RNA–Protein interactions for RNA: RDN18-1

RDN18-1, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-1, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-1RDN18-1 FMN1Q03778 218 aa10.49□□□□□ -0.73
RDN18-1RDN18-1 DDC1Q08949 612 aa10.49□□□□□ -0.73
RDN18-1RDN18-1 SUT2Q12286 268 aa10.49□□□□□ -0.73
RDN18-1RDN18-1 CIT2P08679 460 aa10.49□□□□□ -0.73
RDN18-1RDN18-1 GPA2P10823 449 aa10.49□□□□□ -0.73
RDN18-1RDN18-1 AMS1P22855 1083 aa10.49□□□□□ -0.73
RDN18-1RDN18-1 SWH1P35845 1188 aa10.49□□□□□ -0.73
RDN18-1RDN18-1 CHS6P40955 746 aa10.49□□□□□ -0.73
RDN18-1RDN18-1 MAD3P47074 515 aa10.49□□□□□ -0.73
RDN18-1RDN18-1 YJR107WP47145 328 aa10.49□□□□□ -0.73
RDN18-1RDN18-1 USE1P53146 245 aa10.49□□□□□ -0.73
RDN18-1RDN18-1 KTR6P54070 446 aa10.49□□□□□ -0.73
RDN18-1RDN18-1 LGE1Q02796 332 aaKnown RBP10.49□□□□□ -0.73
RDN18-1RDN18-1 YMR209CQ03648 457 aa10.49□□□□□ -0.73
RDN18-1RDN18-1 NOT5Q12514 560 aaPredicted RBP10.49□□□□□ -0.73
RDN18-1RDN18-1 VPS3P23643 1011 aa10.48□□□□□ -0.73
RDN18-1RDN18-1 SEC14P24280 304 aaKnown RBP10.48□□□□□ -0.73
RDN18-1RDN18-1 PMI40P29952 429 aaKnown RBP10.48□□□□□ -0.73
RDN18-1RDN18-1 TOA1P32773 286 aa10.48□□□□□ -0.73
RDN18-1RDN18-1 KDX1P36005 433 aa10.48□□□□□ -0.73
RDN18-1RDN18-1 YBR053CP38235 358 aa10.48□□□□□ -0.73
RDN18-1RDN18-1 ATM1P40416 690 aa10.48□□□□□ -0.73
RDN18-1RDN18-1 GTB1Q04924 702 aa10.48□□□□□ -0.73
RDN18-1RDN18-1 RNA1P11745 407 aaKnown RBP10.47□□□□□ -0.73
RDN18-1RDN18-1 HSP78P33416 811 aa10.47□□□□□ -0.73
RDN18-1RDN18-1 BIT2P38346 545 aa10.47□□□□□ -0.73
RDN18-1RDN18-1 OTU2P38747 307 aaKnown RBP10.47□□□□□ -0.73
RDN18-1RDN18-1 ETP1P38748 585 aaKnown RBP10.47□□□□□ -0.73
RDN18-1RDN18-1 YAT2P40017 923 aa10.47□□□□□ -0.73
RDN18-1RDN18-1 FAR3P46671 204 aa10.47□□□□□ -0.73
RDN18-1RDN18-1 TAF1P46677 1066 aa10.47□□□□□ -0.73
RDN18-1RDN18-1 CCT8P47079 568 aaKnown RBP10.47□□□□□ -0.73
RDN18-1RDN18-1 NRT1Q08485 598 aa10.47□□□□□ -0.73
RDN18-1RDN18-1 EXO70P19658 623 aa10.47□□□□□ -0.73
RDN18-1RDN18-1 REC107P21651 314 aa10.47□□□□□ -0.73
RDN18-1RDN18-1 RIM2P38127 377 aa10.47□□□□□ -0.73
RDN18-1RDN18-1 SSP120P39931 234 aaKnown RBP10.47□□□□□ -0.73
RDN18-1RDN18-1 UTP8P53276 713 aaKnown RBP10.47□□□□□ -0.73
RDN18-1RDN18-1 SPC98P53540 846 aa10.47□□□□□ -0.73
RDN18-1RDN18-1 OSH6Q02201 448 aa10.47□□□□□ -0.73
RDN18-1RDN18-1 RCR2Q03446 210 aaKnown RBP10.47□□□□□ -0.73
RDN18-1RDN18-1 REC8Q12188 680 aa10.47□□□□□ -0.73
RDN18-1RDN18-1 MRM1P25270 412 aa10.46□□□□□ -0.74
RDN18-1RDN18-1 SNT1P25357 1226 aa10.46□□□□□ -0.74
RDN18-1RDN18-1 HEM3P28789 327 aa10.46□□□□□ -0.74
RDN18-1RDN18-1 PHO89P38361 574 aa10.46□□□□□ -0.74
RDN18-1RDN18-1 ALD5P40047 520 aaKnown RBP10.46□□□□□ -0.74
RDN18-1RDN18-1 SUM1P46676 1062 aa10.46□□□□□ -0.74
RDN18-1RDN18-1 IML2P47031 731 aa10.46□□□□□ -0.74
RDN18-1RDN18-1 NUT1P53114 1132 aa10.46□□□□□ -0.74
RDN18-1RDN18-1 ERP6P53198 216 aa10.46□□□□□ -0.74
RDN18-1RDN18-1 PEX31P53203 462 aa10.46□□□□□ -0.74
RDN18-1RDN18-1 YNL144CP53907 740 aa10.46□□□□□ -0.74
RDN18-1RDN18-1 ARA2Q04212 335 aa10.46□□□□□ -0.74
RDN18-1RDN18-1 ARP9Q05123 467 aa10.46□□□□□ -0.74
RDN18-1RDN18-1 SLD7Q08457 257 aa10.46□□□□□ -0.74
RDN18-1RDN18-1 GAL80P04387 435 aa10.45□□□□□ -0.74
RDN18-1RDN18-1 SLA2P33338 968 aa10.45□□□□□ -0.74
RDN18-1RDN18-1 SHE3P38272 425 aaKnown RBP10.45□□□□□ -0.74
RDN18-1RDN18-1 CDC1P40986 491 aa10.45□□□□□ -0.74
RDN18-1RDN18-1 ALT2P52892 507 aa10.45□□□□□ -0.74
RDN18-1RDN18-1 VPS9P54787 451 aa10.45□□□□□ -0.74
RDN18-1RDN18-1 ATP25Q03153 612 aa10.45□□□□□ -0.74
RDN18-1RDN18-1 ADY3Q07732 790 aa10.45□□□□□ -0.74
RDN18-1RDN18-1 APC9Q12107 265 aa10.45□□□□□ -0.74
RDN18-1RDN18-1 KCS1Q12494 1050 aa10.45□□□□□ -0.74
RDN18-1RDN18-1 EFG1Q3E705 233 aaKnown RBP10.45□□□□□ -0.74
RDN18-1RDN18-1 SPS22P25380 463 aa10.44□□□□□ -0.74
RDN18-1RDN18-1 YCL068CP25593 260 aa10.44□□□□□ -0.74
RDN18-1RDN18-1 GDA1P32621 518 aa10.44□□□□□ -0.74
RDN18-1RDN18-1 SEC6P32844 805 aa10.44□□□□□ -0.74
RDN18-1RDN18-1 SIP2P34164 415 aaKnown RBP10.44□□□□□ -0.74
RDN18-1RDN18-1 RRP14P36080 434 aaKnown RBP10.44□□□□□ -0.74
RDN18-1RDN18-1 MDJ2P42834 146 aa10.44□□□□□ -0.74
RDN18-1RDN18-1 GPN2Q08726 347 aaPredicted RBP10.44□□□□□ -0.74
RDN18-1RDN18-1 NBP2Q12163 236 aa10.44□□□□□ -0.74
RDN18-1RDN18-1 YMR030W-AQ3E760 96 aa10.44□□□□□ -0.74
RDN18-1RDN18-1 MRM2P53123 320 aa10.44□□□□□ -0.74
RDN18-1RDN18-1 HRD3Q05787 833 aa10.44□□□□□ -0.74
RDN18-1RDN18-1 AAD4Q07747 329 aa10.44□□□□□ -0.74
RDN18-1RDN18-1 TMA46Q12000 345 aaKnown RBP10.44□□□□□ -0.74
RDN18-1RDN18-1 GPM2Q12008 311 aa10.44□□□□□ -0.74
RDN18-1RDN18-1 YOR131CQ12486 218 aa10.44□□□□□ -0.74
RDN18-1RDN18-1 RAD14P28519 371 aa10.43□□□□□ -0.74
RDN18-1RDN18-1 SRP101P32916 621 aa10.43□□□□□ -0.74
RDN18-1RDN18-1 YHL008CP38750 627 aa10.43□□□□□ -0.74
RDN18-1RDN18-1 FSH1P38777 243 aaKnown RBP10.43□□□□□ -0.74
RDN18-1RDN18-1 MGS1P40151 587 aa10.43□□□□□ -0.74
RDN18-1RDN18-1 ALG5P40350 334 aa10.43□□□□□ -0.74
RDN18-1RDN18-1 MNN11P46985 422 aaKnown RBP10.43□□□□□ -0.74
RDN18-1RDN18-1 BUD32P53323 261 aa10.43□□□□□ -0.74
RDN18-1RDN18-1 LCB5Q06147 687 aaKnown RBP10.43□□□□□ -0.74
RDN18-1RDN18-1 DIA2Q08496 732 aaPredicted RBP10.43□□□□□ -0.74
RDN18-1RDN18-1 PUF2Q12221 1075 aaKnown RBP RIP-Chip data10.43□□□□□ -0.74not detected
RDN18-1RDN18-1 RGS2Q99188 309 aa10.43□□□□□ -0.74
RDN18-1RDN18-1 MET16P18408 261 aaPredicted RBP10.42□□□□□ -0.74
RDN18-1RDN18-1 TKL2P33315 681 aa10.42□□□□□ -0.74
RDN18-1RDN18-1 YBR056WP38081 501 aa10.42□□□□□ -0.74
RDN18-1RDN18-1 RDH54P38086 958 aa10.42□□□□□ -0.74
RDN18-1RDN18-1 PRM9P39551 298 aa10.42□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms