RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 CDX2Q99626 313 aaPredicted RBP7.45□□□□□ -1.22
SMG6-219ENST00000575663 IQSEC3Q9UPP2 1182 aaPredicted RBP7.45□□□□□ -1.22
SMG6-219ENST00000575663 MYBBP1AQ9BQG0 1328 aaKnown RBP7.45□□□□□ -1.22
SMG6-219ENST00000575663 EYSQ5T1H1 3165 aa7.45□□□□□ -1.22
SMG6-219ENST00000575663 SLC4A2P04920 1241 aa7.44□□□□□ -1.22
SMG6-219ENST00000575663 PTPRAP18433 802 aa7.44□□□□□ -1.22
SMG6-219ENST00000575663 GCLCP48506 637 aaPredicted RBP7.44□□□□□ -1.22
SMG6-219ENST00000575663 FOXO4P98177 505 aa7.44□□□□□ -1.22
SMG6-219ENST00000575663 GRIK5Q16478 980 aa7.44□□□□□ -1.22
SMG6-219ENST00000575663 TJAP1Q5JTD0 557 aa7.44□□□□□ -1.22
SMG6-219ENST00000575663 TRMT44Q8IYL2 757 aaKnown RBP7.44□□□□□ -1.22
SMG6-219ENST00000575663 TSPYL6Q8N831 410 aa7.44□□□□□ -1.22
SMG6-219ENST00000575663 SOCS4Q8WXH5 440 aa7.44□□□□□ -1.22
SMG6-219ENST00000575663 ZNF594Q96JF6 807 aaPredicted RBP7.44□□□□□ -1.22
SMG6-219ENST00000575663 AFG3L2Q9Y4W6 797 aa7.44□□□□□ -1.22
SMG6-219ENST00000575663 LRRFIP2Q9Y608 721 aaKnown RBP7.44□□□□□ -1.22
SMG6-219ENST00000575663 MUC3AQ02505 3323 aa7.44□□□□□ -1.22
SMG6-219ENST00000575663 MROH5Q6ZUA9 1318 aa7.44□□□□□ -1.22
SMG6-219ENST00000575663 DDX60LQ5H9U9 1706 aaKnown RBP7.44□□□□□ -1.22
SMG6-219ENST00000575663 A0A1B0GUL6 1792 aa7.43□□□□□ -1.22
SMG6-219ENST00000575663 TMEM265A0A087WTH1 108 aa7.43□□□□□ -1.22
SMG6-219ENST00000575663 TRIM75PA6NK02 468 aa7.43□□□□□ -1.22
SMG6-219ENST00000575663 COL6A1P12109 1028 aa7.43□□□□□ -1.22
SMG6-219ENST00000575663 PRKAR2AP13861 404 aaKnown RBP7.43□□□□□ -1.22
SMG6-219ENST00000575663 TRIM32Q13049 653 aa7.43□□□□□ -1.22
SMG6-219ENST00000575663 LRRC26Q2I0M4 334 aa7.43□□□□□ -1.22
SMG6-219ENST00000575663 TWISTNBQ3B726 338 aaPredicted RBP7.43□□□□□ -1.22
SMG6-219ENST00000575663 G2E3Q7L622 706 aa7.43□□□□□ -1.22
SMG6-219ENST00000575663 FBXO33Q7Z6M2 555 aa7.43□□□□□ -1.22
SMG6-219ENST00000575663 PROCA1Q8NCQ7 364 aaPredicted RBP7.43□□□□□ -1.22
SMG6-219ENST00000575663 MYLIPQ8WY64 445 aa7.43□□□□□ -1.22
SMG6-219ENST00000575663 TRIB2Q92519 343 aa7.43□□□□□ -1.22
SMG6-219ENST00000575663 ALPK3Q96L96 1907 aa7.42□□□□□ -1.22
SMG6-219ENST00000575663 GRM8O00222 908 aa7.42□□□□□ -1.22
SMG6-219ENST00000575663 IFIT1P09914 478 aaKnown RBP7.42□□□□□ -1.22
SMG6-219ENST00000575663 ZKSCAN1P17029 563 aaPredicted RBP7.42□□□□□ -1.22
SMG6-219ENST00000575663 SMAD3P84022 425 aaKnown RBP7.42□□□□□ -1.22
SMG6-219ENST00000575663 NFIAQ12857 509 aa7.42□□□□□ -1.22
SMG6-219ENST00000575663 PDE3AQ14432 1141 aa7.42□□□□□ -1.22
SMG6-219ENST00000575663 METTL24Q5JXM2 366 aa7.42□□□□□ -1.22
SMG6-219ENST00000575663 MAP3K21Q5TCX8 1036 aa7.42□□□□□ -1.22
SMG6-219ENST00000575663 ZSCAN29Q8IWY8 852 aaPredicted RBP7.42□□□□□ -1.22
SMG6-219ENST00000575663 WDR66Q8TBY9 1149 aa7.42□□□□□ -1.22
SMG6-219ENST00000575663 TBC1D2Q9BYX2 928 aa7.42□□□□□ -1.22
SMG6-219ENST00000575663 SEMA6BQ9H3T3 888 aa7.42□□□□□ -1.22
SMG6-219ENST00000575663 SPINK5Q9NQ38 1064 aaPredicted RBP7.42□□□□□ -1.22
SMG6-219ENST00000575663 ADAMTS8Q9UP79 889 aa7.42□□□□□ -1.22
SMG6-219ENST00000575663 DAGLAQ9Y4D2 1042 aa7.42□□□□□ -1.22
SMG6-219ENST00000575663 KIF16BQ96L93 1317 aa7.42□□□□□ -1.22
SMG6-219ENST00000575663 ATRNL1Q5VV63 1379 aa7.42□□□□□ -1.22
SMG6-219ENST00000575663 CDH23Q9H251 3354 aa7.41□□□□□ -1.22
SMG6-219ENST00000575663 CTNND1O60716 968 aaKnown RBP7.41□□□□□ -1.22
SMG6-219ENST00000575663 CYP2B6P20813 491 aa7.41□□□□□ -1.22
SMG6-219ENST00000575663 TREML2Q5T2D2 321 aa7.41□□□□□ -1.22
SMG6-219ENST00000575663 CDC42EP5Q6NZY7 148 aa7.41□□□□□ -1.22
SMG6-219ENST00000575663 TSR2Q969E8 191 aaKnown RBP7.41□□□□□ -1.22
SMG6-219ENST00000575663 NUDT12Q9BQG2 462 aa7.41□□□□□ -1.22
SMG6-219ENST00000575663 C9orf78Q9NZ63 289 aaPredicted RBP7.41□□□□□ -1.22
SMG6-219ENST00000575663 FAM198AQ9UFP1 575 aa7.41□□□□□ -1.22
SMG6-219ENST00000575663 GJD2Q9UKL4 321 aa7.41□□□□□ -1.22
SMG6-219ENST00000575663 MGAMO43451 1857 aa7.41□□□□□ -1.22
SMG6-219ENST00000575663 PHF20L1A8MW92 1017 aa7.4□□□□□ -1.22
SMG6-219ENST00000575663 APAF1O14727 1248 aa7.4□□□□□ -1.22
SMG6-219ENST00000575663 MSCO60682 206 aa7.4□□□□□ -1.22
SMG6-219ENST00000575663 ENTPD3O75355 529 aa7.4□□□□□ -1.22
SMG6-219ENST00000575663 PDE8BO95263 885 aa7.4□□□□□ -1.22
SMG6-219ENST00000575663 XRCC5P13010 732 aaKnown RBP7.4□□□□□ -1.22
SMG6-219ENST00000575663 RGS2P41220 211 aa7.4□□□□□ -1.22
SMG6-219ENST00000575663 IRX3P78415 501 aaPredicted RBP7.4□□□□□ -1.22
SMG6-219ENST00000575663 PUM3Q15397 648 aaKnown RBP7.4□□□□□ -1.22
SMG6-219ENST00000575663 DIXDC1Q155Q3 683 aa7.4□□□□□ -1.22
SMG6-219ENST00000575663 NCBP3Q53F19 620 aaKnown RBP7.4□□□□□ -1.22
SMG6-219ENST00000575663 EPHA10Q5JZY3 1008 aa7.4□□□□□ -1.22
SMG6-219ENST00000575663 BEND3Q5T5X7 828 aa7.4□□□□□ -1.22
SMG6-219ENST00000575663 CCAR1Q8IX12 1150 aaKnown RBP7.4□□□□□ -1.22
SMG6-219ENST00000575663 IL27Q8NEV9 243 aa7.4□□□□□ -1.22
SMG6-219ENST00000575663 APBA2Q99767 749 aa7.4□□□□□ -1.22
SMG6-219ENST00000575663 PUS3Q9BZE2 481 aaKnown RBP7.4□□□□□ -1.22
SMG6-219ENST00000575663 SENP6Q9GZR1 1112 aaPredicted RBP7.4□□□□□ -1.22
SMG6-219ENST00000575663 CWC22Q9HCG8 908 aaKnown RBP7.4□□□□□ -1.22
SMG6-219ENST00000575663 USP40Q9NVE5 1235 aa7.4□□□□□ -1.22
SMG6-219ENST00000575663 MORF4L1Q9UBU8 362 aa7.4□□□□□ -1.22
SMG6-219ENST00000575663 LDHBP07195 334 aaKnown RBP7.39□□□□□ -1.23
SMG6-219ENST00000575663 SLC5A1P13866 664 aa7.39□□□□□ -1.23
SMG6-219ENST00000575663 MAPK4P31152 587 aa7.39□□□□□ -1.23
SMG6-219ENST00000575663 RGS3P49796 1198 aa7.39□□□□□ -1.23
SMG6-219ENST00000575663 CACNB2Q08289 660 aaPredicted RBP7.39□□□□□ -1.23
SMG6-219ENST00000575663 ZNF280CQ8ND82 737 aa7.39□□□□□ -1.23
SMG6-219ENST00000575663 IDI2Q9BXS1 227 aa7.39□□□□□ -1.23
SMG6-219ENST00000575663 TTYH1Q9H313 450 aaPredicted RBP7.39□□□□□ -1.23
SMG6-219ENST00000575663 AS3MTQ9HBK9 375 aa7.39□□□□□ -1.23
SMG6-219ENST00000575663 PRDM5Q9NQX1 630 aaPredicted RBP7.39□□□□□ -1.23
SMG6-219ENST00000575663 RAPGEFL1Q9UHV5 662 aa7.39□□□□□ -1.23
SMG6-219ENST00000575663 PRUNE2Q8WUY3 3088 aa7.39□□□□□ -1.23
SMG6-219ENST00000575663 RFX7Q2KHR2 1363 aa7.38□□□□□ -1.23
SMG6-219ENST00000575663 F6X3S4 739 aa7.38□□□□□ -1.23
SMG6-219ENST00000575663 DNM1LO00429 736 aa7.38□□□□□ -1.23
SMG6-219ENST00000575663 PRDX5P30044 214 aa7.38□□□□□ -1.23
SMG6-219ENST00000575663 CCND3P30281 292 aaPredicted RBP7.38□□□□□ -1.23
SMG6-219ENST00000575663 HOXD11P31277 338 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms