RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 EHMT1Q9H9B1 1298 aa9.73□□□□□ -0.85
LEMD3-206ENST00000545026 SNCAIPQ9Y6H5 919 aa9.73□□□□□ -0.85
LEMD3-206ENST00000545026 ATE1O95260 518 aa9.72□□□□□ -0.85
LEMD3-206ENST00000545026 DCAF11Q8TEB1 546 aa9.72□□□□□ -0.85
LEMD3-206ENST00000545026 ANAPC16Q96DE5 110 aa9.72□□□□□ -0.85
LEMD3-206ENST00000545026 FERD3LQ96RJ6 166 aa9.72□□□□□ -0.85
LEMD3-206ENST00000545026 ZNRF3Q9ULT6 936 aa9.72□□□□□ -0.85
LEMD3-206ENST00000545026 PCDHGC5Q9Y5F6 944 aa9.72□□□□□ -0.85
LEMD3-206ENST00000545026 GRIN3BO60391 1043 aa9.71□□□□□ -0.86
LEMD3-206ENST00000545026 GIPRP48546 466 aa9.71□□□□□ -0.86
LEMD3-206ENST00000545026 RAC1P63000 192 aa9.71□□□□□ -0.86
LEMD3-206ENST00000545026 CCDC144BQ3MJ40 725 aa9.71□□□□□ -0.86
LEMD3-206ENST00000545026 HP1BP3Q5SSJ5 553 aaPredicted RBP9.71□□□□□ -0.86
LEMD3-206ENST00000545026 HDXQ7Z353 690 aa9.71□□□□□ -0.86
LEMD3-206ENST00000545026 CKAP2LQ8IYA6 745 aa9.71□□□□□ -0.86
LEMD3-206ENST00000545026 UBASH3BQ8TF42 649 aa9.71□□□□□ -0.86
LEMD3-206ENST00000545026 WDR18Q9BV38 432 aa9.71□□□□□ -0.86
LEMD3-206ENST00000545026 PLVAPQ9BX97 442 aa9.71□□□□□ -0.86
LEMD3-206ENST00000545026 PCDHB14Q9Y5E9 798 aa9.71□□□□□ -0.86
LEMD3-206ENST00000545026 PRR36Q9H6K5 1346 aa9.71□□□□□ -0.86
LEMD3-206ENST00000545026 AOC2O75106 756 aa9.7□□□□□ -0.86
LEMD3-206ENST00000545026 EIF6P56537 245 aaKnown RBP9.7□□□□□ -0.86
LEMD3-206ENST00000545026 HNRNPUQ00839 825 aaKnown RBP eCLIP9.7□□□□□ -0.86
LEMD3-206ENST00000545026 ZC3H12AQ5D1E8 599 aaKnown RBP9.7□□□□□ -0.86
LEMD3-206ENST00000545026 CYFIP1Q7L576 1253 aa9.7□□□□□ -0.86
LEMD3-206ENST00000545026 FAM169BQ8N8A8 192 aa9.7□□□□□ -0.86
LEMD3-206ENST00000545026 PRKAG3Q9UGI9 489 aa9.7□□□□□ -0.86
LEMD3-206ENST00000545026 SYNGAP1Q96PV0 1343 aa9.7□□□□□ -0.86
LEMD3-206ENST00000545026 KLF4O43474 513 aa9.69□□□□□ -0.86
LEMD3-206ENST00000545026 WISP1O95388 367 aa9.69□□□□□ -0.86
LEMD3-206ENST00000545026 IMPDH2P12268 514 aa9.69□□□□□ -0.86
LEMD3-206ENST00000545026 DUOXA2Q1HG44 320 aa9.69□□□□□ -0.86
LEMD3-206ENST00000545026 EXOSC6Q5RKV6 272 aaKnown RBP9.69□□□□□ -0.86
LEMD3-206ENST00000545026 NBPF6Q5VWK0 638 aa9.69□□□□□ -0.86
LEMD3-206ENST00000545026 FBXW10Q5XX13 1052 aa9.69□□□□□ -0.86
LEMD3-206ENST00000545026 ANKS3Q6ZW76 656 aa9.69□□□□□ -0.86
LEMD3-206ENST00000545026 RBBP8NLQ8NC74 664 aaPredicted RBP9.69□□□□□ -0.86
LEMD3-206ENST00000545026 NBPF4Q96M43 638 aa9.69□□□□□ -0.86
LEMD3-206ENST00000545026 TMPRSS13Q9BYE2 586 aa9.69□□□□□ -0.86
LEMD3-206ENST00000545026 TACC3Q9Y6A5 838 aa9.69□□□□□ -0.86
LEMD3-206ENST00000545026 DCDC2CA8MYV0 355 aa9.68□□□□□ -0.86
LEMD3-206ENST00000545026 SLFN14P0C7P3 912 aa9.68□□□□□ -0.86
LEMD3-206ENST00000545026 ELMO3Q96BJ8 720 aa9.68□□□□□ -0.86
LEMD3-206ENST00000545026 CRBNQ96SW2 442 aa9.68□□□□□ -0.86
LEMD3-206ENST00000545026 CORINQ9Y5Q5 1042 aa9.68□□□□□ -0.86
LEMD3-206ENST00000545026 MEGF11A6BM72 1044 aa9.67□□□□□ -0.86
LEMD3-206ENST00000545026 GNB5O14775 395 aa9.67□□□□□ -0.86
LEMD3-206ENST00000545026 SMAD7O15105 426 aaKnown RBP9.67□□□□□ -0.86
LEMD3-206ENST00000545026 HTR3BO95264 441 aa9.67□□□□□ -0.86
LEMD3-206ENST00000545026 RING1Q06587 406 aa9.67□□□□□ -0.86
LEMD3-206ENST00000545026 SERINC3Q13530 473 aa9.67□□□□□ -0.86
LEMD3-206ENST00000545026 KIAA1211Q6ZU35 1233 aa9.67□□□□□ -0.86
LEMD3-206ENST00000545026 C12orf40Q86WS4 652 aa9.67□□□□□ -0.86
LEMD3-206ENST00000545026 OSBPL2Q9H1P3 480 aa9.67□□□□□ -0.86
LEMD3-206ENST00000545026 FAM229AH3BQW9 127 aa9.66□□□□□ -0.86
LEMD3-206ENST00000545026 TRIM28Q13263 835 aaKnown RBP9.66□□□□□ -0.86
LEMD3-206ENST00000545026 LSRQ86X29 649 aaPredicted RBP9.66□□□□□ -0.86
LEMD3-206ENST00000545026 OR6P1Q8NGX9 317 aa9.66□□□□□ -0.86
LEMD3-206ENST00000545026 RUSC1Q9BVN2 902 aa9.66□□□□□ -0.86
LEMD3-206ENST00000545026 ANTXR1Q9H6X2 564 aa9.66□□□□□ -0.86
LEMD3-206ENST00000545026 RAD18Q9NS91 495 aa9.66□□□□□ -0.86
LEMD3-206ENST00000545026 MKL2Q9ULH7 1088 aa9.66□□□□□ -0.86
LEMD3-206ENST00000545026 PPP1R9AQ9ULJ8 1098 aa9.66□□□□□ -0.86
LEMD3-206ENST00000545026 CSADQ9Y600 493 aa9.66□□□□□ -0.86
LEMD3-206ENST00000545026 SPDYE3A6NKU9 549 aa9.65□□□□□ -0.86
LEMD3-206ENST00000545026 WIPF1O43516 503 aa9.65□□□□□ -0.86
LEMD3-206ENST00000545026 LORP23490 312 aaPredicted RBP9.65□□□□□ -0.86
LEMD3-206ENST00000545026 ERVK-24P63145 666 aa9.65□□□□□ -0.86
LEMD3-206ENST00000545026 RAB33AQ14088 237 aa9.65□□□□□ -0.86
LEMD3-206ENST00000545026 IGF2-ASQ6U949 168 aa9.65□□□□□ -0.86
LEMD3-206ENST00000545026 HNRNPLLQ8WVV9 542 aaKnown RBP9.65□□□□□ -0.86
LEMD3-206ENST00000545026 PIF1Q9H611 641 aa9.65□□□□□ -0.86
LEMD3-206ENST00000545026 ZSWIM4Q9H7M6 989 aa9.65□□□□□ -0.86
LEMD3-206ENST00000545026 REV1Q9UBZ9 1251 aa9.65□□□□□ -0.86
LEMD3-206ENST00000545026 HIF3AQ9Y2N7 669 aa9.65□□□□□ -0.86
LEMD3-206ENST00000545026 MEIS3P2A8K0S8 358 aa9.64□□□□□ -0.87
LEMD3-206ENST00000545026 TMPRSS2O15393 492 aa9.64□□□□□ -0.87
LEMD3-206ENST00000545026 ELNP15502 786 aa9.64□□□□□ -0.87
LEMD3-206ENST00000545026 ID3Q02535 119 aa9.64□□□□□ -0.87
LEMD3-206ENST00000545026 TNNI3KQ59H18 835 aa9.64□□□□□ -0.87
LEMD3-206ENST00000545026 GIMAP6Q6P9H5 292 aa9.64□□□□□ -0.87
LEMD3-206ENST00000545026 ACAD11Q709F0 780 aa9.64□□□□□ -0.87
LEMD3-206ENST00000545026 NOP9Q86U38 636 aaKnown RBP9.64□□□□□ -0.87
LEMD3-206ENST00000545026 SUGCTQ9HAC7 445 aa9.64□□□□□ -0.87
LEMD3-206ENST00000545026 CRIM1Q9NZV1 1036 aa9.64□□□□□ -0.87
LEMD3-206ENST00000545026 PRAMEF27A3QJZ7 478 aa9.63□□□□□ -0.87
LEMD3-206ENST00000545026 PIK3R2O00459 728 aa9.63□□□□□ -0.87
LEMD3-206ENST00000545026 PLCG1P19174 1290 aa9.63□□□□□ -0.87
LEMD3-206ENST00000545026 GRK4P32298 578 aa9.63□□□□□ -0.87
LEMD3-206ENST00000545026 PDE4BQ07343 736 aa9.63□□□□□ -0.87
LEMD3-206ENST00000545026 LRRFIP1Q32MZ4 808 aaKnown RBP9.63□□□□□ -0.87
LEMD3-206ENST00000545026 AKAP4Q5JQC9 854 aa9.63□□□□□ -0.87
LEMD3-206ENST00000545026 PPM1JQ5JR12 505 aa9.63□□□□□ -0.87
LEMD3-206ENST00000545026 TMEM201Q5SNT2 666 aa9.63□□□□□ -0.87
LEMD3-206ENST00000545026 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.63□□□□□ -0.87
LEMD3-206ENST00000545026 SMG8Q8ND04 991 aaKnown RBP9.63□□□□□ -0.87
LEMD3-206ENST00000545026 MRPL18Q9H0U6 180 aaKnown RBP9.63□□□□□ -0.87
LEMD3-206ENST00000545026 RNF208Q9H0X6 261 aa9.63□□□□□ -0.87
LEMD3-206ENST00000545026 DNAJA2O60884 412 aa9.62□□□□□ -0.87
LEMD3-206ENST00000545026 CASP7P55210 303 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms