RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 JAG2Q9Y219 1238 aa11.75□□□□□ -0.53
NPLOC4-219ENST00000576713 ARAP2Q8WZ64 1704 aa11.74□□□□□ -0.53
NPLOC4-219ENST00000576713 IL15P40933 162 aaPredicted RBP11.74□□□□□ -0.53
NPLOC4-219ENST00000576713 COPS2P61201 443 aa11.74□□□□□ -0.53
NPLOC4-219ENST00000576713 TMEM259Q4ZIN3 620 aa11.74□□□□□ -0.53
NPLOC4-219ENST00000576713 DACT2Q5SW24 774 aa11.74□□□□□ -0.53
NPLOC4-219ENST00000576713 BRICD5Q6PL45 260 aa11.74□□□□□ -0.53
NPLOC4-219ENST00000576713 RNF19BQ6ZMZ0 732 aa11.74□□□□□ -0.53
NPLOC4-219ENST00000576713 CERS5Q8N5B7 392 aa11.74□□□□□ -0.53
NPLOC4-219ENST00000576713 THAP11Q96EK4 314 aa11.74□□□□□ -0.53
NPLOC4-219ENST00000576713 GMLQ99445 158 aa11.74□□□□□ -0.53
NPLOC4-219ENST00000576713 COA1Q9GZY4 146 aa11.74□□□□□ -0.53
NPLOC4-219ENST00000576713 IQSEC3Q9UPP2 1182 aaPredicted RBP11.74□□□□□ -0.53
NPLOC4-219ENST00000576713 HDAC5Q9UQL6 1122 aa11.74□□□□□ -0.53
NPLOC4-219ENST00000576713 ZNF609O15014 1411 aa11.73□□□□□ -0.53
NPLOC4-219ENST00000576713 VIL1P09327 827 aaKnown RBP11.73□□□□□ -0.53
NPLOC4-219ENST00000576713 IL1R1P14778 569 aa11.73□□□□□ -0.53
NPLOC4-219ENST00000576713 VEGFAP15692 232 aaPredicted RBP11.73□□□□□ -0.53
NPLOC4-219ENST00000576713 TIMM10P62072 90 aa11.73□□□□□ -0.53
NPLOC4-219ENST00000576713 IRX6P78412 446 aaPredicted RBP11.73□□□□□ -0.53
NPLOC4-219ENST00000576713 PUM3Q15397 648 aaKnown RBP11.73□□□□□ -0.53
NPLOC4-219ENST00000576713 GRIK5Q16478 980 aa11.73□□□□□ -0.53
NPLOC4-219ENST00000576713 PODNQ7Z5L7 613 aa11.73□□□□□ -0.53
NPLOC4-219ENST00000576713 FBXO33Q7Z6M2 555 aa11.73□□□□□ -0.53
NPLOC4-219ENST00000576713 TAF1DQ9H5J8 278 aaPredicted RBP11.73□□□□□ -0.53
NPLOC4-219ENST00000576713 GPRC5DQ9NZD1 345 aa11.73□□□□□ -0.53
NPLOC4-219ENST00000576713 HCSTQ9UBK5 93 aa11.73□□□□□ -0.53
NPLOC4-219ENST00000576713 EXOC6BQ9Y2D4 811 aa11.73□□□□□ -0.53
NPLOC4-219ENST00000576713 NOP58Q9Y2X3 529 aaKnown RBP11.73□□□□□ -0.53
NPLOC4-219ENST00000576713 PCNTO95613 3336 aa11.72□□□□□ -0.53
NPLOC4-219ENST00000576713 USP17L3A6NCW0 530 aa11.72□□□□□ -0.53
NPLOC4-219ENST00000576713 USP17L4A6NCW7 530 aa11.72□□□□□ -0.53
NPLOC4-219ENST00000576713 SURF6O75683 361 aaKnown RBP11.72□□□□□ -0.53
NPLOC4-219ENST00000576713 HIRAP54198 1017 aaPredicted RBP11.72□□□□□ -0.53
NPLOC4-219ENST00000576713 GTF2IP78347 998 aa11.72□□□□□ -0.53
NPLOC4-219ENST00000576713 ATP2B3Q16720 1220 aa11.72□□□□□ -0.53
NPLOC4-219ENST00000576713 USP17L1Q7RTZ2 530 aa11.72□□□□□ -0.53
NPLOC4-219ENST00000576713 RETREG3Q86VR2 466 aa11.72□□□□□ -0.53
NPLOC4-219ENST00000576713 TDRD7Q8NHU6 1098 aaKnown RBP11.72□□□□□ -0.53
NPLOC4-219ENST00000576713 EXOC6Q8TAG9 804 aa11.72□□□□□ -0.53
NPLOC4-219ENST00000576713 TRPM4Q8TD43 1214 aa11.72□□□□□ -0.53
NPLOC4-219ENST00000576713 MTRQ99707 1265 aa11.72□□□□□ -0.53
NPLOC4-219ENST00000576713 TLR7Q9NYK1 1049 aaKnown RBP11.72□□□□□ -0.53
NPLOC4-219ENST00000576713 CEP126Q9P2H0 1117 aa11.72□□□□□ -0.53
NPLOC4-219ENST00000576713 SCN4AP35499 1836 aa11.72□□□□□ -0.53
NPLOC4-219ENST00000576713 A0A1B0GUL7 405 aa11.71□□□□□ -0.53
NPLOC4-219ENST00000576713 FMNL1O95466 1100 aaPredicted RBP11.71□□□□□ -0.53
NPLOC4-219ENST00000576713 HIBADHP31937 336 aaKnown RBP11.71□□□□□ -0.53
NPLOC4-219ENST00000576713 EPHX2P34913 555 aa11.71□□□□□ -0.53
NPLOC4-219ENST00000576713 PHKA1P46020 1223 aa11.71□□□□□ -0.53
NPLOC4-219ENST00000576713 FSTL1Q12841 308 aa11.71□□□□□ -0.53
NPLOC4-219ENST00000576713 TNIP1Q15025 636 aa11.71□□□□□ -0.53
NPLOC4-219ENST00000576713 TJAP1Q5JTD0 557 aa11.71□□□□□ -0.53
NPLOC4-219ENST00000576713 RPAP2Q8IXW5 612 aaPredicted RBP11.71□□□□□ -0.53
NPLOC4-219ENST00000576713 C16orf71Q8IYS4 520 aaPredicted RBP11.71□□□□□ -0.53
NPLOC4-219ENST00000576713 BANK1Q8NDB2 785 aa11.71□□□□□ -0.53
NPLOC4-219ENST00000576713 LPIN2Q92539 896 aa11.71□□□□□ -0.53
NPLOC4-219ENST00000576713 HACL1Q9UJ83 578 aa11.71□□□□□ -0.53
NPLOC4-219ENST00000576713 PCDHAC2Q9Y5I4 1007 aa11.71□□□□□ -0.53
NPLOC4-219ENST00000576713 ASTN2O75129 1339 aaPredicted RBP11.7□□□□□ -0.54
NPLOC4-219ENST00000576713 AOX1Q06278 1338 aa11.7□□□□□ -0.54
NPLOC4-219ENST00000576713 CFAP99D6REC4 459 aa11.7□□□□□ -0.54
NPLOC4-219ENST00000576713 STRIP1Q5VSL9 837 aa11.7□□□□□ -0.54
NPLOC4-219ENST00000576713 ZNF804AQ7Z570 1209 aa11.7□□□□□ -0.54
NPLOC4-219ENST00000576713 CNOT7Q9UIV1 285 aaKnown RBP11.7□□□□□ -0.54
NPLOC4-219ENST00000576713 SLC5A1P13866 664 aa11.69□□□□□ -0.54
NPLOC4-219ENST00000576713 MMRN1Q13201 1228 aa11.69□□□□□ -0.54
NPLOC4-219ENST00000576713 G3BP1Q13283 466 aaKnown RBP eCLIP11.69□□□□□ -0.54
NPLOC4-219ENST00000576713 SCARF1Q14162 830 aa11.69□□□□□ -0.54
NPLOC4-219ENST00000576713 TBC1D10BQ4KMP7 808 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-219ENST00000576713 TNNI3KQ59H18 835 aa11.69□□□□□ -0.54
NPLOC4-219ENST00000576713 TTLL5Q6EMB2 1281 aa11.69□□□□□ -0.54
NPLOC4-219ENST00000576713 DLK2Q6UY11 383 aa11.69□□□□□ -0.54
NPLOC4-219ENST00000576713 SMC1BQ8NDV3 1235 aa11.69□□□□□ -0.54
NPLOC4-219ENST00000576713 PRR7Q8TB68 274 aa11.69□□□□□ -0.54
NPLOC4-219ENST00000576713 DPF2Q92785 391 aa11.69□□□□□ -0.54
NPLOC4-219ENST00000576713 EAF2Q96CJ1 260 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-219ENST00000576713 XAGE2Q96GT9 111 aa11.69□□□□□ -0.54
NPLOC4-219ENST00000576713 USB1Q9BQ65 265 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-219ENST00000576713 FPGT-TNNI3KV9GXZ4 949 aa11.69□□□□□ -0.54
NPLOC4-219ENST00000576713 FAM205AQ6ZU69 1335 aa11.68□□□□□ -0.54
NPLOC4-219ENST00000576713 APBB1O00213 710 aa11.68□□□□□ -0.54
NPLOC4-219ENST00000576713 AP1G2O75843 785 aa11.68□□□□□ -0.54
NPLOC4-219ENST00000576713 IFIT1P09914 478 aaKnown RBP11.68□□□□□ -0.54
NPLOC4-219ENST00000576713 ZNF280AP59817 542 aaPredicted RBP11.68□□□□□ -0.54
NPLOC4-219ENST00000576713 FMR1Q06787 632 aaKnown RBP eCLIP11.68□□□□□ -0.54
NPLOC4-219ENST00000576713 EAPPQ56P03 285 aaPredicted RBP11.68□□□□□ -0.54
NPLOC4-219ENST00000576713 CCDC102BQ68D86 513 aa11.68□□□□□ -0.54
NPLOC4-219ENST00000576713 PI16Q6UXB8 463 aa11.68□□□□□ -0.54
NPLOC4-219ENST00000576713 KIAA0825Q8IV33 1275 aa11.68□□□□□ -0.54
NPLOC4-219ENST00000576713 ZNF516Q92618 1163 aa11.68□□□□□ -0.54
NPLOC4-219ENST00000576713 DBNDD2Q9BQY9 259 aa11.68□□□□□ -0.54
NPLOC4-219ENST00000576713 IL21Q9HBE4 155 aa11.68□□□□□ -0.54
NPLOC4-219ENST00000576713 IL1RAPL2Q9NP60 686 aa11.68□□□□□ -0.54
NPLOC4-219ENST00000576713 DBNLQ9UJU6 430 aaKnown RBP11.68□□□□□ -0.54
NPLOC4-219ENST00000576713 IQCA1LA6NCM1 817 aa11.67□□□□□ -0.54
NPLOC4-219ENST00000576713 RPS12P25398 132 aaKnown RBP11.67□□□□□ -0.54
NPLOC4-219ENST00000576713 CHAF1AQ13111 956 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-219ENST00000576713 OS9Q13438 667 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-219ENST00000576713 AGBL3Q8NEM8 1001 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms