RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 TEKT1Q969V4 418 aa20.13■□□□□ 0.81
DDX55-212ENST00000544738 ZNF341Q9BYN7 854 aa20.13■□□□□ 0.81
DDX55-212ENST00000544738 ADGRA2Q96PE1 1338 aa20.12■□□□□ 0.81
DDX55-212ENST00000544738 ELNP15502 786 aa20.12■□□□□ 0.81
DDX55-212ENST00000544738 ATP2B3Q16720 1220 aa20.12■□□□□ 0.81
DDX55-212ENST00000544738 WDR66Q8TBY9 1149 aa20.12■□□□□ 0.81
DDX55-212ENST00000544738 PAWRQ96IZ0 340 aaKnown RBP20.12■□□□□ 0.81
DDX55-212ENST00000544738 COPRSQ9NQ92 184 aa20.12■□□□□ 0.81
DDX55-212ENST00000544738 INHAP05111 366 aa20.11■□□□□ 0.81
DDX55-212ENST00000544738 CYP2C8P10632 490 aa20.11■□□□□ 0.81
DDX55-212ENST00000544738 HNRNPUQ00839 825 aaKnown RBP eCLIP20.11■□□□□ 0.81
DDX55-212ENST00000544738 ATF7IPQ6VMQ6 1270 aa20.11■□□□□ 0.81
DDX55-212ENST00000544738 FAM83AQ86UY5 434 aa20.11■□□□□ 0.81
DDX55-212ENST00000544738 FRAT1Q92837 279 aaPredicted RBP20.11■□□□□ 0.81
DDX55-212ENST00000544738 PARK7Q99497 189 aaKnown RBP20.11■□□□□ 0.81
DDX55-212ENST00000544738 GNL3LQ9NVN8 582 aaKnown RBP20.11■□□□□ 0.81
DDX55-212ENST00000544738 STXBP5LQ9Y2K9 1186 aa20.11■□□□□ 0.81
DDX55-212ENST00000544738 BCAR3O75815 825 aa20.1■□□□□ 0.81
DDX55-212ENST00000544738 TRIM27P14373 513 aa20.1■□□□□ 0.81
DDX55-212ENST00000544738 FLT3LGP49771 235 aa20.1■□□□□ 0.81
DDX55-212ENST00000544738 GPR153Q6NV75 609 aa20.1■□□□□ 0.81
DDX55-212ENST00000544738 GDF15Q99988 308 aa20.1■□□□□ 0.81
DDX55-212ENST00000544738 TAOK2Q9UL54 1235 aa20.1■□□□□ 0.81
DDX55-212ENST00000544738 ZMYND8Q9ULU4 1186 aaPredicted RBP20.1■□□□□ 0.81
DDX55-212ENST00000544738 BCRP11274 1271 aa20.09■□□□□ 0.81
DDX55-212ENST00000544738 MTX1Q13505 466 aa20.09■□□□□ 0.81
DDX55-212ENST00000544738 MOGSQ13724 837 aa20.09■□□□□ 0.81
DDX55-212ENST00000544738 HHIPL2Q6UWX4 724 aa20.09■□□□□ 0.81
DDX55-212ENST00000544738 C7orf61Q8IZ16 206 aa20.09■□□□□ 0.81
DDX55-212ENST00000544738 ZDHHC15Q96MV8 337 aa20.09■□□□□ 0.81
DDX55-212ENST00000544738 COL25A1Q9BXS0 654 aaPredicted RBP20.09■□□□□ 0.81
DDX55-212ENST00000544738 KCNH4Q9UQ05 1017 aa20.09■□□□□ 0.81
DDX55-212ENST00000544738 SRGAP3O43295 1099 aa20.08■□□□□ 0.81
DDX55-212ENST00000544738 BMP8BP34820 402 aa20.08■□□□□ 0.81
DDX55-212ENST00000544738 APOBEC3HQ6NTF7 200 aaKnown RBP20.08■□□□□ 0.81
DDX55-212ENST00000544738 NECAB2Q7Z6G3 386 aa20.08■□□□□ 0.81
DDX55-212ENST00000544738 PA2G4Q9UQ80 394 aaKnown RBP20.08■□□□□ 0.81
DDX55-212ENST00000544738 SEMA3EO15041 775 aa20.07■□□□□ 0.8
DDX55-212ENST00000544738 FKBP1CQ5VVH2 108 aa20.07■□□□□ 0.8
DDX55-212ENST00000544738 GPAT2Q6NUI2 795 aa20.07■□□□□ 0.8
DDX55-212ENST00000544738 DIS3LQ8TF46 1054 aaKnown RBP20.07■□□□□ 0.8
DDX55-212ENST00000544738 MTMR10Q9NXD2 777 aa20.07■□□□□ 0.8
DDX55-212ENST00000544738 ZBTB22O15209 634 aa20.06■□□□□ 0.8
DDX55-212ENST00000544738 GNAI2P04899 355 aa20.06■□□□□ 0.8
DDX55-212ENST00000544738 CAPN2P17655 700 aa20.06■□□□□ 0.8
DDX55-212ENST00000544738 ZKSCAN2Q63HK3 967 aa20.06■□□□□ 0.8
DDX55-212ENST00000544738 PXYLP1Q8TE99 480 aa20.06■□□□□ 0.8
DDX55-212ENST00000544738 CLUAP1Q96AJ1 413 aa20.06■□□□□ 0.8
DDX55-212ENST00000544738 DENND2AQ9ULE3 1009 aa20.06■□□□□ 0.8
DDX55-212ENST00000544738 AKAP2Q9Y2D5 859 aa20.06■□□□□ 0.8
DDX55-212ENST00000544738 TNPO2O14787 897 aaKnown RBP20.05■□□□□ 0.8
DDX55-212ENST00000544738 SYN1P17600 705 aa20.05■□□□□ 0.8
DDX55-212ENST00000544738 TCP10Q12799 353 aa20.05■□□□□ 0.8
DDX55-212ENST00000544738 ZNF112Q9UJU3 913 aa20.05■□□□□ 0.8
DDX55-212ENST00000544738 CXCL11O14625 94 aa20.04■□□□□ 0.8
DDX55-212ENST00000544738 LRIT3Q3SXY7 679 aa20.04■□□□□ 0.8
DDX55-212ENST00000544738 CRISPLD2Q9H0B8 497 aa20.04■□□□□ 0.8
DDX55-212ENST00000544738 PAK6Q9NQU5 681 aaPredicted RBP20.04■□□□□ 0.8
DDX55-212ENST00000544738 SALL1Q9NSC2 1324 aa20.03■□□□□ 0.8
DDX55-212ENST00000544738 LDHBP07195 334 aaKnown RBP20.03■□□□□ 0.8
DDX55-212ENST00000544738 PHKA1P46020 1223 aa20.03■□□□□ 0.8
DDX55-212ENST00000544738 CCDC102BQ68D86 513 aa20.03■□□□□ 0.8
DDX55-212ENST00000544738 FAM151AQ8WW52 585 aa20.03■□□□□ 0.8
DDX55-212ENST00000544738 MYH13Q9UKX3 1938 aa20.03■□□□□ 0.8
DDX55-212ENST00000544738 MAGEA10P43363 369 aaPredicted RBP20.02■□□□□ 0.8
DDX55-212ENST00000544738 IRF5Q13568 498 aa20.02■□□□□ 0.8
DDX55-212ENST00000544738 GADL1Q6ZQY3 521 aa20.02■□□□□ 0.8
DDX55-212ENST00000544738 FASTKD5Q7L8L6 764 aaKnown RBP20.02■□□□□ 0.8
DDX55-212ENST00000544738 TDHQ8IZJ6 230 aa20.02■□□□□ 0.8
DDX55-212ENST00000544738 ZGPATQ8N5A5 531 aaKnown RBP20.02■□□□□ 0.8
DDX55-212ENST00000544738 TNNQ9UQP3 1299 aa20.02■□□□□ 0.8
DDX55-212ENST00000544738 ZHX2Q9Y6X8 837 aa20.02■□□□□ 0.8
DDX55-212ENST00000544738 PRDX5P30044 214 aa20.01■□□□□ 0.79
DDX55-212ENST00000544738 TIMM10P62072 90 aa20.01■□□□□ 0.79
DDX55-212ENST00000544738 TFCP2Q12800 502 aa20.01■□□□□ 0.79
DDX55-212ENST00000544738 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.01■□□□□ 0.79
DDX55-212ENST00000544738 COA7Q96BR5 231 aa20.01■□□□□ 0.79
DDX55-212ENST00000544738 UBE2OQ9C0C9 1292 aaKnown RBP20.01■□□□□ 0.79
DDX55-212ENST00000544738 PDS5AQ29RF7 1337 aaKnown RBP20.01■□□□□ 0.79
DDX55-212ENST00000544738 A0A1B0GUL7 405 aa20■□□□□ 0.79
DDX55-212ENST00000544738 G3BP1Q13283 466 aaKnown RBP eCLIP20■□□□□ 0.79
DDX55-212ENST00000544738 MVPQ14764 893 aaKnown RBP20■□□□□ 0.79
DDX55-212ENST00000544738 NOL9Q5SY16 702 aaKnown RBP20■□□□□ 0.79
DDX55-212ENST00000544738 TMEM57Q8N5G2 664 aa20■□□□□ 0.79
DDX55-212ENST00000544738 SMCR8Q8TEV9 937 aaPredicted RBP20■□□□□ 0.79
DDX55-212ENST00000544738 XRN2Q9H0D6 950 aaKnown RBP eCLIP20■□□□□ 0.79
DDX55-212ENST00000544738 DAGLAQ9Y4D2 1042 aa20■□□□□ 0.79
DDX55-212ENST00000544738 VCANP13611 3396 aa20■□□□□ 0.79
DDX55-212ENST00000544738 LAMA2P24043 3122 aaKnown RBP19.99■□□□□ 0.79
DDX55-212ENST00000544738 RPAP1Q9BWH6 1393 aaPredicted RBP19.99■□□□□ 0.79
DDX55-212ENST00000544738 ADORA1P30542 326 aa19.99■□□□□ 0.79
DDX55-212ENST00000544738 DIXDC1Q155Q3 683 aa19.99■□□□□ 0.79
DDX55-212ENST00000544738 FTSJ3Q8IY81 847 aaKnown RBP19.99■□□□□ 0.79
DDX55-212ENST00000544738 XAGE2Q96GT9 111 aa19.99■□□□□ 0.79
DDX55-212ENST00000544738 NBPF3Q9H094 633 aa19.99■□□□□ 0.79
DDX55-212ENST00000544738 ZBED9Q6R2W3 1325 aa19.99■□□□□ 0.79
DDX55-212ENST00000544738 A0A0G2JLL6 359 aaPredicted RBP19.98■□□□□ 0.79
DDX55-212ENST00000544738 NFIAQ12857 509 aa19.98■□□□□ 0.79
DDX55-212ENST00000544738 SPTY2D1Q68D10 685 aaPredicted RBP19.98■□□□□ 0.79
DDX55-212ENST00000544738 CDC42EP5Q6NZY7 148 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms