RNA–Protein interactions for RNA: YDR088C

SLU7, Transcript of RNA splicing factor, yeast

Gene SLU7, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLU7	YDR088C	HOP1	P20050	605 aa		3.85	□□□□□ -1.79
SLU7	YDR088C	CBP3	P21560	335 aa		3.85	□□□□□ -1.79
SLU7	YDR088C	AAD3	P25612	363 aa		3.85	□□□□□ -1.79
SLU7	YDR088C	TGL1	P34163	548 aa		3.85	□□□□□ -1.79
SLU7	YDR088C	SAW1	P39735	261 aa		3.85	□□□□□ -1.79
SLU7	YDR088C	ASK10	P48361	1146 aa		3.85	□□□□□ -1.79
SLU7	YDR088C	PUS4	P48567	403 aa	Known RBP	3.85	□□□□□ -1.79
SLU7	YDR088C	MDR1	P53258	950 aa		3.85	□□□□□ -1.79
SLU7	YDR088C	EFR3	Q03653	782 aa	Known RBP	3.85	□□□□□ -1.79
SLU7	YDR088C	YOL114C	Q12322	202 aa		3.85	□□□□□ -1.79
SLU7	YDR088C	PET309	P32522	965 aa	Predicted RBP	3.84	□□□□□ -1.79
SLU7	YDR088C	STB5	P38699	743 aa		3.84	□□□□□ -1.79
SLU7	YDR088C	SWD1	P39706	426 aa		3.84	□□□□□ -1.79
SLU7	YDR088C	SSP120	P39931	234 aa	Known RBP	3.84	□□□□□ -1.79
SLU7	YDR088C	YEL025C	P39991	1188 aa		3.84	□□□□□ -1.79
SLU7	YDR088C	YIP4	P53093	235 aa		3.84	□□□□□ -1.79
SLU7	YDR088C	MOT3	P54785	490 aa	Known RBP	3.84	□□□□□ -1.79
SLU7	YDR088C	MFM1	Q02783	413 aa		3.84	□□□□□ -1.79
SLU7	YDR088C	NGL2	Q03264	515 aa	Known RBP	3.84	□□□□□ -1.79
SLU7	YDR088C	MLC2	Q06580	163 aa		3.84	□□□□□ -1.79
SLU7	YDR088C	HOS1	Q12214	470 aa		3.84	□□□□□ -1.79
SLU7	YDR088C	VAS1	P07806	1104 aa	Known RBP	3.83	□□□□□ -1.8
SLU7	YDR088C	VPS33	P20795	691 aa		3.83	□□□□□ -1.8
SLU7	YDR088C	YJL193W	P39542	402 aa		3.83	□□□□□ -1.8
SLU7	YDR088C	TPM2	P40414	161 aa		3.83	□□□□□ -1.8
SLU7	YDR088C	QRI7	P43122	407 aa		3.83	□□□□□ -1.8
SLU7	YDR088C	MAD3	P47074	515 aa		3.83	□□□□□ -1.8
SLU7	YDR088C	FRE7	Q12333	620 aa		3.83	□□□□□ -1.8
SLU7	YDR088C	ARP7	Q12406	477 aa		3.83	□□□□□ -1.8
SLU7	YDR088C	MSS18	P08593	268 aa		3.82	□□□□□ -1.8
SLU7	YDR088C	PTP2	P29461	750 aa		3.82	□□□□□ -1.8
SLU7	YDR088C	DSS4	P32601	143 aa		3.82	□□□□□ -1.8
SLU7	YDR088C	ECM32	P32644	1121 aa	Known RBP	3.82	□□□□□ -1.8
SLU7	YDR088C	SDS22	P36047	338 aa		3.82	□□□□□ -1.8
SLU7	YDR088C	YKL133C	P36066	463 aa		3.82	□□□□□ -1.8
SLU7	YDR088C	HIS6	P40545	261 aa		3.82	□□□□□ -1.8
SLU7	YDR088C	GSM1	P42950	618 aa		3.82	□□□□□ -1.8
SLU7	YDR088C	BUD17	P53727	317 aa		3.82	□□□□□ -1.8
SLU7	YDR088C	ACS1	Q01574	713 aa		3.82	□□□□□ -1.8
SLU7	YDR088C	RPS15	Q01855	142 aa	Known RBP	3.82	□□□□□ -1.8
SLU7	YDR088C	ORM2	Q06144	216 aa		3.82	□□□□□ -1.8
SLU7	YDR088C	BRE1	Q07457	700 aa	Known RBP	3.82	□□□□□ -1.8
SLU7	YDR088C	TUF1	P02992	437 aa	Known RBP	3.81	□□□□□ -1.8
SLU7	YDR088C	APA1	P16550	321 aa	Known RBP	3.81	□□□□□ -1.8
SLU7	YDR088C	DHR2	P36009	735 aa	Predicted RBP	3.81	□□□□□ -1.8
SLU7	YDR088C	YGL117W	P53133	265 aa		3.81	□□□□□ -1.8
SLU7	YDR088C	RTS3	P53289	263 aa		3.81	□□□□□ -1.8
SLU7	YDR088C	HIM1	Q06674	414 aa		3.81	□□□□□ -1.8
SLU7	YDR088C	YHL041W	P38730	149 aa		3.8	□□□□□ -1.8
SLU7	YDR088C	TAN1	P53072	289 aa	Predicted RBP	3.8	□□□□□ -1.8
SLU7	YDR088C	TEP1	P53916	434 aa		3.8	□□□□□ -1.8
SLU7	YDR088C	CEF1	Q03654	590 aa	Predicted RBP	3.8	□□□□□ -1.8
SLU7	YDR088C	TRI1	Q05024	226 aa		3.8	□□□□□ -1.8
SLU7	YDR088C	ENT2	Q05785	613 aa		3.8	□□□□□ -1.8
SLU7	YDR088C	SEC12	P11655	471 aa		3.79	□□□□□ -1.8
SLU7	YDR088C	RPS7A	P26786	190 aa	Known RBP	3.79	□□□□□ -1.8
SLU7	YDR088C	CNE1	P27825	502 aa		3.79	□□□□□ -1.8
SLU7	YDR088C	CAP1	P28495	268 aa	Known RBP	3.79	□□□□□ -1.8
SLU7	YDR088C	APM3	P38153	483 aa		3.79	□□□□□ -1.8
SLU7	YDR088C	YLF2	P38746	405 aa		3.79	□□□□□ -1.8
SLU7	YDR088C	SPC72	P39723	622 aa		3.79	□□□□□ -1.8
SLU7	YDR088C	COS12	P53053	380 aa		3.79	□□□□□ -1.8
SLU7	YDR088C	DAK1	P54838	584 aa	Known RBP	3.79	□□□□□ -1.8
SLU7	YDR088C	TRS31	Q03337	283 aa		3.79	□□□□□ -1.8
SLU7	YDR088C	USA1	Q03714	838 aa		3.79	□□□□□ -1.8
SLU7	YDR088C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.79	□□□□□ -1.8	not detected
SLU7	YDR088C	YPL216W	Q08964	1102 aa		3.79	□□□□□ -1.8
SLU7	YDR088C	RRP6	Q12149	733 aa	Known RBP	3.79	□□□□□ -1.8
SLU7	YDR088C	LEU2	P04173	364 aa	Predicted RBP	3.78	□□□□□ -1.8
SLU7	YDR088C	PGI1	P12709	554 aa	Known RBP	3.78	□□□□□ -1.8
SLU7	YDR088C	SEC18	P18759	758 aa	Known RBP	3.78	□□□□□ -1.8
SLU7	YDR088C	PRE2	P30656	287 aa	Known RBP	3.78	□□□□□ -1.8
SLU7	YDR088C	RIM4	P38741	713 aa		3.78	□□□□□ -1.8
SLU7	YDR088C	STT3	P39007	718 aa	Known RBP	3.78	□□□□□ -1.8
SLU7	YDR088C	NOP2	P40991	618 aa	Known RBP	3.78	□□□□□ -1.8
SLU7	YDR088C	POL31	P46957	487 aa		3.78	□□□□□ -1.8
SLU7	YDR088C	IRC8	P47046	822 aa		3.78	□□□□□ -1.8
SLU7	YDR088C	SAP4	P53036	818 aa		3.78	□□□□□ -1.8
SLU7	YDR088C	ATP23	P53722	227 aa		3.78	□□□□□ -1.8
SLU7	YDR088C	CPR8	P53728	308 aa		3.78	□□□□□ -1.8
SLU7	YDR088C	UBX4	P54730	416 aa		3.78	□□□□□ -1.8
SLU7	YDR088C	AAD4	Q07747	329 aa		3.78	□□□□□ -1.8
SLU7	YDR088C	SWI4	P25302	1093 aa	Known RBP	3.77	□□□□□ -1.81
SLU7	YDR088C	FRD1	P32614	470 aa	Known RBP	3.77	□□□□□ -1.81
SLU7	YDR088C	BEM3	P32873	1128 aa		3.77	□□□□□ -1.81
SLU7	YDR088C	CCL1	P37366	393 aa		3.77	□□□□□ -1.81
SLU7	YDR088C	TAF5	P38129	798 aa		3.77	□□□□□ -1.81
SLU7	YDR088C	YPT10	P38146	199 aa		3.77	□□□□□ -1.81
SLU7	YDR088C	THI6	P41835	540 aa		3.77	□□□□□ -1.81
SLU7	YDR088C	BET2	P20133	325 aa		3.76	□□□□□ -1.81
SLU7	YDR088C	PRP45	P28004	379 aa	Predicted RBP	3.76	□□□□□ -1.81
SLU7	YDR088C	VFA1	P40080	203 aa		3.76	□□□□□ -1.81
SLU7	YDR088C	RPT2	P40327	437 aa	Known RBP	3.76	□□□□□ -1.81
SLU7	YDR088C	EIS1	Q05050	843 aa	Known RBP	3.76	□□□□□ -1.81
SLU7	YDR088C	PCL8	Q08966	492 aa		3.76	□□□□□ -1.81
SLU7	YDR088C	PRS5	Q12265	496 aa	Known RBP	3.76	□□□□□ -1.81
SLU7	YDR088C	CPA2	P03965	1118 aa	Known RBP	3.75	□□□□□ -1.81
SLU7	YDR088C	YPK1	P12688	680 aa	Known RBP	3.75	□□□□□ -1.81
SLU7	YDR088C	RNR3	P21672	869 aa	Known RBP	3.75	□□□□□ -1.81
SLU7	YDR088C	SIR1	P21691	654 aa		3.75	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 228 ms