RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHP1	YBL058W	AMS1	P22855	1083 aa		6.09	□□□□□ -1.43
SHP1	YBL058W	YIH1	P25637	258 aa		6.09	□□□□□ -1.43
SHP1	YBL058W	KIP2	P28743	706 aa		6.09	□□□□□ -1.43
SHP1	YBL058W	SFP1	P32432	683 aa		6.09	□□□□□ -1.43
SHP1	YBL058W	SEC6	P32844	805 aa		6.09	□□□□□ -1.43
SHP1	YBL058W	YET1	P35723	206 aa		6.09	□□□□□ -1.43
SHP1	YBL058W	BST1	P43571	1029 aa		6.09	□□□□□ -1.43
SHP1	YBL058W	DUG1	P43616	481 aa	Known RBP	6.09	□□□□□ -1.43
SHP1	YBL058W	COQ5	P49017	307 aa		6.09	□□□□□ -1.43
SHP1	YBL058W	PUS2	P53167	370 aa		6.09	□□□□□ -1.43
SHP1	YBL058W	MRX10	Q05648	414 aa		6.09	□□□□□ -1.43
SHP1	YBL058W	PEX15	Q08215	383 aa		6.09	□□□□□ -1.43
SHP1	YBL058W	CWC2	Q12046	339 aa	Predicted RBP	6.09	□□□□□ -1.43
SHP1	YBL058W	APC11	Q12157	165 aa		6.09	□□□□□ -1.43
SHP1	YBL058W	COX3	P00420	269 aa		6.08	□□□□□ -1.44
SHP1	YBL058W	SNF5	P18480	905 aa		6.08	□□□□□ -1.44
SHP1	YBL058W	ABD1	P32783	436 aa	Predicted RBP	6.08	□□□□□ -1.44
SHP1	YBL058W	SRB2	P34162	210 aa		6.08	□□□□□ -1.44
SHP1	YBL058W	TRZ1	P36159	838 aa	Predicted RBP	6.08	□□□□□ -1.44
SHP1	YBL058W	ADE17	P38009	592 aa	Known RBP	6.08	□□□□□ -1.44
SHP1	YBL058W	UME6	P39001	836 aa		6.08	□□□□□ -1.44
SHP1	YBL058W	YER189W	P40104	122 aa		6.08	□□□□□ -1.44
SHP1	YBL058W	CNN1	P43618	361 aa		6.08	□□□□□ -1.44
SHP1	YBL058W	TAN1	P53072	289 aa	Predicted RBP	6.08	□□□□□ -1.44
SHP1	YBL058W	ESBP6	P53918	673 aa		6.08	□□□□□ -1.44
SHP1	YBL058W	KTR6	P54070	446 aa		6.08	□□□□□ -1.44
SHP1	YBL058W	INA17	Q02888	182 aa		6.08	□□□□□ -1.44
SHP1	YBL058W	THI20	Q08224	551 aa		6.08	□□□□□ -1.44
SHP1	YBL058W	SAM4	Q08985	325 aa	Known RBP	6.08	□□□□□ -1.44
SHP1	YBL058W	VMA4	P22203	233 aa	Known RBP	6.07	□□□□□ -1.44
SHP1	YBL058W	PUP1	P25043	261 aa		6.07	□□□□□ -1.44
SHP1	YBL058W	ERG6	P25087	383 aa	Known RBP	6.07	□□□□□ -1.44
SHP1	YBL058W	GSY2	P27472	705 aa		6.07	□□□□□ -1.44
SHP1	YBL058W	PXA2	P34230	853 aa		6.07	□□□□□ -1.44
SHP1	YBL058W	NPR3	P38742	1146 aa		6.07	□□□□□ -1.44
SHP1	YBL058W	YHR078W	P38799	552 aa		6.07	□□□□□ -1.44
SHP1	YBL058W	VAC8	P39968	578 aa		6.07	□□□□□ -1.44
SHP1	YBL058W	SUM1	P46676	1062 aa		6.07	□□□□□ -1.44
SHP1	YBL058W	AMA1	P50082	593 aa		6.07	□□□□□ -1.44
SHP1	YBL058W	ARA2	Q04212	335 aa		6.07	□□□□□ -1.44
SHP1	YBL058W	GFD1	Q04839	188 aa	Known RBP	6.07	□□□□□ -1.44
SHP1	YBL058W	YDL073W	Q07454	984 aa		6.07	□□□□□ -1.44
SHP1	YBL058W	OPI10	Q08202	246 aa		6.07	□□□□□ -1.44
SHP1	YBL058W	YOR059C	Q08448	450 aa	Known RBP	6.07	□□□□□ -1.44
SHP1	YBL058W	CIR2	Q08822	631 aa		6.07	□□□□□ -1.44
SHP1	YBL058W	YLR046C	Q12253	270 aa		6.07	□□□□□ -1.44
SHP1	YBL058W	UBR1	P19812	1950 aa		6.06	□□□□□ -1.44
SHP1	YBL058W	KAR3	P17119	729 aa		6.06	□□□□□ -1.44
SHP1	YBL058W	MET16	P18408	261 aa	Predicted RBP	6.06	□□□□□ -1.44
SHP1	YBL058W	PMI40	P29952	429 aa	Known RBP	6.06	□□□□□ -1.44
SHP1	YBL058W	CDC3	P32457	520 aa	Known RBP	6.06	□□□□□ -1.44
SHP1	YBL058W	NIP100	P33420	868 aa		6.06	□□□□□ -1.44
SHP1	YBL058W	PXL1	P36166	706 aa		6.06	□□□□□ -1.44
SHP1	YBL058W	SOH1	P38633	127 aa		6.06	□□□□□ -1.44
SHP1	YBL058W	LTP1	P40347	161 aa		6.06	□□□□□ -1.44
SHP1	YBL058W	ASG1	P40467	964 aa		6.06	□□□□□ -1.44
SHP1	YBL058W	EMC4	P53073	190 aa		6.06	□□□□□ -1.44
SHP1	YBL058W	ELP3	Q02908	557 aa	Known RBP	6.06	□□□□□ -1.44
SHP1	YBL058W	PIR1	Q03178	341 aa		6.06	□□□□□ -1.44
SHP1	YBL058W	RPC11	Q04307	110 aa	Predicted RBP	6.06	□□□□□ -1.44
SHP1	YBL058W	ETT1	Q08421	412 aa	Known RBP	6.06	□□□□□ -1.44
SHP1	YBL058W	RPN8	Q08723	338 aa	Known RBP	6.06	□□□□□ -1.44
SHP1	YBL058W	APL5	Q08951	932 aa	Known RBP	6.06	□□□□□ -1.44
SHP1	YBL058W	NAG1	Q8TGN9	163 aa		6.06	□□□□□ -1.44
SHP1	YBL058W	BI2	P03873	423 aa		6.05	□□□□□ -1.44
SHP1	YBL058W	DAL81	P21657	970 aa		6.05	□□□□□ -1.44
SHP1	YBL058W	GEX1	P25596	615 aa		6.05	□□□□□ -1.44
SHP1	YBL058W	YKL151C	P36059	337 aa		6.05	□□□□□ -1.44
SHP1	YBL058W	GEX2	P36173	615 aa		6.05	□□□□□ -1.44
SHP1	YBL058W	PSY4	P38193	441 aa		6.05	□□□□□ -1.44
SHP1	YBL058W	EXO5	P38289	585 aa		6.05	□□□□□ -1.44
SHP1	YBL058W	MIP6	P38760	659 aa	Known RBP	6.05	□□□□□ -1.44
SHP1	YBL058W	ERV46	P39727	415 aa		6.05	□□□□□ -1.44
SHP1	YBL058W	YGL140C	P53120	1219 aa		6.05	□□□□□ -1.44
SHP1	YBL058W	PEX31	P53203	462 aa		6.05	□□□□□ -1.44
SHP1	YBL058W	DOS2	P54858	310 aa		6.05	□□□□□ -1.44
SHP1	YBL058W	NAM8	Q00539	523 aa	Known RBP	6.05	□□□□□ -1.44
SHP1	YBL058W	AAD4	Q07747	329 aa		6.05	□□□□□ -1.44
SHP1	YBL058W	AIM39	Q08223	395 aa		6.05	□□□□□ -1.44
SHP1	YBL058W	TMA16	Q08687	178 aa		6.05	□□□□□ -1.44
SHP1	YBL058W	BI3	Q9ZZW7	517 aa		6.05	□□□□□ -1.44
SHP1	YBL058W	HFA1	P32874	2273 aa		6.05	□□□□□ -1.44
SHP1	YBL058W	MIS1	P09440	975 aa	Known RBP	6.04	□□□□□ -1.44
SHP1	YBL058W	PUT4	P15380	627 aa		6.04	□□□□□ -1.44
SHP1	YBL058W	RRN6	P32786	894 aa		6.04	□□□□□ -1.44
SHP1	YBL058W	SMC1	P32908	1225 aa		6.04	□□□□□ -1.44
SHP1	YBL058W	WBP1	P33767	430 aa	Known RBP	6.04	□□□□□ -1.44
SHP1	YBL058W	RRM3	P38766	723 aa		6.04	□□□□□ -1.44
SHP1	YBL058W	SPT8	P38915	602 aa		6.04	□□□□□ -1.44
SHP1	YBL058W	PRM9	P39551	298 aa		6.04	□□□□□ -1.44
SHP1	YBL058W	STL1	P39932	569 aa		6.04	□□□□□ -1.44
SHP1	YBL058W	EDC3	P39998	551 aa	Known RBP	6.04	□□□□□ -1.44
SHP1	YBL058W	SNZ3	P43545	298 aa		6.04	□□□□□ -1.44
SHP1	YBL058W	FET5	P43561	622 aa		6.04	□□□□□ -1.44
SHP1	YBL058W	SNG1	P46950	547 aa		6.04	□□□□□ -1.44
SHP1	YBL058W	TAD1	P53065	400 aa		6.04	□□□□□ -1.44
SHP1	YBL058W	YGR283C	P53336	341 aa	Predicted RBP	6.04	□□□□□ -1.44
SHP1	YBL058W	SUN4	P53616	420 aa		6.04	□□□□□ -1.44
SHP1	YBL058W	YNR063W	P53749	607 aa		6.04	□□□□□ -1.44
SHP1	YBL058W	SNO2	P53823	222 aa		6.04	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 41.1 ms