RNA–Protein interactions for RNA: ENST00000639041.1

CCDC7-212, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC7, Length 482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-212ENST00000639041 SCARA3Q6AZY7 606 aa11.17□□□□□ -0.62
CCDC7-212ENST00000639041 DPH6Q7L8W6 267 aa11.17□□□□□ -0.62
CCDC7-212ENST00000639041 C12orf40Q86WS4 652 aa11.17□□□□□ -0.62
CCDC7-212ENST00000639041 ELMO3Q96BJ8 720 aa11.17□□□□□ -0.62
CCDC7-212ENST00000639041 PCDHB14Q9Y5E9 798 aa11.17□□□□□ -0.62
CCDC7-212ENST00000639041 WDR18Q9BV38 432 aa11.16□□□□□ -0.62
CCDC7-212ENST00000639041 LNPKQ9C0E8 428 aa11.16□□□□□ -0.62
CCDC7-212ENST00000639041 CORINQ9Y5Q5 1042 aa11.16□□□□□ -0.62
CCDC7-212ENST00000639041 SHROOM4Q9ULL8 1493 aa11.15□□□□□ -0.62
CCDC7-212ENST00000639041 AOC2O75106 756 aa11.15□□□□□ -0.62
CCDC7-212ENST00000639041 TRIM28Q13263 835 aaKnown RBP11.15□□□□□ -0.62
CCDC7-212ENST00000639041 ARMC5Q96C12 935 aa11.15□□□□□ -0.62
CCDC7-212ENST00000639041 PRAMEF27A3QJZ7 478 aa11.14□□□□□ -0.63
CCDC7-212ENST00000639041 GFRA2O00451 464 aa11.14□□□□□ -0.63
CCDC7-212ENST00000639041 GNB5O14775 395 aa11.14□□□□□ -0.63
CCDC7-212ENST00000639041 RBL2Q08999 1139 aa11.14□□□□□ -0.63
CCDC7-212ENST00000639041 KIF4BQ2VIQ3 1234 aa11.14□□□□□ -0.63
CCDC7-212ENST00000639041 AKAP4Q5JQC9 854 aa11.14□□□□□ -0.63
CCDC7-212ENST00000639041 ACAD11Q709F0 780 aa11.14□□□□□ -0.63
CCDC7-212ENST00000639041 HDXQ7Z353 690 aa11.14□□□□□ -0.63
CCDC7-212ENST00000639041 RUSC1Q9BVN2 902 aa11.14□□□□□ -0.63
CCDC7-212ENST00000639041 HIRIP3Q9BW71 556 aaPredicted RBP11.14□□□□□ -0.63
CCDC7-212ENST00000639041 MKL2Q9ULH7 1088 aa11.14□□□□□ -0.63
CCDC7-212ENST00000639041 STRIP2Q9ULQ0 834 aa11.14□□□□□ -0.63
CCDC7-212ENST00000639041 SLFN14P0C7P3 912 aa11.13□□□□□ -0.63
CCDC7-212ENST00000639041 EIF6P56537 245 aaKnown RBP11.13□□□□□ -0.63
CCDC7-212ENST00000639041 EXOSC6Q5RKV6 272 aaKnown RBP11.13□□□□□ -0.63
CCDC7-212ENST00000639041 SHDQ96IW2 340 aa11.13□□□□□ -0.63
CCDC7-212ENST00000639041 CRBNQ96SW2 442 aa11.13□□□□□ -0.63
CCDC7-212ENST00000639041 HP1BP3Q5SSJ5 553 aaPredicted RBP11.12□□□□□ -0.63
CCDC7-212ENST00000639041 ANKS3Q6ZW76 656 aa11.12□□□□□ -0.63
CCDC7-212ENST00000639041 REXO1Q8N1G1 1221 aaKnown RBP11.12□□□□□ -0.63
CCDC7-212ENST00000639041 PPP1R9AQ9ULJ8 1098 aa11.12□□□□□ -0.63
CCDC7-212ENST00000639041 SNCAIPQ9Y6H5 919 aa11.12□□□□□ -0.63
CCDC7-212ENST00000639041 CNTNAP5Q8WYK1 1306 aa11.11□□□□□ -0.63
CCDC7-212ENST00000639041 HNRNPUQ00839 825 aaKnown RBP eCLIP11.11□□□□□ -0.63
CCDC7-212ENST00000639041 GRIK4Q16099 956 aa11.11□□□□□ -0.63
CCDC7-212ENST00000639041 CCDC144BQ3MJ40 725 aa11.11□□□□□ -0.63
CCDC7-212ENST00000639041 ZC3H12AQ5D1E8 599 aaKnown RBP11.11□□□□□ -0.63
CCDC7-212ENST00000639041 SHISA2Q6UWI4 295 aa11.11□□□□□ -0.63
CCDC7-212ENST00000639041 KIAA1211Q6ZU35 1233 aa11.11□□□□□ -0.63
CCDC7-212ENST00000639041 CKAP2LQ8IYA6 745 aa11.11□□□□□ -0.63
CCDC7-212ENST00000639041 FAM169BQ8N8A8 192 aa11.11□□□□□ -0.63
CCDC7-212ENST00000639041 DCAF11Q8TEB1 546 aa11.11□□□□□ -0.63
CCDC7-212ENST00000639041 ANTXR1Q9H6X2 564 aa11.11□□□□□ -0.63
CCDC7-212ENST00000639041 PICK1Q9NRD5 415 aa11.11□□□□□ -0.63
CCDC7-212ENST00000639041 SPDYE3A6NKU9 549 aa11.1□□□□□ -0.63
CCDC7-212ENST00000639041 SMAD7O15105 426 aaKnown RBP11.1□□□□□ -0.63
CCDC7-212ENST00000639041 PPM1JQ5JR12 505 aa11.1□□□□□ -0.63
CCDC7-212ENST00000639041 NUTM2GQ5VZR2 741 aa11.1□□□□□ -0.63
CCDC7-212ENST00000639041 AGGF1Q8N302 714 aaeCLIP11.1□□□□□ -0.63
CCDC7-212ENST00000639041 HNRNPLLQ8WVV9 542 aaKnown RBP11.1□□□□□ -0.63
CCDC7-212ENST00000639041 EHMT1Q9H9B1 1298 aa11.1□□□□□ -0.63
CCDC7-212ENST00000639041 ZNRF3Q9ULT6 936 aa11.1□□□□□ -0.63
CCDC7-212ENST00000639041 HIF3AQ9Y2N7 669 aa11.1□□□□□ -0.63
CCDC7-212ENST00000639041 PCDHGC5Q9Y5F6 944 aa11.1□□□□□ -0.63
CCDC7-212ENST00000639041 HTR3BO95264 441 aa11.09□□□□□ -0.63
CCDC7-212ENST00000639041 CYFIP1Q7L576 1253 aa11.09□□□□□ -0.63
CCDC7-212ENST00000639041 TMPRSS13Q9BYE2 586 aa11.09□□□□□ -0.63
CCDC7-212ENST00000639041 AP4E1Q9UPM8 1137 aa11.09□□□□□ -0.63
CCDC7-212ENST00000639041 DRD2P14416 443 aa11.08□□□□□ -0.64
CCDC7-212ENST00000639041 ELNP15502 786 aa11.08□□□□□ -0.64
CCDC7-212ENST00000639041 PLCG1P19174 1290 aa11.08□□□□□ -0.64
CCDC7-212ENST00000639041 LORP23490 312 aaPredicted RBP11.08□□□□□ -0.64
CCDC7-212ENST00000639041 GRK4P32298 578 aa11.08□□□□□ -0.64
CCDC7-212ENST00000639041 GIPRP48546 466 aa11.08□□□□□ -0.64
CCDC7-212ENST00000639041 ID3Q02535 119 aa11.08□□□□□ -0.64
CCDC7-212ENST00000639041 PRRT3Q5FWE3 981 aa11.08□□□□□ -0.64
CCDC7-212ENST00000639041 IGF2-ASQ6U949 168 aa11.08□□□□□ -0.64
CCDC7-212ENST00000639041 RUFY4Q6ZNE9 571 aa11.08□□□□□ -0.64
CCDC7-212ENST00000639041 TMPRSS2O15393 492 aa11.07□□□□□ -0.64
CCDC7-212ENST00000639041 ALX3O95076 343 aa11.07□□□□□ -0.64
CCDC7-212ENST00000639041 ATE1O95260 518 aa11.07□□□□□ -0.64
CCDC7-212ENST00000639041 ETF1P62495 437 aaKnown RBP11.07□□□□□ -0.64
CCDC7-212ENST00000639041 PODNQ7Z5L7 613 aa11.07□□□□□ -0.64
CCDC7-212ENST00000639041 C12orf50Q8NA57 414 aaPredicted RBP11.07□□□□□ -0.64
CCDC7-212ENST00000639041 ZSCAN1Q8NBB4 408 aa11.07□□□□□ -0.64
CCDC7-212ENST00000639041 MRPL18Q9H0U6 180 aaKnown RBP11.07□□□□□ -0.64
CCDC7-212ENST00000639041 RNF208Q9H0X6 261 aa11.07□□□□□ -0.64
CCDC7-212ENST00000639041 ZSWIM4Q9H7M6 989 aa11.07□□□□□ -0.64
CCDC7-212ENST00000639041 REV1Q9UBZ9 1251 aa11.07□□□□□ -0.64
CCDC7-212ENST00000639041 PRKAG3Q9UGI9 489 aa11.07□□□□□ -0.64
CCDC7-212ENST00000639041 R3HCC1Q9Y3T6 440 aaKnown RBP11.07□□□□□ -0.64
CCDC7-212ENST00000639041 PIK3R2O00459 728 aa11.06□□□□□ -0.64
CCDC7-212ENST00000639041 WIPF1O43516 503 aa11.06□□□□□ -0.64
CCDC7-212ENST00000639041 PGRP06401 933 aa11.06□□□□□ -0.64
CCDC7-212ENST00000639041 SOGA3Q5TF21 947 aa11.06□□□□□ -0.64
CCDC7-212ENST00000639041 LSRQ86X29 649 aaPredicted RBP11.06□□□□□ -0.64
CCDC7-212ENST00000639041 IMPDH2P12268 514 aa11.05□□□□□ -0.64
CCDC7-212ENST00000639041 PPP2R5EQ16537 467 aa11.05□□□□□ -0.64
CCDC7-212ENST00000639041 DYMQ7RTS9 669 aa11.05□□□□□ -0.64
CCDC7-212ENST00000639041 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.05□□□□□ -0.64
CCDC7-212ENST00000639041 BEND7Q8N7W2 519 aaPredicted RBP11.05□□□□□ -0.64
CCDC7-212ENST00000639041 TRIM55Q9BYV6 548 aa11.05□□□□□ -0.64
CCDC7-212ENST00000639041 CYP4F12Q9HCS2 524 aa11.05□□□□□ -0.64
CCDC7-212ENST00000639041 DISC1Q9NRI5 854 aa11.05□□□□□ -0.64
CCDC7-212ENST00000639041 CRIM1Q9NZV1 1036 aa11.05□□□□□ -0.64
CCDC7-212ENST00000639041 KLHL3Q9UH77 587 aa11.05□□□□□ -0.64
CCDC7-212ENST00000639041 ADAMTS8Q9UP79 889 aa11.05□□□□□ -0.64
CCDC7-212ENST00000639041 MEGF11A6BM72 1044 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms