RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 C3orf67Q6ZVT6 689 aa13.29□□□□□ -0.28
DDB1-224ENST00000545894 CHST3Q7LGC8 479 aa13.29□□□□□ -0.28
DDB1-224ENST00000545894 ATG9AQ7Z3C6 839 aa13.29□□□□□ -0.28
DDB1-224ENST00000545894 NRXN2Q9P2S2 1712 aa13.29□□□□□ -0.28
DDB1-224ENST00000545894 RNF113AO15541 343 aaKnown RBP13.29□□□□□ -0.28
DDB1-224ENST00000545894 YEATS4O95619 227 aa13.29□□□□□ -0.28
DDB1-224ENST00000545894 FOXO4P98177 505 aa13.29□□□□□ -0.28
DDB1-224ENST00000545894 DPCR1Q3MIW9 517 aa13.29□□□□□ -0.28
DDB1-224ENST00000545894 ZNF771Q7L3S4 317 aaPredicted RBP13.29□□□□□ -0.28
DDB1-224ENST00000545894 KRT222Q8N1A0 295 aa13.29□□□□□ -0.28
DDB1-224ENST00000545894 POLR3EQ9NVU0 708 aa13.29□□□□□ -0.28
DDB1-224ENST00000545894 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.29□□□□□ -0.28
DDB1-224ENST00000545894 V9GYY5 206 aaPredicted RBP13.29□□□□□ -0.28
DDB1-224ENST00000545894 SMC2O95347 1197 aa13.28□□□□□ -0.28
DDB1-224ENST00000545894 IL15P40933 162 aaPredicted RBP13.28□□□□□ -0.28
DDB1-224ENST00000545894 TIMM10P62072 90 aa13.28□□□□□ -0.28
DDB1-224ENST00000545894 TPM4P67936 248 aa13.28□□□□□ -0.28
DDB1-224ENST00000545894 ELF2Q15723 593 aa13.28□□□□□ -0.28
DDB1-224ENST00000545894 PLA2G12BQ9BX93 195 aa13.28□□□□□ -0.28
DDB1-224ENST00000545894 XPO4Q9C0E2 1151 aaKnown RBP13.28□□□□□ -0.28
DDB1-224ENST00000545894 PDE8AO60658 829 aa13.28□□□□□ -0.28
DDB1-224ENST00000545894 KCNJ6P48051 423 aa13.28□□□□□ -0.28
DDB1-224ENST00000545894 E4F1Q66K89 784 aaPredicted RBP13.28□□□□□ -0.28
DDB1-224ENST00000545894 C8orf76Q96K31 380 aa13.28□□□□□ -0.28
DDB1-224ENST00000545894 IFNKQ9P0W0 207 aa13.28□□□□□ -0.28
DDB1-224ENST00000545894 CLIC4Q9Y696 253 aa13.28□□□□□ -0.28
DDB1-224ENST00000545894 SPTLC2O15270 562 aa13.27□□□□□ -0.28
DDB1-224ENST00000545894 NRDCO43847 1150 aa13.27□□□□□ -0.28
DDB1-224ENST00000545894 DHX16O60231 1041 aaKnown RBP13.27□□□□□ -0.28
DDB1-224ENST00000545894 SLC3A2P08195 630 aaKnown RBP13.27□□□□□ -0.28
DDB1-224ENST00000545894 IFIT1P09914 478 aaKnown RBP13.27□□□□□ -0.28
DDB1-224ENST00000545894 SFPQP23246 707 aaKnown RBP eCLIP13.27□□□□□ -0.28
DDB1-224ENST00000545894 TTLL5Q6EMB2 1281 aa13.27□□□□□ -0.28
DDB1-224ENST00000545894 FBXO38Q6PIJ6 1188 aa13.27□□□□□ -0.28
DDB1-224ENST00000545894 TMC6Q7Z403 805 aa13.27□□□□□ -0.28
DDB1-224ENST00000545894 BRAPQ7Z569 592 aa13.27□□□□□ -0.28
DDB1-224ENST00000545894 PPP1R13BQ96KQ4 1090 aa13.27□□□□□ -0.28
DDB1-224ENST00000545894 BRIP1Q9BX63 1249 aa13.27□□□□□ -0.28
DDB1-224ENST00000545894 L2HGDHQ9H9P8 463 aa13.27□□□□□ -0.28
DDB1-224ENST00000545894 NEDD4P46934 1319 aa13.27□□□□□ -0.29
DDB1-224ENST00000545894 M0R2C6 588 aa13.27□□□□□ -0.29
DDB1-224ENST00000545894 TUBB4AP04350 444 aa13.27□□□□□ -0.29
DDB1-224ENST00000545894 NLRP12P59046 1061 aa13.27□□□□□ -0.29
DDB1-224ENST00000545894 OTUD7BQ6GQQ9 843 aa13.27□□□□□ -0.29
DDB1-224ENST00000545894 ARMCX5Q6P1M9 558 aa13.27□□□□□ -0.29
DDB1-224ENST00000545894 NLRP3Q96P20 1036 aa13.27□□□□□ -0.29
DDB1-224ENST00000545894 FAM53CQ9NYF3 392 aa13.27□□□□□ -0.29
DDB1-224ENST00000545894 POLR3DP05423 398 aaPredicted RBP13.26□□□□□ -0.29
DDB1-224ENST00000545894 SLFN14P0C7P3 912 aa13.26□□□□□ -0.29
DDB1-224ENST00000545894 CTSWP56202 376 aa13.26□□□□□ -0.29
DDB1-224ENST00000545894 MYSM1Q5VVJ2 828 aa13.26□□□□□ -0.29
DDB1-224ENST00000545894 FBXO18Q8NFZ0 1043 aa13.26□□□□□ -0.29
DDB1-224ENST00000545894 TTLL11Q8NHH1 800 aa13.26□□□□□ -0.29
DDB1-224ENST00000545894 C10orf71Q711Q0 1435 aa13.26□□□□□ -0.29
DDB1-224ENST00000545894 KLRG2A4D1S0 409 aaPredicted RBP13.25□□□□□ -0.29
DDB1-224ENST00000545894 ZNF202O95125 648 aa13.25□□□□□ -0.29
DDB1-224ENST00000545894 CSF1RP07333 972 aa13.25□□□□□ -0.29
DDB1-224ENST00000545894 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.25□□□□□ -0.29
DDB1-224ENST00000545894 CCDC85AQ96PX6 553 aaPredicted RBP13.25□□□□□ -0.29
DDB1-224ENST00000545894 GPHNQ9NQX3 736 aaPredicted RBP13.25□□□□□ -0.29
DDB1-224ENST00000545894 ORC3Q9UBD5 711 aaPredicted RBP13.25□□□□□ -0.29
DDB1-224ENST00000545894 DDX60Q8IY21 1712 aaKnown RBP13.25□□□□□ -0.29
DDB1-224ENST00000545894 EYA2O00167 538 aa13.25□□□□□ -0.29
DDB1-224ENST00000545894 NCAPHQ15003 741 aa13.25□□□□□ -0.29
DDB1-224ENST00000545894 SF3B3Q15393 1217 aaKnown RBP13.25□□□□□ -0.29
DDB1-224ENST00000545894 IMMTQ16891 758 aaKnown RBP13.25□□□□□ -0.29
DDB1-224ENST00000545894 LRRFIP1Q32MZ4 808 aaKnown RBP13.25□□□□□ -0.29
DDB1-224ENST00000545894 SYNE3Q6ZMZ3 975 aa13.25□□□□□ -0.29
DDB1-224ENST00000545894 OSBP2Q969R2 916 aa13.25□□□□□ -0.29
DDB1-224ENST00000545894 RIC1Q4ADV7 1423 aa13.25□□□□□ -0.29
DDB1-224ENST00000545894 TNRC6CQ9HCJ0 1690 aaKnown RBP13.25□□□□□ -0.29
DDB1-224ENST00000545894 KLF18A0A0U1RQI7 1052 aa13.24□□□□□ -0.29
DDB1-224ENST00000545894 A0A1B0GUL7 405 aa13.24□□□□□ -0.29
DDB1-224ENST00000545894 GOLGA8BA8MQT2 603 aa13.24□□□□□ -0.29
DDB1-224ENST00000545894 BIN1O00499 593 aa13.24□□□□□ -0.29
DDB1-224ENST00000545894 TAF3Q5VWG9 929 aa13.24□□□□□ -0.29
DDB1-224ENST00000545894 SYT10Q6XYQ8 523 aa13.24□□□□□ -0.29
DDB1-224ENST00000545894 SPEF2Q9C093 1822 aa13.24□□□□□ -0.29
DDB1-224ENST00000545894 IKBKBO14920 756 aa13.24□□□□□ -0.29
DDB1-224ENST00000545894 PRC1O43663 620 aa13.24□□□□□ -0.29
DDB1-224ENST00000545894 CIAO1O76071 339 aa13.24□□□□□ -0.29
DDB1-224ENST00000545894 CMA1P23946 247 aa13.24□□□□□ -0.29
DDB1-224ENST00000545894 PDE6BP35913 854 aa13.24□□□□□ -0.29
DDB1-224ENST00000545894 TERF2Q15554 542 aa13.24□□□□□ -0.29
DDB1-224ENST00000545894 CRY2Q49AN0 593 aa13.24□□□□□ -0.29
DDB1-224ENST00000545894 LRRC24Q50LG9 513 aa13.24□□□□□ -0.29
DDB1-224ENST00000545894 CCDC93Q567U6 631 aa13.24□□□□□ -0.29
DDB1-224ENST00000545894 ANO1Q5XXA6 986 aa13.24□□□□□ -0.29
DDB1-224ENST00000545894 PPP1R1BQ9UD71 204 aaPredicted RBP13.24□□□□□ -0.29
DDB1-224ENST00000545894 HPS5Q9UPZ3 1129 aa13.24□□□□□ -0.29
DDB1-224ENST00000545894 CPLX1O14810 134 aa13.23□□□□□ -0.29
DDB1-224ENST00000545894 CCP110O43303 1012 aa13.23□□□□□ -0.29
DDB1-224ENST00000545894 PFKFB1P16118 471 aa13.23□□□□□ -0.29
DDB1-224ENST00000545894 AXDND1Q5T1B0 1012 aaPredicted RBP13.23□□□□□ -0.29
DDB1-224ENST00000545894 GREM2Q9H772 168 aa13.23□□□□□ -0.29
DDB1-224ENST00000545894 ZFYP08048 801 aaPredicted RBP13.23□□□□□ -0.29
DDB1-224ENST00000545894 H2AFXP16104 143 aaPredicted RBP13.23□□□□□ -0.29
DDB1-224ENST00000545894 CHRNA5P30532 468 aa13.23□□□□□ -0.29
DDB1-224ENST00000545894 HAND2P61296 217 aa13.23□□□□□ -0.29
DDB1-224ENST00000545894 FANCCQ00597 558 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms