RNA–Protein interactions for RNA: YDR169C

STB3, Transcript of Ribosomal RNA processing element (RRPE)-binding protein, yeast

Gene STB3, Length 1,542 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STB3	YDR169C	ALG7	P07286	448 aa		5.18	□□□□□ -1.58
STB3	YDR169C	VMA2	P16140	517 aa	Known RBP	5.18	□□□□□ -1.58
STB3	YDR169C	RNR1	P21524	888 aa	Known RBP	5.18	□□□□□ -1.58
STB3	YDR169C	YJL163C	P46996	555 aa		5.18	□□□□□ -1.58
STB3	YDR169C	SPO1	P53541	631 aa		5.18	□□□□□ -1.58
STB3	YDR169C	GPD1	Q00055	391 aa	Known RBP	5.18	□□□□□ -1.58
STB3	YDR169C	TMA64	Q04600	565 aa	Known RBP	5.18	□□□□□ -1.58
STB3	YDR169C	ATG11	Q12527	1178 aa		5.18	□□□□□ -1.58
STB3	YDR169C	UBR2	Q07963	1872 aa		5.17	□□□□□ -1.58
STB3	YDR169C	RPS21A	P0C0V8	87 aa	Known RBP	5.17	□□□□□ -1.58
STB3	YDR169C	DAL5	P15365	543 aa		5.17	□□□□□ -1.58
STB3	YDR169C	IMG2	P25642	146 aa	Predicted RBP	5.17	□□□□□ -1.58
STB3	YDR169C	DAL3	P32459	195 aa		5.17	□□□□□ -1.58
STB3	YDR169C	TRZ1	P36159	838 aa	Predicted RBP	5.17	□□□□□ -1.58
STB3	YDR169C	GET2	P40056	285 aa		5.17	□□□□□ -1.58
STB3	YDR169C	BAP3	P41815	604 aa		5.17	□□□□□ -1.58
STB3	YDR169C	YFL040W	P43562	540 aa		5.17	□□□□□ -1.58
STB3	YDR169C	MNN11	P46985	422 aa	Known RBP	5.17	□□□□□ -1.58
STB3	YDR169C	COX18	P53239	316 aa		5.17	□□□□□ -1.58
STB3	YDR169C	REC102	Q02721	264 aa		5.17	□□□□□ -1.58
STB3	YDR169C	YHM2	Q04013	314 aa		5.17	□□□□□ -1.58
STB3	YDR169C	ADY4	Q05955	493 aa		5.17	□□□□□ -1.58
STB3	YDR169C	YLR407W	Q06070	228 aa		5.17	□□□□□ -1.58
STB3	YDR169C	ISA1	Q07821	250 aa	Predicted RBP	5.17	□□□□□ -1.58
STB3	YDR169C	ECM3	Q99252	613 aa		5.17	□□□□□ -1.58
STB3	YDR169C	RPP0	P05317	312 aa	Known RBP	5.16	□□□□□ -1.58
STB3	YDR169C	PPR1	P07272	904 aa	Predicted RBP	5.16	□□□□□ -1.58
STB3	YDR169C	PRE8	P23639	250 aa		5.16	□□□□□ -1.58
STB3	YDR169C	HIR1	P32479	840 aa		5.16	□□□□□ -1.58
STB3	YDR169C	GCD7	P32502	381 aa	Predicted RBP	5.16	□□□□□ -1.58
STB3	YDR169C	KSP1	P38691	1029 aa	Known RBP	5.16	□□□□□ -1.58
STB3	YDR169C	BCD1	P38772	366 aa		5.16	□□□□□ -1.58
STB3	YDR169C	YNG2	P38806	282 aa	Known RBP	5.16	□□□□□ -1.58
STB3	YDR169C	CHS7	P38843	316 aa		5.16	□□□□□ -1.58
STB3	YDR169C	FMO1	P38866	432 aa		5.16	□□□□□ -1.58
STB3	YDR169C	YMR147W	P40218	223 aa	Known RBP	5.16	□□□□□ -1.58
STB3	YDR169C	VPS27	P40343	622 aa	Known RBP	5.16	□□□□□ -1.58
STB3	YDR169C	ATG16	Q03818	150 aa		5.16	□□□□□ -1.58
STB3	YDR169C	CTK1	Q03957	528 aa	Known RBP	5.16	□□□□□ -1.58
STB3	YDR169C	NKP1	Q12493	238 aa		5.16	□□□□□ -1.58
STB3	YDR169C	TUS1	Q06412	1307 aa		5.16	□□□□□ -1.58
STB3	YDR169C	SWI6	P09959	803 aa		5.15	□□□□□ -1.58
STB3	YDR169C	SEC65	P29478	273 aa		5.15	□□□□□ -1.58
STB3	YDR169C	RGT1	P32862	1170 aa		5.15	□□□□□ -1.58
STB3	YDR169C	OAF3	P36023	863 aa		5.15	□□□□□ -1.58
STB3	YDR169C	FAT1	P38225	669 aa		5.15	□□□□□ -1.58
STB3	YDR169C	YIL092W	P40497	633 aa		5.15	□□□□□ -1.58
STB3	YDR169C	NOP9	P47077	666 aa	Known RBP	5.15	□□□□□ -1.58
STB3	YDR169C	BFA1	P47113	574 aa		5.15	□□□□□ -1.58
STB3	YDR169C	FMP30	Q02883	468 aa		5.15	□□□□□ -1.58
STB3	YDR169C	VPS36	Q06696	566 aa		5.15	□□□□□ -1.58
STB3	YDR169C	UTR4	P32626	227 aa		5.14	□□□□□ -1.59
STB3	YDR169C	HIS7	P33734	552 aa	Known RBP	5.14	□□□□□ -1.59
STB3	YDR169C	PPS1	P38148	807 aa		5.14	□□□□□ -1.59
STB3	YDR169C	SLI1	P53304	468 aa		5.14	□□□□□ -1.59
STB3	YDR169C	COG6	P53959	839 aa		5.14	□□□□□ -1.59
STB3	YDR169C	TGL2	P54857	326 aa		5.14	□□□□□ -1.59
STB3	YDR169C	RCR2	Q03446	210 aa	Known RBP	5.14	□□□□□ -1.59
STB3	YDR169C	YMR210W	Q03649	449 aa		5.14	□□□□□ -1.59
STB3	YDR169C	YMR206W	Q03695	313 aa		5.14	□□□□□ -1.59
STB3	YDR169C	VMS1	Q04311	632 aa	Known RBP	5.14	□□□□□ -1.59
STB3	YDR169C	YPS7	Q06325	596 aa		5.14	□□□□□ -1.59
STB3	YDR169C	BRE1	Q07457	700 aa	Known RBP	5.14	□□□□□ -1.59
STB3	YDR169C	SGO1	Q08490	590 aa		5.14	□□□□□ -1.59
STB3	YDR169C	HFI1	Q12060	488 aa		5.14	□□□□□ -1.59
STB3	YDR169C	RVB2	Q12464	471 aa	Known RBP	5.14	□□□□□ -1.59
STB3	YDR169C	SAM2	P19358	384 aa	Known RBP	5.13	□□□□□ -1.59
STB3	YDR169C	CHS3	P29465	1165 aa		5.13	□□□□□ -1.59
STB3	YDR169C	DID4	P36108	232 aa		5.13	□□□□□ -1.59
STB3	YDR169C	CCT3	P39077	534 aa	Known RBP	5.13	□□□□□ -1.59
STB3	YDR169C	FUN12	P39730	1002 aa	Known RBP	5.13	□□□□□ -1.59
STB3	YDR169C	UBC11	P52492	156 aa		5.13	□□□□□ -1.59
STB3	YDR169C	SCS3	P53012	380 aa		5.13	□□□□□ -1.59
STB3	YDR169C	YGL242C	P53066	181 aa		5.13	□□□□□ -1.59
STB3	YDR169C	YGR021W	P53212	290 aa		5.13	□□□□□ -1.59
STB3	YDR169C	SKG3	Q06315	1026 aa		5.13	□□□□□ -1.59
STB3	YDR169C	VHS3	Q08438	674 aa		5.13	□□□□□ -1.59
STB3	YDR169C	MPD2	Q99316	277 aa		5.13	□□□□□ -1.59
STB3	YDR169C	TOR2	P32600	2474 aa	Known RBP	5.13	□□□□□ -1.59
STB3	YDR169C	ATP4	P05626	244 aa		5.13	□□□□□ -1.59
STB3	YDR169C	SAM1	P10659	382 aa	Known RBP	5.13	□□□□□ -1.59
STB3	YDR169C	MVD1	P32377	396 aa	Known RBP	5.13	□□□□□ -1.59
STB3	YDR169C	MPE1	P35728	441 aa	Known RBP	5.13	□□□□□ -1.59
STB3	YDR169C	NUP60	P39705	539 aa		5.13	□□□□□ -1.59
STB3	YDR169C	NOC2	P39744	710 aa	Known RBP	5.13	□□□□□ -1.59
STB3	YDR169C	SKP2	P42843	763 aa		5.13	□□□□□ -1.59
STB3	YDR169C	IRC8	P47046	822 aa		5.13	□□□□□ -1.59
STB3	YDR169C	NOP15	P53927	220 aa	Predicted RBP	5.13	□□□□□ -1.59
STB3	YDR169C	PTA1	Q01329	785 aa	Predicted RBP	5.13	□□□□□ -1.59
STB3	YDR169C	GSF2	Q04697	403 aa	Known RBP	5.13	□□□□□ -1.59
STB3	YDR169C	COG4	Q06096	861 aa		5.13	□□□□□ -1.59
STB3	YDR169C	NCB2	Q92317	146 aa		5.13	□□□□□ -1.59
STB3	YDR169C	APM4	Q99186	491 aa		5.13	□□□□□ -1.59
STB3	YDR169C	GLN4	P13188	809 aa	Known RBP	5.12	□□□□□ -1.59
STB3	YDR169C	FRS1	P15624	595 aa	Known RBP	5.12	□□□□□ -1.59
STB3	YDR169C	YUR1	P26725	428 aa		5.12	□□□□□ -1.59
STB3	YDR169C	MOT1	P32333	1867 aa		5.12	□□□□□ -1.59
STB3	YDR169C	SHP1	P34223	423 aa		5.12	□□□□□ -1.59
STB3	YDR169C	YBR071W	P38243	211 aa		5.12	□□□□□ -1.59
STB3	YDR169C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 48.1 ms