RNA–Protein interactions for RNA: RDN18-2

RDN18-2, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-2, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-2RDN18-2 FMN1Q03778 218 aa10.49□□□□□ -0.73
RDN18-2RDN18-2 DDC1Q08949 612 aa10.49□□□□□ -0.73
RDN18-2RDN18-2 SUT2Q12286 268 aa10.49□□□□□ -0.73
RDN18-2RDN18-2 CIT2P08679 460 aa10.49□□□□□ -0.73
RDN18-2RDN18-2 GPA2P10823 449 aa10.49□□□□□ -0.73
RDN18-2RDN18-2 AMS1P22855 1083 aa10.49□□□□□ -0.73
RDN18-2RDN18-2 SWH1P35845 1188 aa10.49□□□□□ -0.73
RDN18-2RDN18-2 CHS6P40955 746 aa10.49□□□□□ -0.73
RDN18-2RDN18-2 MAD3P47074 515 aa10.49□□□□□ -0.73
RDN18-2RDN18-2 YJR107WP47145 328 aa10.49□□□□□ -0.73
RDN18-2RDN18-2 USE1P53146 245 aa10.49□□□□□ -0.73
RDN18-2RDN18-2 KTR6P54070 446 aa10.49□□□□□ -0.73
RDN18-2RDN18-2 LGE1Q02796 332 aaKnown RBP10.49□□□□□ -0.73
RDN18-2RDN18-2 YMR209CQ03648 457 aa10.49□□□□□ -0.73
RDN18-2RDN18-2 NOT5Q12514 560 aaPredicted RBP10.49□□□□□ -0.73
RDN18-2RDN18-2 VPS3P23643 1011 aa10.48□□□□□ -0.73
RDN18-2RDN18-2 SEC14P24280 304 aaKnown RBP10.48□□□□□ -0.73
RDN18-2RDN18-2 PMI40P29952 429 aaKnown RBP10.48□□□□□ -0.73
RDN18-2RDN18-2 TOA1P32773 286 aa10.48□□□□□ -0.73
RDN18-2RDN18-2 KDX1P36005 433 aa10.48□□□□□ -0.73
RDN18-2RDN18-2 YBR053CP38235 358 aa10.48□□□□□ -0.73
RDN18-2RDN18-2 ATM1P40416 690 aa10.48□□□□□ -0.73
RDN18-2RDN18-2 GTB1Q04924 702 aa10.48□□□□□ -0.73
RDN18-2RDN18-2 RNA1P11745 407 aaKnown RBP10.47□□□□□ -0.73
RDN18-2RDN18-2 HSP78P33416 811 aa10.47□□□□□ -0.73
RDN18-2RDN18-2 BIT2P38346 545 aa10.47□□□□□ -0.73
RDN18-2RDN18-2 OTU2P38747 307 aaKnown RBP10.47□□□□□ -0.73
RDN18-2RDN18-2 ETP1P38748 585 aaKnown RBP10.47□□□□□ -0.73
RDN18-2RDN18-2 YAT2P40017 923 aa10.47□□□□□ -0.73
RDN18-2RDN18-2 FAR3P46671 204 aa10.47□□□□□ -0.73
RDN18-2RDN18-2 TAF1P46677 1066 aa10.47□□□□□ -0.73
RDN18-2RDN18-2 CCT8P47079 568 aaKnown RBP10.47□□□□□ -0.73
RDN18-2RDN18-2 NRT1Q08485 598 aa10.47□□□□□ -0.73
RDN18-2RDN18-2 EXO70P19658 623 aa10.47□□□□□ -0.73
RDN18-2RDN18-2 REC107P21651 314 aa10.47□□□□□ -0.73
RDN18-2RDN18-2 RIM2P38127 377 aa10.47□□□□□ -0.73
RDN18-2RDN18-2 SSP120P39931 234 aaKnown RBP10.47□□□□□ -0.73
RDN18-2RDN18-2 UTP8P53276 713 aaKnown RBP10.47□□□□□ -0.73
RDN18-2RDN18-2 SPC98P53540 846 aa10.47□□□□□ -0.73
RDN18-2RDN18-2 OSH6Q02201 448 aa10.47□□□□□ -0.73
RDN18-2RDN18-2 RCR2Q03446 210 aaKnown RBP10.47□□□□□ -0.73
RDN18-2RDN18-2 REC8Q12188 680 aa10.47□□□□□ -0.73
RDN18-2RDN18-2 MRM1P25270 412 aa10.46□□□□□ -0.74
RDN18-2RDN18-2 SNT1P25357 1226 aa10.46□□□□□ -0.74
RDN18-2RDN18-2 HEM3P28789 327 aa10.46□□□□□ -0.74
RDN18-2RDN18-2 PHO89P38361 574 aa10.46□□□□□ -0.74
RDN18-2RDN18-2 ALD5P40047 520 aaKnown RBP10.46□□□□□ -0.74
RDN18-2RDN18-2 SUM1P46676 1062 aa10.46□□□□□ -0.74
RDN18-2RDN18-2 IML2P47031 731 aa10.46□□□□□ -0.74
RDN18-2RDN18-2 NUT1P53114 1132 aa10.46□□□□□ -0.74
RDN18-2RDN18-2 ERP6P53198 216 aa10.46□□□□□ -0.74
RDN18-2RDN18-2 PEX31P53203 462 aa10.46□□□□□ -0.74
RDN18-2RDN18-2 YNL144CP53907 740 aa10.46□□□□□ -0.74
RDN18-2RDN18-2 ARA2Q04212 335 aa10.46□□□□□ -0.74
RDN18-2RDN18-2 ARP9Q05123 467 aa10.46□□□□□ -0.74
RDN18-2RDN18-2 SLD7Q08457 257 aa10.46□□□□□ -0.74
RDN18-2RDN18-2 GAL80P04387 435 aa10.45□□□□□ -0.74
RDN18-2RDN18-2 SLA2P33338 968 aa10.45□□□□□ -0.74
RDN18-2RDN18-2 SHE3P38272 425 aaKnown RBP10.45□□□□□ -0.74
RDN18-2RDN18-2 CDC1P40986 491 aa10.45□□□□□ -0.74
RDN18-2RDN18-2 ALT2P52892 507 aa10.45□□□□□ -0.74
RDN18-2RDN18-2 VPS9P54787 451 aa10.45□□□□□ -0.74
RDN18-2RDN18-2 ATP25Q03153 612 aa10.45□□□□□ -0.74
RDN18-2RDN18-2 ADY3Q07732 790 aa10.45□□□□□ -0.74
RDN18-2RDN18-2 APC9Q12107 265 aa10.45□□□□□ -0.74
RDN18-2RDN18-2 KCS1Q12494 1050 aa10.45□□□□□ -0.74
RDN18-2RDN18-2 EFG1Q3E705 233 aaKnown RBP10.45□□□□□ -0.74
RDN18-2RDN18-2 SPS22P25380 463 aa10.44□□□□□ -0.74
RDN18-2RDN18-2 YCL068CP25593 260 aa10.44□□□□□ -0.74
RDN18-2RDN18-2 GDA1P32621 518 aa10.44□□□□□ -0.74
RDN18-2RDN18-2 SEC6P32844 805 aa10.44□□□□□ -0.74
RDN18-2RDN18-2 SIP2P34164 415 aaKnown RBP10.44□□□□□ -0.74
RDN18-2RDN18-2 RRP14P36080 434 aaKnown RBP10.44□□□□□ -0.74
RDN18-2RDN18-2 MDJ2P42834 146 aa10.44□□□□□ -0.74
RDN18-2RDN18-2 GPN2Q08726 347 aaPredicted RBP10.44□□□□□ -0.74
RDN18-2RDN18-2 NBP2Q12163 236 aa10.44□□□□□ -0.74
RDN18-2RDN18-2 YMR030W-AQ3E760 96 aa10.44□□□□□ -0.74
RDN18-2RDN18-2 MRM2P53123 320 aa10.44□□□□□ -0.74
RDN18-2RDN18-2 HRD3Q05787 833 aa10.44□□□□□ -0.74
RDN18-2RDN18-2 AAD4Q07747 329 aa10.44□□□□□ -0.74
RDN18-2RDN18-2 TMA46Q12000 345 aaKnown RBP10.44□□□□□ -0.74
RDN18-2RDN18-2 GPM2Q12008 311 aa10.44□□□□□ -0.74
RDN18-2RDN18-2 YOR131CQ12486 218 aa10.44□□□□□ -0.74
RDN18-2RDN18-2 RAD14P28519 371 aa10.43□□□□□ -0.74
RDN18-2RDN18-2 SRP101P32916 621 aa10.43□□□□□ -0.74
RDN18-2RDN18-2 YHL008CP38750 627 aa10.43□□□□□ -0.74
RDN18-2RDN18-2 FSH1P38777 243 aaKnown RBP10.43□□□□□ -0.74
RDN18-2RDN18-2 MGS1P40151 587 aa10.43□□□□□ -0.74
RDN18-2RDN18-2 ALG5P40350 334 aa10.43□□□□□ -0.74
RDN18-2RDN18-2 MNN11P46985 422 aaKnown RBP10.43□□□□□ -0.74
RDN18-2RDN18-2 BUD32P53323 261 aa10.43□□□□□ -0.74
RDN18-2RDN18-2 LCB5Q06147 687 aaKnown RBP10.43□□□□□ -0.74
RDN18-2RDN18-2 DIA2Q08496 732 aaPredicted RBP10.43□□□□□ -0.74
RDN18-2RDN18-2 PUF2Q12221 1075 aaKnown RBP RIP-Chip data10.43□□□□□ -0.74not detected
RDN18-2RDN18-2 RGS2Q99188 309 aa10.43□□□□□ -0.74
RDN18-2RDN18-2 MET16P18408 261 aaPredicted RBP10.42□□□□□ -0.74
RDN18-2RDN18-2 TKL2P33315 681 aa10.42□□□□□ -0.74
RDN18-2RDN18-2 YBR056WP38081 501 aa10.42□□□□□ -0.74
RDN18-2RDN18-2 RDH54P38086 958 aa10.42□□□□□ -0.74
RDN18-2RDN18-2 PRM9P39551 298 aa10.42□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 57.4 ms