RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	MIS1	P09440	975 aa	Known RBP	5.35	□□□□□ -1.55
NSE3	YDR288W	RPA135	P22138	1203 aa	Known RBP	5.35	□□□□□ -1.55
NSE3	YDR288W	SPO11	P23179	398 aa		5.35	□□□□□ -1.55
NSE3	YDR288W	YMC2	P38087	329 aa		5.35	□□□□□ -1.55
NSE3	YDR288W	LNP1	P38878	278 aa		5.35	□□□□□ -1.55
NSE3	YDR288W	STT3	P39007	718 aa	Known RBP	5.35	□□□□□ -1.55
NSE3	YDR288W	POL31	P46957	487 aa		5.35	□□□□□ -1.55
NSE3	YDR288W	COS12	P53053	380 aa		5.35	□□□□□ -1.55
NSE3	YDR288W	TRS31	Q03337	283 aa		5.35	□□□□□ -1.55
NSE3	YDR288W	APA1	P16550	321 aa	Known RBP	5.34	□□□□□ -1.55
NSE3	YDR288W	MCM3	P24279	971 aa	Known RBP	5.34	□□□□□ -1.55
NSE3	YDR288W	MUP3	P38734	546 aa		5.34	□□□□□ -1.55
NSE3	YDR288W	PMC1	P38929	1173 aa	Predicted RBP	5.34	□□□□□ -1.55
NSE3	YDR288W	YIL166C	P40445	542 aa		5.34	□□□□□ -1.55
NSE3	YDR288W	CAB2	P40506	365 aa		5.34	□□□□□ -1.55
NSE3	YDR288W	GFD1	Q04839	188 aa	Known RBP	5.34	□□□□□ -1.55
NSE3	YDR288W	IWR1	Q07532	353 aa	Predicted RBP	5.34	□□□□□ -1.55
NSE3	YDR288W	ZPS1	Q12512	249 aa		5.34	□□□□□ -1.55
NSE3	YDR288W	TPK2	P06245	380 aa		5.33	□□□□□ -1.56
NSE3	YDR288W	SIR1	P21691	654 aa		5.33	□□□□□ -1.56
NSE3	YDR288W	PRE2	P30656	287 aa	Known RBP	5.33	□□□□□ -1.56
NSE3	YDR288W	DBF20	P32328	564 aa		5.33	□□□□□ -1.56
NSE3	YDR288W	YPK1	P12688	680 aa	Known RBP	5.32	□□□□□ -1.56
NSE3	YDR288W	MSM1	P22438	575 aa		5.32	□□□□□ -1.56
NSE3	YDR288W	DPB3	P27344	201 aa		5.32	□□□□□ -1.56
NSE3	YDR288W	FUI1	P38196	639 aa		5.32	□□□□□ -1.56
NSE3	YDR288W	MIT1	P40002	666 aa		5.32	□□□□□ -1.56
NSE3	YDR288W	ASN1	P49089	572 aa	Known RBP	5.32	□□□□□ -1.56
NSE3	YDR288W	APM1	Q00776	475 aa	Predicted RBP	5.32	□□□□□ -1.56
NSE3	YDR288W	ATG21	Q02887	496 aa		5.32	□□□□□ -1.56
NSE3	YDR288W	USA1	Q03714	838 aa		5.32	□□□□□ -1.56
NSE3	YDR288W	BLS1	Q06071	122 aa		5.32	□□□□□ -1.56
NSE3	YDR288W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.32	□□□□□ -1.56	not detected
NSE3	YDR288W	WHI2	P12611	486 aa		5.31	□□□□□ -1.56
NSE3	YDR288W	RIT1	P23796	513 aa		5.31	□□□□□ -1.56
NSE3	YDR288W	MRPL9	P31334	269 aa		5.31	□□□□□ -1.56
NSE3	YDR288W	SWC3	P31376	625 aa		5.31	□□□□□ -1.56
NSE3	YDR288W	MRPL36	P36531	177 aa		5.31	□□□□□ -1.56
NSE3	YDR288W	SDH8	P38345	138 aa		5.31	□□□□□ -1.56
NSE3	YDR288W	SPC72	P39723	622 aa		5.31	□□□□□ -1.56
NSE3	YDR288W	YEL020C	P39994	560 aa		5.31	□□□□□ -1.56
NSE3	YDR288W	QRI1	P43123	477 aa	Known RBP	5.31	□□□□□ -1.56
NSE3	YDR288W	YGR021W	P53212	290 aa		5.31	□□□□□ -1.56
NSE3	YDR288W	COQ6	P53318	479 aa		5.31	□□□□□ -1.56
NSE3	YDR288W	CPR6	P53691	371 aa	Known RBP	5.31	□□□□□ -1.56
NSE3	YDR288W	RPS15	Q01855	142 aa	Known RBP	5.31	□□□□□ -1.56
NSE3	YDR288W	TRX2	P22803	104 aa	Known RBP	5.3	□□□□□ -1.56
NSE3	YDR288W	CLB4	P24871	460 aa		5.3	□□□□□ -1.56
NSE3	YDR288W	SAT4	P25333	603 aa	Known RBP	5.3	□□□□□ -1.56
NSE3	YDR288W	PRP45	P28004	379 aa	Predicted RBP	5.3	□□□□□ -1.56
NSE3	YDR288W	EMP70	P32802	667 aa		5.3	□□□□□ -1.56
NSE3	YDR288W	SAP185	P40856	1058 aa		5.3	□□□□□ -1.56
NSE3	YDR288W	CPR8	P53728	308 aa		5.3	□□□□□ -1.56
NSE3	YDR288W	YPL108W	Q02872	168 aa	Predicted RBP	5.3	□□□□□ -1.56
NSE3	YDR288W	CRF1	Q04930	467 aa		5.3	□□□□□ -1.56
NSE3	YDR288W	PSR2	Q07949	397 aa		5.3	□□□□□ -1.56
NSE3	YDR288W	CPA2	P03965	1118 aa	Known RBP	5.29	□□□□□ -1.56
NSE3	YDR288W	ADE3	P07245	946 aa	Known RBP	5.29	□□□□□ -1.56
NSE3	YDR288W	NUC1	P08466	329 aa		5.29	□□□□□ -1.56
NSE3	YDR288W	RNR3	P21672	869 aa	Known RBP	5.29	□□□□□ -1.56
NSE3	YDR288W	UGP1	P32861	499 aa	Known RBP	5.29	□□□□□ -1.56
NSE3	YDR288W	PPZ2	P33329	710 aa		5.29	□□□□□ -1.56
NSE3	YDR288W	MTG2	P38860	518 aa		5.29	□□□□□ -1.56
NSE3	YDR288W	RPT2	P40327	437 aa	Known RBP	5.29	□□□□□ -1.56
NSE3	YDR288W	PSF2	P40359	213 aa		5.29	□□□□□ -1.56
NSE3	YDR288W	SAP4	P53036	818 aa		5.29	□□□□□ -1.56
NSE3	YDR288W	AIM6	Q07716	390 aa		5.29	□□□□□ -1.56
NSE3	YDR288W	CRT10	Q08226	957 aa		5.29	□□□□□ -1.56
NSE3	YDR288W	ICL2	Q12031	575 aa		5.29	□□□□□ -1.56
NSE3	YDR288W	AAC1	P04710	309 aa		5.28	□□□□□ -1.56
NSE3	YDR288W	ADE5,7	P07244	802 aa	Known RBP	5.28	□□□□□ -1.56
NSE3	YDR288W	SWI4	P25302	1093 aa	Known RBP	5.28	□□□□□ -1.56
NSE3	YDR288W	GCD7	P32502	381 aa	Predicted RBP	5.28	□□□□□ -1.56
NSE3	YDR288W	CDC5	P32562	705 aa		5.28	□□□□□ -1.56
NSE3	YDR288W	ARB1	P40024	610 aa	Known RBP	5.28	□□□□□ -1.56
NSE3	YDR288W	IES5	P40060	125 aa		5.28	□□□□□ -1.56
NSE3	YDR288W	PUG1	P40100	303 aa		5.28	□□□□□ -1.56
NSE3	YDR288W	SKP2	P42843	763 aa		5.28	□□□□□ -1.56
NSE3	YDR288W	YGL117W	P53133	265 aa		5.28	□□□□□ -1.56
NSE3	YDR288W	MRPL13	Q02204	264 aa		5.28	□□□□□ -1.56
NSE3	YDR288W	EIS1	Q05050	843 aa	Known RBP	5.28	□□□□□ -1.56
NSE3	YDR288W	SLK19	Q08581	821 aa	Known RBP	5.28	□□□□□ -1.56
NSE3	YDR288W	YER175W-A	Q8TGU4	54 aa		5.28	□□□□□ -1.56
NSE3	YDR288W	FRD1	P32614	470 aa	Known RBP	5.27	□□□□□ -1.57
NSE3	YDR288W	SMK1	P41808	388 aa		5.27	□□□□□ -1.57
NSE3	YDR288W	ESF2	P53743	316 aa	Known RBP	5.27	□□□□□ -1.57
NSE3	YDR288W	WAR1	Q03631	944 aa		5.27	□□□□□ -1.57
NSE3	YDR288W	GIS1	Q03833	894 aa		5.27	□□□□□ -1.57
NSE3	YDR288W	SUT2	Q12286	268 aa		5.27	□□□□□ -1.57
NSE3	YDR288W	SSM4	P40318	1319 aa		5.26	□□□□□ -1.57
NSE3	YDR288W	YCR061W	P25639	631 aa		5.26	□□□□□ -1.57
NSE3	YDR288W	YPT10	P38146	199 aa		5.26	□□□□□ -1.57
NSE3	YDR288W	LAS21	P40367	830 aa		5.26	□□□□□ -1.57
NSE3	YDR288W	ERR3	P42222	437 aa		5.26	□□□□□ -1.57
NSE3	YDR288W	MRK1	P50873	501 aa		5.26	□□□□□ -1.57
NSE3	YDR288W	AAT1	Q01802	451 aa		5.26	□□□□□ -1.57
NSE3	YDR288W	FMP30	Q02883	468 aa		5.26	□□□□□ -1.57
NSE3	YDR288W	ULA1	Q12059	462 aa		5.26	□□□□□ -1.57
NSE3	YDR288W	ARP2	P32381	391 aa	Known RBP	5.25	□□□□□ -1.57
NSE3	YDR288W	FSH1	P38777	243 aa	Known RBP	5.25	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms