RNA–Protein interactions for RNA: ENST00000578307.1

BPTF-211, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 2,121 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-211ENST00000578307 CCDC73Q6ZRK6 1079 aa11.2□□□□□ -0.62
BPTF-211ENST00000578307 C3orf67Q6ZVT6 689 aa11.2□□□□□ -0.62
BPTF-211ENST00000578307 ILDR1Q86SU0 546 aaPredicted RBP11.2□□□□□ -0.62
BPTF-211ENST00000578307 VPS37DQ86XT2 251 aa11.2□□□□□ -0.62
BPTF-211ENST00000578307 CCAR1Q8IX12 1150 aaKnown RBP11.2□□□□□ -0.62
BPTF-211ENST00000578307 IGDCC4Q8TDY8 1250 aa11.2□□□□□ -0.62
BPTF-211ENST00000578307 FTOQ9C0B1 505 aaKnown RBP eCLIP11.2□□□□□ -0.62
BPTF-211ENST00000578307 RAI14Q9P0K7 980 aa11.2□□□□□ -0.62
BPTF-211ENST00000578307 ABCF2Q9UG63 623 aa11.2□□□□□ -0.62
BPTF-211ENST00000578307 USP21Q9UK80 565 aa11.2□□□□□ -0.62
BPTF-211ENST00000578307 IQSEC3Q9UPP2 1182 aaPredicted RBP11.2□□□□□ -0.62
BPTF-211ENST00000578307 MRVI1Q9Y6F6 885 aa11.2□□□□□ -0.62
BPTF-211ENST00000578307 ECM29Q5VYK3 1845 aa11.19□□□□□ -0.62
BPTF-211ENST00000578307 CCDC69A6NI79 296 aa11.19□□□□□ -0.62
BPTF-211ENST00000578307 IFIT3O14879 490 aaKnown RBP11.19□□□□□ -0.62
BPTF-211ENST00000578307 CTAGE5O15320 804 aa11.19□□□□□ -0.62
BPTF-211ENST00000578307 PRKAB2O43741 272 aa11.19□□□□□ -0.62
BPTF-211ENST00000578307 CYP7A1P22680 504 aa11.19□□□□□ -0.62
BPTF-211ENST00000578307 LIFRP42702 1097 aa11.19□□□□□ -0.62
BPTF-211ENST00000578307 GYG1P46976 350 aa11.19□□□□□ -0.62
BPTF-211ENST00000578307 ME1P48163 572 aa11.19□□□□□ -0.62
BPTF-211ENST00000578307 OTUD7BQ6GQQ9 843 aa11.19□□□□□ -0.62
BPTF-211ENST00000578307 SGMS1Q86VZ5 419 aa11.19□□□□□ -0.62
BPTF-211ENST00000578307 MICU3Q86XE3 530 aa11.19□□□□□ -0.62
BPTF-211ENST00000578307 MIGA1Q8NAN2 632 aa11.19□□□□□ -0.62
BPTF-211ENST00000578307 NLRP3Q96P20 1036 aa11.19□□□□□ -0.62
BPTF-211ENST00000578307 BCL2L12Q9HB09 334 aa11.19□□□□□ -0.62
BPTF-211ENST00000578307 LY9Q9HBG7 655 aa11.19□□□□□ -0.62
BPTF-211ENST00000578307 RTEL1Q9NZ71 1219 aa11.19□□□□□ -0.62
BPTF-211ENST00000578307 MINPP1Q9UNW1 487 aa11.19□□□□□ -0.62
BPTF-211ENST00000578307 THSD7AQ9UPZ6 1657 aa11.19□□□□□ -0.62
BPTF-211ENST00000578307 GOLGA8AA7E2F4 631 aa11.18□□□□□ -0.62
BPTF-211ENST00000578307 GNPATO15228 680 aa11.18□□□□□ -0.62
BPTF-211ENST00000578307 SART3Q15020 963 aaKnown RBP11.18□□□□□ -0.62
BPTF-211ENST00000578307 GRIPAP1Q4V328 841 aa11.18□□□□□ -0.62
BPTF-211ENST00000578307 SYNE3Q6ZMZ3 975 aa11.18□□□□□ -0.62
BPTF-211ENST00000578307 ZNF771Q7L3S4 317 aaPredicted RBP11.18□□□□□ -0.62
BPTF-211ENST00000578307 NBPF5PQ86XG9 351 aaPredicted RBP11.18□□□□□ -0.62
BPTF-211ENST00000578307 NKX2-3Q8TAU0 364 aa11.18□□□□□ -0.62
BPTF-211ENST00000578307 STAG1Q8WVM7 1258 aa11.18□□□□□ -0.62
BPTF-211ENST00000578307 RNF41Q9H4P4 317 aaPredicted RBP11.18□□□□□ -0.62
BPTF-211ENST00000578307 TOMM22Q9NS69 142 aa11.18□□□□□ -0.62
BPTF-211ENST00000578307 ZSWIM5Q9P217 1185 aa11.18□□□□□ -0.62
BPTF-211ENST00000578307 CCNL1Q9UK58 526 aaPredicted RBP11.18□□□□□ -0.62
BPTF-211ENST00000578307 SLC12A7Q9Y666 1083 aa11.18□□□□□ -0.62
BPTF-211ENST00000578307 TAF1LQ8IZX4 1826 aa11.18□□□□□ -0.62
BPTF-211ENST00000578307 MAGEB6P1A0A0J9YX57 407 aa11.18□□□□□ -0.62
BPTF-211ENST00000578307 STK38Q15208 465 aa11.18□□□□□ -0.62
BPTF-211ENST00000578307 SF3A1Q15459 793 aaKnown RBP11.18□□□□□ -0.62
BPTF-211ENST00000578307 ANO6Q4KMQ2 910 aa11.18□□□□□ -0.62
BPTF-211ENST00000578307 PTF1AQ7RTS3 328 aa11.18□□□□□ -0.62
BPTF-211ENST00000578307 CNPY4Q8N129 248 aa11.18□□□□□ -0.62
BPTF-211ENST00000578307 CELF1Q92879 486 aaKnown RBP11.18□□□□□ -0.62
BPTF-211ENST00000578307 ALG1Q9BT22 464 aa11.18□□□□□ -0.62
BPTF-211ENST00000578307 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.18□□□□□ -0.62
BPTF-211ENST00000578307 RTCBQ9Y3I0 505 aaKnown RBP11.18□□□□□ -0.62
BPTF-211ENST00000578307 ERICH2A1L162 156 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 KINO60870 393 aaKnown RBP11.17□□□□□ -0.62
BPTF-211ENST00000578307 YEATS4O95619 227 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 CAVIN2O95810 425 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 POLR3DP05423 398 aaPredicted RBP11.17□□□□□ -0.62
BPTF-211ENST00000578307 RXRAP19793 462 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 IARSP41252 1262 aaKnown RBP11.17□□□□□ -0.62
BPTF-211ENST00000578307 RPS8P62241 208 aaKnown RBP11.17□□□□□ -0.62
BPTF-211ENST00000578307 KIF23Q02241 960 aaPredicted RBP11.17□□□□□ -0.62
BPTF-211ENST00000578307 FAM160A1Q05DH4 1040 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 RRP12Q5JTH9 1297 aaKnown RBP11.17□□□□□ -0.62
BPTF-211ENST00000578307 MYSM1Q5VVJ2 828 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 TPTE2Q6XPS3 522 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 ZNF710Q8N1W2 664 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 KCNG4Q8TDN1 519 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 MTA3Q9BTC8 594 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 INCENPQ9NQS7 918 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 POLR3EQ9NVU0 708 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 OGFRQ9NZT2 677 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 SRP68Q9UHB9 627 aaKnown RBP11.17□□□□□ -0.62
BPTF-211ENST00000578307 SPATA31A6Q5VVP1 1343 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 LY75O60449 1722 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 CACNA1SQ13698 1873 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 SPDYE4A6NLX3 237 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 SEMA3EO15041 775 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 CDC27P30260 824 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 TRIM29Q14134 588 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 ADALQ6DHV7 355 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 CTR9Q6PD62 1173 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 SMIM5Q71RC9 77 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 CCDC144CPQ8IYA2 1237 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 PDCL2Q8N4E4 241 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 FSIP1Q8NA03 581 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 LINC00301Q8NCQ3 95 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 MRPS27Q92552 414 aaKnown RBP11.17□□□□□ -0.62
BPTF-211ENST00000578307 FAM84BQ96KN1 310 aaPredicted RBP11.17□□□□□ -0.62
BPTF-211ENST00000578307 ANKRD2Q9GZV1 360 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 SENP2Q9HC62 589 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 PCDHA7Q9UN72 937 aa11.17□□□□□ -0.62
BPTF-211ENST00000578307 COL1A1P02452 1464 aaPredicted RBP11.16□□□□□ -0.62
BPTF-211ENST00000578307 STK36Q9NRP7 1315 aa11.16□□□□□ -0.62
BPTF-211ENST00000578307 A0A1W2PQ27 194 aa11.16□□□□□ -0.62
BPTF-211ENST00000578307 A0A1W2PQ64 194 aa11.16□□□□□ -0.62
BPTF-211ENST00000578307 A0A1W2PQD8 194 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms