RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 LLPHQ9BRT6 129 aaKnown RBP6.29□□□□□ -1.4
LINC01541-202ENST00000568095 HMG20BQ9P0W2 317 aa6.29□□□□□ -1.4
LINC01541-202ENST00000568095 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.29□□□□□ -1.4
LINC01541-202ENST00000568095 AKAP11Q9UKA4 1901 aa6.29□□□□□ -1.4
LINC01541-202ENST00000568095 BECN2A8MW95 431 aa6.29□□□□□ -1.4
LINC01541-202ENST00000568095 H3BQF6 201 aa6.29□□□□□ -1.4
LINC01541-202ENST00000568095 HIP1O00291 1037 aa6.29□□□□□ -1.4
LINC01541-202ENST00000568095 POLR3GO15318 223 aaPredicted RBP6.29□□□□□ -1.4
LINC01541-202ENST00000568095 SURF6O75683 361 aaKnown RBP6.29□□□□□ -1.4
LINC01541-202ENST00000568095 RFX5P48382 616 aaPredicted RBP6.29□□□□□ -1.4
LINC01541-202ENST00000568095 JAKMIP3Q5VZ66 844 aa6.29□□□□□ -1.4
LINC01541-202ENST00000568095 ANKRD13DQ6ZTN6 518 aa6.29□□□□□ -1.4
LINC01541-202ENST00000568095 AOPEPQ8N6M6 819 aa6.29□□□□□ -1.4
LINC01541-202ENST00000568095 LINC00116Q8NCU8 138 aa6.29□□□□□ -1.4
LINC01541-202ENST00000568095 KIFC2Q96AC6 838 aa6.29□□□□□ -1.4
LINC01541-202ENST00000568095 XPO4Q9C0E2 1151 aaKnown RBP6.29□□□□□ -1.4
LINC01541-202ENST00000568095 MRFAP1Q9Y605 127 aa6.29□□□□□ -1.4
LINC01541-202ENST00000568095 MAP3K15Q6ZN16 1313 aa6.29□□□□□ -1.4
LINC01541-202ENST00000568095 LOC102724428A0A0B4J2F2 783 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 A0A1B0GUL7 405 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 A0A1W2PQ27 194 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 A0A1W2PQ64 194 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 A0A1W2PQD8 194 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 VWA3AA6NCI4 1184 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 H7C1W4 665 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 GRM8O00222 908 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 NPHP1O15259 732 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 PTCD1O75127 700 aaKnown RBP6.28□□□□□ -1.4
LINC01541-202ENST00000568095 MYL6BP14649 208 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 SFPQP23246 707 aaKnown RBP eCLIP6.28□□□□□ -1.4
LINC01541-202ENST00000568095 IL6STP40189 918 aaPredicted RBP6.28□□□□□ -1.4
LINC01541-202ENST00000568095 SIK1P57059 783 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 SWT1Q5T5J6 900 aaKnown RBP6.28□□□□□ -1.4
LINC01541-202ENST00000568095 C10orf67Q8IYJ2 551 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 SUCLG2Q96I99 432 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 NCAPGQ9BPX3 1015 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 PLA2G12BQ9BX93 195 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 ECHDC1Q9NTX5 307 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 RAB21Q9UL25 225 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 ZBTB1Q9Y2K1 713 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 MYH7P12883 1935 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 SALL1Q9NSC2 1324 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 CCDC151A5D8V7 595 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 IKBKBO14920 756 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 GYS2P54840 703 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 EVCP57679 992 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 FOXO4P98177 505 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 BRD3Q15059 726 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 BLOC1S2Q6QNY1 142 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 PACS2Q86VP3 889 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 CERS3Q8IU89 383 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 BRF1Q92994 677 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 CARD6Q9BX69 1037 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 ZNF646O15015 1829 aaPredicted RBP6.28□□□□□ -1.4
LINC01541-202ENST00000568095 TAF1P21675 1872 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 ERVV-1B6SEH8 477 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 MYO1BO43795 1136 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 DDX58O95786 925 aaKnown RBP6.28□□□□□ -1.4
LINC01541-202ENST00000568095 GTF2A1P52655 376 aaPredicted RBP6.28□□□□□ -1.4
LINC01541-202ENST00000568095 GSCP56915 257 aaPredicted RBP6.28□□□□□ -1.4
LINC01541-202ENST00000568095 CORO7P57737 925 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 AMHR2Q16671 573 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 EPHA10Q5JZY3 1008 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 SEPT12Q8IYM1 358 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 ACSBG1Q96GR2 724 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 PARD6BQ9BYG5 372 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 ARFGAP3Q9NP61 516 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 TAF6LQ9Y6J9 622 aa6.28□□□□□ -1.4
LINC01541-202ENST00000568095 UBN2Q6ZU65 1347 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 KIAA1551Q9HCM1 1747 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 JAK2O60674 1132 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 PPP1R37O75864 691 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 CAMTA2O94983 1202 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 ATP2B1P20020 1258 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 TNNT3P45378 269 aaPredicted RBP6.27□□□□□ -1.41
LINC01541-202ENST00000568095 TBX2Q13207 712 aaPredicted RBP6.27□□□□□ -1.41
LINC01541-202ENST00000568095 TMC6Q7Z403 805 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 AMIGO3Q86WK7 504 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 MNS1Q8NEH6 495 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 IFNKQ9P0W0 207 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 KIAA1468Q9P260 1216 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 RFX7Q2KHR2 1363 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 DLEC1Q9Y238 1755 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 RIC1Q4ADV7 1423 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 SRGAP3O43295 1099 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 PFKFB2O60825 505 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 TXLNAP40222 546 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 CRKLP46109 303 aaKnown RBP6.27□□□□□ -1.41
LINC01541-202ENST00000568095 NMIQ13287 307 aaPredicted RBP6.27□□□□□ -1.41
LINC01541-202ENST00000568095 LONRF2Q1L5Z9 754 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 BEND6Q5SZJ8 279 aaPredicted RBP6.27□□□□□ -1.41
LINC01541-202ENST00000568095 RC3H1Q5TC82 1133 aaKnown RBP6.27□□□□□ -1.41
LINC01541-202ENST00000568095 ADALQ6DHV7 355 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 ZNF34Q8IZ26 560 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 MSANTD4Q8NCY6 345 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 SMARCC1Q92922 1105 aaPredicted RBP6.27□□□□□ -1.41
LINC01541-202ENST00000568095 MYD88Q99836 296 aa6.27□□□□□ -1.41
LINC01541-202ENST00000568095 BICC1Q9H694 974 aaKnown RBP6.27□□□□□ -1.41
LINC01541-202ENST00000568095 QTRT2Q9H974 415 aaKnown RBP6.27□□□□□ -1.41
LINC01541-202ENST00000568095 MKRN1Q9UHC7 482 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms