118 aa	Known RBP	4.88	□□□□□ -1.63
HIM1	YDR317W	SSB1	P11484	613 aa	Known RBP	4.88	□□□□□ -1.63
HIM1	YDR317W	PMA2	P19657	947 aa		4.88	□□□□□ -1.63
HIM1	YDR317W	ORC2	P32833	620 aa		4.88	□□□□□ -1.63
HIM1	YDR317W	YPT10	P38146	199 aa		4.88	□□□□□ -1.63
HIM1	YDR317W	SSB2	P40150	613 aa	Known RBP	4.88	□□□□□ -1.63
HIM1	YDR317W	MNT2	P53059	558 aa		4.88	□□□□□ -1.63
HIM1	YDR317W	YPL216W	Q08964	1102 aa		4.88	□□□□□ -1.63
HIM1	YDR317W	AI5_ALPHA	Q9ZZX1	630 aa		4.88	□□□□□ -1.63
HIM1	YDR317W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.88	□□□□□ -1.63
HIM1	YDR317W	PDR5	P33302	1511 aa	Known RBP	4.87	□□□□□ -1.63
HIM1	YDR317W	VMR1	P38735	1592 aa		4.87	□□□□□ -1.63
HIM1	YDR317W	NUP1	P20676	1076 aa		4.87	□□□□□ -1.63
HIM1	YDR317W	VPS33	P20795	691 aa		4.87	□□□□□ -1.63
HIM1	YDR317W	ARG1	P22768	420 aa		4.87	□□□□□ -1.63
HIM1	YDR317W	PIH1	P38768	344 aa		4.87	□□□□□ -1.63
HIM1	YDR317W	YJL193W	P39542	402 aa		4.87	□□□□□ -1.63
HIM1	YDR317W	SAP4	P53036	818 aa		4.87	□□□□□ -1.63
HIM1	YDR317W	MDR1	P53258	950 aa		4.87	□□□□□ -1.63
HIM1	YDR317W	USA1	Q03714	838 aa		4.87	□□□□□ -1.63
HIM1	YDR317W	SLK19	Q08581	821 aa	Known RBP	4.87	□□□□□ -1.63
HIM1	YDR317W	RPL7A	P05737	244 aa	Known RBP	4.86	□□□□□ -1.63
HIM1	YDR317W	SEC12	P11655	471 aa		4.86	□□□□□ -1.63
HIM1	YDR317W	PLC1	P32383	869 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms