RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 DMRTA1Q5VZB9 504 aa6.1□□□□□ -1.43
LINC00550-201ENST00000629293 ANKRD18AQ8IVF6 992 aa6.1□□□□□ -1.43
LINC00550-201ENST00000629293 OGFOD1Q8N543 542 aa6.1□□□□□ -1.43
LINC00550-201ENST00000629293 RUNDC1Q96C34 613 aa6.1□□□□□ -1.43
LINC00550-201ENST00000629293 MBIPQ9NS73 344 aa6.1□□□□□ -1.43
LINC00550-201ENST00000629293 PGAP2Q9UHJ9 254 aa6.1□□□□□ -1.43
LINC00550-201ENST00000629293 FKBPLQ9UIM3 349 aa6.1□□□□□ -1.43
LINC00550-201ENST00000629293 FZD1Q9UP38 647 aa6.1□□□□□ -1.43
LINC00550-201ENST00000629293 DLG5Q8TDM6 1919 aa6.1□□□□□ -1.43
LINC00550-201ENST00000629293 ADAMTSL1Q8N6G6 1762 aa6.1□□□□□ -1.43
LINC00550-201ENST00000629293 SASH1O94885 1247 aa6.09□□□□□ -1.43
LINC00550-201ENST00000629293 RPS12P25398 132 aaKnown RBP6.09□□□□□ -1.43
LINC00550-201ENST00000629293 SERPINB4P48594 390 aa6.09□□□□□ -1.43
LINC00550-201ENST00000629293 SF3B3Q15393 1217 aaKnown RBP6.09□□□□□ -1.43
LINC00550-201ENST00000629293 NBPF9Q3BBW0 867 aa6.09□□□□□ -1.43
LINC00550-201ENST00000629293 RNF19BQ6ZMZ0 732 aa6.09□□□□□ -1.43
LINC00550-201ENST00000629293 DEPDC4Q8N2C3 294 aa6.09□□□□□ -1.43
LINC00550-201ENST00000629293 MRRFQ96E11 262 aaKnown RBP6.09□□□□□ -1.43
LINC00550-201ENST00000629293 HHIPL1Q96JK4 782 aa6.09□□□□□ -1.43
LINC00550-201ENST00000629293 ISCA1Q9BUE6 129 aa6.09□□□□□ -1.43
LINC00550-201ENST00000629293 RCAN3Q9UKA8 241 aa6.09□□□□□ -1.43
LINC00550-201ENST00000629293 BRCA2P51587 3418 aa6.09□□□□□ -1.43
LINC00550-201ENST00000629293 BLOC1S3Q6QNY0 202 aa6.09□□□□□ -1.43
LINC00550-201ENST00000629293 KIAA0825Q8IV33 1275 aa6.09□□□□□ -1.43
LINC00550-201ENST00000629293 MYOZ2Q9NPC6 264 aa6.09□□□□□ -1.43
LINC00550-201ENST00000629293 CWC25Q9NXE8 425 aaPredicted RBP6.09□□□□□ -1.43
LINC00550-201ENST00000629293 JAG2Q9Y219 1238 aa6.09□□□□□ -1.43
LINC00550-201ENST00000629293 ZNF521Q96K83 1311 aa6.09□□□□□ -1.43
LINC00550-201ENST00000629293 TNRC18O15417 2968 aaPredicted RBP6.09□□□□□ -1.43
LINC00550-201ENST00000629293 FAM155AB1AL88 458 aaPredicted RBP6.09□□□□□ -1.44
LINC00550-201ENST00000629293 F8W031 263 aaPredicted RBP6.09□□□□□ -1.44
LINC00550-201ENST00000629293 OCLNQ16625 522 aa6.09□□□□□ -1.44
LINC00550-201ENST00000629293 TSGA10IPQ3SY00 556 aa6.09□□□□□ -1.44
LINC00550-201ENST00000629293 ZBTB38Q8NAP3 1195 aaPredicted RBP6.09□□□□□ -1.44
LINC00550-201ENST00000629293 CHMP3Q9Y3E7 222 aa6.09□□□□□ -1.44
LINC00550-201ENST00000629293 TRPM7Q96QT4 1865 aa6.09□□□□□ -1.44
LINC00550-201ENST00000629293 VIL1P09327 827 aaKnown RBP6.08□□□□□ -1.44
LINC00550-201ENST00000629293 KCNJ4P48050 445 aa6.08□□□□□ -1.44
LINC00550-201ENST00000629293 PDE8AO60658 829 aa6.08□□□□□ -1.44
LINC00550-201ENST00000629293 MYCP01106 439 aaPredicted RBP6.08□□□□□ -1.44
LINC00550-201ENST00000629293 NF2P35240 595 aa6.08□□□□□ -1.44
LINC00550-201ENST00000629293 CWF19L2Q2TBE0 894 aaKnown RBP6.08□□□□□ -1.44
LINC00550-201ENST00000629293 CTU1Q7Z7A3 348 aaKnown RBP6.08□□□□□ -1.44
LINC00550-201ENST00000629293 C1orf216Q8TAB5 229 aa6.08□□□□□ -1.44
LINC00550-201ENST00000629293 CCDC136Q96JN2 1154 aa6.08□□□□□ -1.44
LINC00550-201ENST00000629293 MAP10Q9P2G4 905 aa6.08□□□□□ -1.44
LINC00550-201ENST00000629293 MAP3K2Q9Y2U5 619 aa6.08□□□□□ -1.44
LINC00550-201ENST00000629293 XDHP47989 1333 aa6.08□□□□□ -1.44
LINC00550-201ENST00000629293 LAMB4A4D0S4 1761 aa6.08□□□□□ -1.44
LINC00550-201ENST00000629293 PI4KAP2A4QPH2 592 aa6.08□□□□□ -1.44
LINC00550-201ENST00000629293 SNAP23O00161 211 aa6.08□□□□□ -1.44
LINC00550-201ENST00000629293 DDX58O95786 925 aaKnown RBP6.08□□□□□ -1.44
LINC00550-201ENST00000629293 HSP90B1P14625 803 aaKnown RBP6.08□□□□□ -1.44
LINC00550-201ENST00000629293 UBE3BQ7Z3V4 1068 aa6.08□□□□□ -1.44
LINC00550-201ENST00000629293 RASAL3Q86YV0 1011 aa6.08□□□□□ -1.44
LINC00550-201ENST00000629293 PI4KAP1Q8N8J0 262 aa6.08□□□□□ -1.44
LINC00550-201ENST00000629293 C8orf58Q8NAV2 365 aa6.08□□□□□ -1.44
LINC00550-201ENST00000629293 ZNF296Q8WUU4 475 aaPredicted RBP6.08□□□□□ -1.44
LINC00550-201ENST00000629293 TSR2Q969E8 191 aaKnown RBP6.08□□□□□ -1.44
LINC00550-201ENST00000629293 CDC5LQ99459 802 aaKnown RBP6.08□□□□□ -1.44
LINC00550-201ENST00000629293 BABAM1Q9NWV8 329 aa6.08□□□□□ -1.44
LINC00550-201ENST00000629293 CEP126Q9P2H0 1117 aa6.08□□□□□ -1.44
LINC00550-201ENST00000629293 RANBP2P49792 3224 aaKnown RBP6.08□□□□□ -1.44
LINC00550-201ENST00000629293 KDM3BQ7LBC6 1761 aa6.07□□□□□ -1.44
LINC00550-201ENST00000629293 PLIN1O60240 522 aa6.07□□□□□ -1.44
LINC00550-201ENST00000629293 NEXNQ0ZGT2 675 aa6.07□□□□□ -1.44
LINC00550-201ENST00000629293 NCOA4Q13772 614 aa6.07□□□□□ -1.44
LINC00550-201ENST00000629293 FBXO33Q7Z6M2 555 aa6.07□□□□□ -1.44
LINC00550-201ENST00000629293 GREM2Q9H772 168 aa6.07□□□□□ -1.44
LINC00550-201ENST00000629293 RGS19P49795 217 aa6.07□□□□□ -1.44
LINC00550-201ENST00000629293 RBM5P52756 815 aaKnown RBP eCLIP6.07□□□□□ -1.44
LINC00550-201ENST00000629293 GTF2IP78347 998 aa6.07□□□□□ -1.44
LINC00550-201ENST00000629293 KCNH2Q12809 1159 aa6.07□□□□□ -1.44
LINC00550-201ENST00000629293 CCDC191Q8NCU4 936 aa6.07□□□□□ -1.44
LINC00550-201ENST00000629293 MPHOSPH8Q99549 860 aa6.07□□□□□ -1.44
LINC00550-201ENST00000629293 STK31Q9BXU1 1019 aa6.07□□□□□ -1.44
LINC00550-201ENST00000629293 ANGEL1Q9UNK9 670 aaKnown RBP6.07□□□□□ -1.44
LINC00550-201ENST00000629293 HPS5Q9UPZ3 1129 aa6.07□□□□□ -1.44
LINC00550-201ENST00000629293 PCCAP05165 728 aaPredicted RBP6.06□□□□□ -1.44
LINC00550-201ENST00000629293 IGHMBP2P38935 993 aaKnown RBP6.06□□□□□ -1.44
LINC00550-201ENST00000629293 PUS10Q3MIT2 529 aaKnown RBP6.06□□□□□ -1.44
LINC00550-201ENST00000629293 TTLL5Q6EMB2 1281 aa6.06□□□□□ -1.44
LINC00550-201ENST00000629293 TXNRD3Q86VQ6 643 aa6.06□□□□□ -1.44
LINC00550-201ENST00000629293 TSPYL6Q8N831 410 aa6.06□□□□□ -1.44
LINC00550-201ENST00000629293 AGBL3Q8NEM8 1001 aa6.06□□□□□ -1.44
LINC00550-201ENST00000629293 VEZTQ9HBM0 779 aa6.06□□□□□ -1.44
LINC00550-201ENST00000629293 KIAA1024Q9UPX6 916 aa6.06□□□□□ -1.44
LINC00550-201ENST00000629293 HTTP42858 3142 aa6.06□□□□□ -1.44
LINC00550-201ENST00000629293 CLRN2A0PK11 232 aa6.06□□□□□ -1.44
LINC00550-201ENST00000629293 WNT10BO00744 389 aa6.06□□□□□ -1.44
LINC00550-201ENST00000629293 ATP2B4P23634 1241 aa6.06□□□□□ -1.44
LINC00550-201ENST00000629293 KLRK1P26718 216 aa6.06□□□□□ -1.44
LINC00550-201ENST00000629293 ARID4AP29374 1257 aaPredicted RBP6.06□□□□□ -1.44
LINC00550-201ENST00000629293 CTSWP56202 376 aa6.06□□□□□ -1.44
LINC00550-201ENST00000629293 GNAI1P63096 354 aa6.06□□□□□ -1.44
LINC00550-201ENST00000629293 CCDC30Q5VVM6 783 aa6.06□□□□□ -1.44
LINC00550-201ENST00000629293 PODNQ7Z5L7 613 aa6.06□□□□□ -1.44
LINC00550-201ENST00000629293 EXOC6Q8TAG9 804 aa6.06□□□□□ -1.44
LINC00550-201ENST00000629293 DUOX1Q9NRD9 1551 aa6.06□□□□□ -1.44
LINC00550-201ENST00000629293 ZBTB7BO15156 539 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms