RNA–Protein interactions for RNA: ENST00000641471.1

PPT1-215, Transcript of palmitoyl-protein thioesterase 1, human

BASIC

Gene PPT1, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPT1-215	ENST00000641471	IFIT3	O14879	490 aa	Known RBP	18.33	■□□□□ 0.52
PPT1-215	ENST00000641471	PPP6R2	O75170	966 aa		18.33	■□□□□ 0.52
PPT1-215	ENST00000641471	U2AF2	P26368	475 aa	Known RBP eCLIP	18.33	■□□□□ 0.52
PPT1-215	ENST00000641471	AKNAD1	Q5T1N1	836 aa		18.33	■□□□□ 0.52
PPT1-215	ENST00000641471	SHC4	Q6S5L8	630 aa		18.33	■□□□□ 0.52
PPT1-215	ENST00000641471	FILIP1	Q7Z7B0	1213 aa		18.33	■□□□□ 0.52
PPT1-215	ENST00000641471	RTL9	Q8NET4	1388 aa		18.32	■□□□□ 0.52
PPT1-215	ENST00000641471	CTIF	O43310	598 aa	Known RBP	18.32	■□□□□ 0.52
PPT1-215	ENST00000641471	TNNT1	P13805	278 aa		18.32	■□□□□ 0.52
PPT1-215	ENST00000641471	BCAM	P50895	628 aa		18.32	■□□□□ 0.52
PPT1-215	ENST00000641471	CACNA1S	Q13698	1873 aa		18.32	■□□□□ 0.52
PPT1-215	ENST00000641471	SCN7A	Q01118	1682 aa		18.32	■□□□□ 0.52
PPT1-215	ENST00000641471	PNPLA7	Q6ZV29	1317 aa		18.32	■□□□□ 0.52
PPT1-215	ENST00000641471	USP27X	A6NNY8	438 aa		18.32	■□□□□ 0.52
PPT1-215	ENST00000641471	NTSR2	O95665	410 aa		18.32	■□□□□ 0.52
PPT1-215	ENST00000641471	NCAPH	Q15003	741 aa		18.32	■□□□□ 0.52
PPT1-215	ENST00000641471	ZRSR1	Q15695	479 aa	Known RBP	18.32	■□□□□ 0.52
PPT1-215	ENST00000641471	TIGD1	Q96MW7	591 aa		18.32	■□□□□ 0.52
PPT1-215	ENST00000641471	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	18.32	■□□□□ 0.52
PPT1-215	ENST00000641471	SLC26A6	Q9BXS9	759 aa		18.32	■□□□□ 0.52
PPT1-215	ENST00000641471	CNNM2	Q9H8M5	875 aa		18.32	■□□□□ 0.52
PPT1-215	ENST00000641471	SLC12A7	Q9Y666	1083 aa		18.32	■□□□□ 0.52
PPT1-215	ENST00000641471	MYH13	Q9UKX3	1938 aa		18.32	■□□□□ 0.52
PPT1-215	ENST00000641471	KDM4F	A0A1W2PPD8	638 aa		18.31	■□□□□ 0.52
PPT1-215	ENST00000641471	SYK	P43405	635 aa		18.31	■□□□□ 0.52
PPT1-215	ENST00000641471	GNL2	Q13823	731 aa	Known RBP	18.31	■□□□□ 0.52
PPT1-215	ENST00000641471	TPD52L1	Q16890	204 aa	Predicted RBP	18.31	■□□□□ 0.52
PPT1-215	ENST00000641471	STAG1	Q8WVM7	1258 aa		18.31	■□□□□ 0.52
PPT1-215	ENST00000641471	FAM237A	A0A1B0GTK4	181 aa		18.31	■□□□□ 0.52
PPT1-215	ENST00000641471	FMNL1	O95466	1100 aa	Predicted RBP	18.31	■□□□□ 0.52
PPT1-215	ENST00000641471	ATP6V1A	P38606	617 aa		18.31	■□□□□ 0.52
PPT1-215	ENST00000641471	CCDC152	Q4G0S7	254 aa		18.31	■□□□□ 0.52
PPT1-215	ENST00000641471	PARP10	Q53GL7	1025 aa		18.31	■□□□□ 0.52
PPT1-215	ENST00000641471	KRT23	Q9C075	422 aa		18.31	■□□□□ 0.52
PPT1-215	ENST00000641471	DLEC1	Q9Y238	1755 aa		18.31	■□□□□ 0.52
PPT1-215	ENST00000641471	SMTNL1	A8MU46	457 aa		18.3	■□□□□ 0.52
PPT1-215	ENST00000641471	SKIL	P12757	684 aa		18.3	■□□□□ 0.52
PPT1-215	ENST00000641471	SSRP1	Q08945	709 aa	Known RBP	18.3	■□□□□ 0.52
PPT1-215	ENST00000641471	ITPK1	Q13572	414 aa		18.3	■□□□□ 0.52
PPT1-215	ENST00000641471	TRIM29	Q14134	588 aa		18.3	■□□□□ 0.52
PPT1-215	ENST00000641471	RESP18	Q5W5W9	173 aa		18.3	■□□□□ 0.52
PPT1-215	ENST00000641471	MFSD6	Q6ZSS7	791 aa		18.3	■□□□□ 0.52
PPT1-215	ENST00000641471	JMY	Q8N9B5	988 aa		18.3	■□□□□ 0.52
PPT1-215	ENST00000641471	ARID3A	Q99856	593 aa		18.3	■□□□□ 0.52
PPT1-215	ENST00000641471	OSBPL5	Q9H0X9	879 aa	Predicted RBP	18.3	■□□□□ 0.52
PPT1-215	ENST00000641471	TUBE1	Q9UJT0	475 aa		18.3	■□□□□ 0.52
PPT1-215	ENST00000641471	SLC4A4	Q9Y6R1	1079 aa		18.3	■□□□□ 0.52
PPT1-215	ENST00000641471		A0A0G2JS52	829 aa		18.3	■□□□□ 0.52
PPT1-215	ENST00000641471	IFNAR1	P17181	557 aa		18.3	■□□□□ 0.52
PPT1-215	ENST00000641471	GUCY1A2	P33402	732 aa		18.3	■□□□□ 0.52
PPT1-215	ENST00000641471	IGHMBP2	P38935	993 aa	Known RBP	18.3	■□□□□ 0.52
PPT1-215	ENST00000641471	TDO2	P48775	406 aa		18.3	■□□□□ 0.52
PPT1-215	ENST00000641471	ACSBG1	Q96GR2	724 aa		18.3	■□□□□ 0.52
PPT1-215	ENST00000641471	CLIC6	Q96NY7	704 aa		18.3	■□□□□ 0.52
PPT1-215	ENST00000641471	XPO4	Q9C0E2	1151 aa	Known RBP	18.3	■□□□□ 0.52
PPT1-215	ENST00000641471	RRP12	Q5JTH9	1297 aa	Known RBP	18.29	■□□□□ 0.52
PPT1-215	ENST00000641471	ZKSCAN3	Q9BRR0	538 aa		18.29	■□□□□ 0.52
PPT1-215	ENST00000641471	LOC102724428	A0A0B4J2F2	783 aa		18.28	■□□□□ 0.52
PPT1-215	ENST00000641471	GNAT2	P19087	354 aa		18.28	■□□□□ 0.52
PPT1-215	ENST00000641471	SIK1	P57059	783 aa		18.28	■□□□□ 0.52
PPT1-215	ENST00000641471	CHRND	Q07001	517 aa		18.28	■□□□□ 0.52
PPT1-215	ENST00000641471	MIGA1	Q8NAN2	632 aa		18.28	■□□□□ 0.52
PPT1-215	ENST00000641471	IFNK	Q9P0W0	207 aa		18.28	■□□□□ 0.52
PPT1-215	ENST00000641471	NIP7	Q9Y221	180 aa	Known RBP eCLIP	18.28	■□□□□ 0.52
PPT1-215	ENST00000641471	COL1A1	P02452	1464 aa	Predicted RBP	18.28	■□□□□ 0.52
PPT1-215	ENST00000641471	ISM2	Q6H9L7	571 aa		18.28	■□□□□ 0.52
PPT1-215	ENST00000641471	ANKRD7	Q92527	254 aa		18.28	■□□□□ 0.52
PPT1-215	ENST00000641471	NACAP1	Q9BZK3	213 aa		18.28	■□□□□ 0.52
PPT1-215	ENST00000641471	HSD3B7	Q9H2F3	369 aa		18.28	■□□□□ 0.52
PPT1-215	ENST00000641471	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	18.28	■□□□□ 0.52
PPT1-215	ENST00000641471	DUOX1	Q9NRD9	1551 aa		18.27	■□□□□ 0.52
PPT1-215	ENST00000641471	SMC2	O95347	1197 aa		18.27	■□□□□ 0.52
PPT1-215	ENST00000641471	GSDMD	P57764	484 aa		18.27	■□□□□ 0.52
PPT1-215	ENST00000641471	WTAP	Q15007	396 aa		18.27	■□□□□ 0.52
PPT1-215	ENST00000641471	ADGRA1	Q86SQ6	560 aa		18.27	■□□□□ 0.52
PPT1-215	ENST00000641471	IMPACT	Q9P2X3	320 aa		18.27	■□□□□ 0.52
PPT1-215	ENST00000641471	CUTA	O60888	179 aa		18.27	■□□□□ 0.52
PPT1-215	ENST00000641471	MMP1	P03956	469 aa		18.27	■□□□□ 0.52
PPT1-215	ENST00000641471	PNOC	Q13519	176 aa		18.27	■□□□□ 0.52
PPT1-215	ENST00000641471	DDB1	Q16531	1140 aa		18.27	■□□□□ 0.52
PPT1-215	ENST00000641471	RTN1	Q16799	776 aa		18.27	■□□□□ 0.52
PPT1-215	ENST00000641471	NYAP1	Q6ZVC0	841 aa		18.27	■□□□□ 0.52
PPT1-215	ENST00000641471	STK11IP	Q8N1F8	1099 aa		18.27	■□□□□ 0.52
PPT1-215	ENST00000641471	TOMM22	Q9NS69	142 aa		18.27	■□□□□ 0.52
PPT1-215	ENST00000641471	SPATA31A1	Q5TZJ5	1347 aa		18.27	■□□□□ 0.51
PPT1-215	ENST00000641471	IKBKB	O14920	756 aa		18.26	■□□□□ 0.51
PPT1-215	ENST00000641471	METTL16	Q86W50	562 aa	Known RBP	18.26	■□□□□ 0.51
PPT1-215	ENST00000641471	NOSTRIN	Q8IVI9	506 aa		18.26	■□□□□ 0.51
PPT1-215	ENST00000641471	CCDC94	Q9BW85	323 aa	Predicted RBP	18.26	■□□□□ 0.51
PPT1-215	ENST00000641471	BTBD18	B2RXH4	712 aa		18.26	■□□□□ 0.51
PPT1-215	ENST00000641471	CEP135	Q66GS9	1140 aa		18.26	■□□□□ 0.51
PPT1-215	ENST00000641471	TMC6	Q7Z403	805 aa		18.26	■□□□□ 0.51
PPT1-215	ENST00000641471	MARCH10	Q8NA82	808 aa	Predicted RBP	18.26	■□□□□ 0.51
PPT1-215	ENST00000641471	WASF1	Q92558	559 aa		18.26	■□□□□ 0.51
PPT1-215	ENST00000641471	CDCA7	Q9BWT1	371 aa	Predicted RBP	18.26	■□□□□ 0.51
PPT1-215	ENST00000641471	LRP2BP	Q9P2M1	347 aa		18.26	■□□□□ 0.51
PPT1-215	ENST00000641471	KCNJ14	Q9UNX9	436 aa		18.26	■□□□□ 0.51
PPT1-215	ENST00000641471	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	18.26	■□□□□ 0.51
PPT1-215	ENST00000641471	LAMB1	P07942	1786 aa		18.26	■□□□□ 0.51
PPT1-215	ENST00000641471	TOB1	P50616	345 aa	Predicted RBP	18.25	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms