RNA–Protein interactions for RNA: ENST00000543957.5

ITM2C-209, Transcript of integral membrane protein 2C, humanhuman

TSL 5

Gene ITM2C, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-209ENST00000543957 PICK1Q9NRD5 415 aa15.37■□□□□ 0.05
ITM2C-209ENST00000543957 AFG3L2Q9Y4W6 797 aa15.37■□□□□ 0.05
ITM2C-209ENST00000543957 DOCK3Q8IZD9 2030 aa15.37■□□□□ 0.05
ITM2C-209ENST00000543957 PTPRAP18433 802 aa15.36■□□□□ 0.05
ITM2C-209ENST00000543957 SCYL3Q8IZE3 742 aa15.36■□□□□ 0.05
ITM2C-209ENST00000543957 PRKRIP1Q9H875 184 aaPredicted RBP15.36■□□□□ 0.05
ITM2C-209ENST00000543957 PFASO15067 1338 aa15.36■□□□□ 0.05
ITM2C-209ENST00000543957 DDX60LQ5H9U9 1706 aaKnown RBP15.35■□□□□ 0.05
ITM2C-209ENST00000543957 NFIAQ12857 509 aa15.35■□□□□ 0.05
ITM2C-209ENST00000543957 TRIM32Q13049 653 aa15.35■□□□□ 0.05
ITM2C-209ENST00000543957 ZNF697Q5TEC3 545 aa15.35■□□□□ 0.05
ITM2C-209ENST00000543957 CDC42EP5Q6NZY7 148 aa15.35■□□□□ 0.05
ITM2C-209ENST00000543957 MAFAQ8NHW3 353 aaPredicted RBP15.35■□□□□ 0.05
ITM2C-209ENST00000543957 MROH5Q6ZUA9 1318 aa15.35■□□□□ 0.05
ITM2C-209ENST00000543957 PHF20L1A8MW92 1017 aa15.34■□□□□ 0.05
ITM2C-209ENST00000543957 COL9A1P20849 921 aa15.34■□□□□ 0.05
ITM2C-209ENST00000543957 FAM110CQ1W6H9 321 aa15.34■□□□□ 0.05
ITM2C-209ENST00000543957 CDX2Q99626 313 aaPredicted RBP15.34■□□□□ 0.05
ITM2C-209ENST00000543957 FAM198AQ9UFP1 575 aa15.34■□□□□ 0.05
ITM2C-209ENST00000543957 GJD2Q9UKL4 321 aa15.34■□□□□ 0.05
ITM2C-209ENST00000543957 AK9Q5TCS8 1911 aa15.34■□□□□ 0.05
ITM2C-209ENST00000543957 COL2A1P02458 1487 aaPredicted RBP15.33■□□□□ 0.05
ITM2C-209ENST00000543957 EYSQ5T1H1 3165 aa15.33■□□□□ 0.04
ITM2C-209ENST00000543957 GRM8O00222 908 aa15.33■□□□□ 0.04
ITM2C-209ENST00000543957 BEND3Q5T5X7 828 aa15.33■□□□□ 0.04
ITM2C-209ENST00000543957 SYMPKQ92797 1274 aaKnown RBP15.33■□□□□ 0.04
ITM2C-209ENST00000543957 AGTPBP1Q9UPW5 1226 aa15.33■□□□□ 0.04
ITM2C-209ENST00000543957 DAGLAQ9Y4D2 1042 aa15.33■□□□□ 0.04
ITM2C-209ENST00000543957 TRIM75PA6NK02 468 aa15.32■□□□□ 0.04
ITM2C-209ENST00000543957 F6X3S4 739 aa15.32■□□□□ 0.04
ITM2C-209ENST00000543957 COL6A1P12109 1028 aa15.32■□□□□ 0.04
ITM2C-209ENST00000543957 LRRC26Q2I0M4 334 aa15.32■□□□□ 0.04
ITM2C-209ENST00000543957 ZFPM1Q8IX07 1006 aa15.32■□□□□ 0.04
ITM2C-209ENST00000543957 LBHD1Q9BQE6 289 aaPredicted RBP15.32■□□□□ 0.04
ITM2C-209ENST00000543957 PNMA3Q9UL41 463 aa15.32■□□□□ 0.04
ITM2C-209ENST00000543957 LAMA2P24043 3122 aaKnown RBP15.31■□□□□ 0.04
ITM2C-209ENST00000543957 METTL24Q5JXM2 366 aa15.31■□□□□ 0.04
ITM2C-209ENST00000543957 TRIB2Q92519 343 aa15.31■□□□□ 0.04
ITM2C-209ENST00000543957 USP40Q9NVE5 1235 aa15.31■□□□□ 0.04
ITM2C-209ENST00000543957 LRRFIP2Q9Y608 721 aaKnown RBP15.31■□□□□ 0.04
ITM2C-209ENST00000543957 PRUNE2Q8WUY3 3088 aa15.3■□□□□ 0.04
ITM2C-209ENST00000543957 PRKAR2AP13861 404 aaKnown RBP15.3■□□□□ 0.04
ITM2C-209ENST00000543957 GCLCP48506 637 aaPredicted RBP15.3■□□□□ 0.04
ITM2C-209ENST00000543957 DIXDC1Q155Q3 683 aa15.3■□□□□ 0.04
ITM2C-209ENST00000543957 TREML2Q5T2D2 321 aa15.3■□□□□ 0.04
ITM2C-209ENST00000543957 MAP3K21Q5TCX8 1036 aa15.3■□□□□ 0.04
ITM2C-209ENST00000543957 ATRNL1Q5VV63 1379 aa15.3■□□□□ 0.04
ITM2C-209ENST00000543957 WDR66Q8TBY9 1149 aa15.3■□□□□ 0.04
ITM2C-209ENST00000543957 SEMA6BQ9H3T3 888 aa15.3■□□□□ 0.04
ITM2C-209ENST00000543957 C9orf78Q9NZ63 289 aaPredicted RBP15.3■□□□□ 0.04
ITM2C-209ENST00000543957 CTNND1O60716 968 aaKnown RBP15.29■□□□□ 0.04
ITM2C-209ENST00000543957 PDE8BO95263 885 aa15.29■□□□□ 0.04
ITM2C-209ENST00000543957 LRRC24Q50LG9 513 aa15.29■□□□□ 0.04
ITM2C-209ENST00000543957 CYP2B6P20813 491 aa15.28■□□□□ 0.04
ITM2C-209ENST00000543957 MAP3K10Q02779 954 aa15.28■□□□□ 0.04
ITM2C-209ENST00000543957 VGLL2Q8N8G2 317 aa15.28■□□□□ 0.04
ITM2C-209ENST00000543957 PTPRFP10586 1907 aa15.27■□□□□ 0.04
ITM2C-209ENST00000543957 IFIT1P09914 478 aaKnown RBP15.27■□□□□ 0.04
ITM2C-209ENST00000543957 CCDC84Q86UT8 332 aaPredicted RBP15.27■□□□□ 0.04
ITM2C-209ENST00000543957 ZSCAN29Q8IWY8 852 aaPredicted RBP15.27■□□□□ 0.04
ITM2C-209ENST00000543957 PROCA1Q8NCQ7 364 aaPredicted RBP15.27■□□□□ 0.04
ITM2C-209ENST00000543957 MYLIPQ8WY64 445 aa15.27■□□□□ 0.04
ITM2C-209ENST00000543957 KAZALD1Q96I82 304 aa15.27■□□□□ 0.04
ITM2C-209ENST00000543957 SUCLG2Q96I99 432 aa15.27■□□□□ 0.04
ITM2C-209ENST00000543957 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.27■□□□□ 0.04
ITM2C-209ENST00000543957 KIF16BQ96L93 1317 aa15.26■□□□□ 0.03
ITM2C-209ENST00000543957 ENTPD3O75355 529 aa15.26■□□□□ 0.03
ITM2C-209ENST00000543957 SLURP2P0DP57 97 aa15.26■□□□□ 0.03
ITM2C-209ENST00000543957 PRDX5P30044 214 aa15.26■□□□□ 0.03
ITM2C-209ENST00000543957 RGS3P49796 1198 aa15.26■□□□□ 0.03
ITM2C-209ENST00000543957 LHX8Q68G74 356 aa15.26■□□□□ 0.03
ITM2C-209ENST00000543957 SH3BP5LQ7L8J4 393 aa15.26■□□□□ 0.03
ITM2C-209ENST00000543957 SPINK5Q9NQ38 1064 aaPredicted RBP15.26■□□□□ 0.03
ITM2C-209ENST00000543957 RAPGEFL1Q9UHV5 662 aa15.26■□□□□ 0.03
ITM2C-209ENST00000543957 MUC3AQ02505 3323 aa15.26■□□□□ 0.03
ITM2C-209ENST00000543957 TNFRSF10AO00220 468 aa15.25■□□□□ 0.03
ITM2C-209ENST00000543957 XRCC5P13010 732 aaKnown RBP15.25■□□□□ 0.03
ITM2C-209ENST00000543957 CACNB2Q08289 660 aaPredicted RBP15.25■□□□□ 0.03
ITM2C-209ENST00000543957 SPP2Q13103 211 aa15.25■□□□□ 0.03
ITM2C-209ENST00000543957 PABPC4Q13310 644 aaKnown RBP eCLIP15.25■□□□□ 0.03
ITM2C-209ENST00000543957 PUM3Q15397 648 aaKnown RBP15.25■□□□□ 0.03
ITM2C-209ENST00000543957 NUDT12Q9BQG2 462 aa15.25■□□□□ 0.03
ITM2C-209ENST00000543957 IDI2Q9BXS1 227 aa15.25■□□□□ 0.03
ITM2C-209ENST00000543957 ASCC2Q9H1I8 757 aaPredicted RBP15.25■□□□□ 0.03
ITM2C-209ENST00000543957 DDTLA6NHG4 134 aaPredicted RBP15.24■□□□□ 0.03
ITM2C-209ENST00000543957 VAMP4O75379 141 aa15.24■□□□□ 0.03
ITM2C-209ENST00000543957 ALDH1L1O75891 902 aa15.24■□□□□ 0.03
ITM2C-209ENST00000543957 LDHBP07195 334 aaKnown RBP15.24■□□□□ 0.03
ITM2C-209ENST00000543957 FOSL2P15408 326 aa15.24■□□□□ 0.03
ITM2C-209ENST00000543957 ZKSCAN1P17029 563 aaPredicted RBP15.24■□□□□ 0.03
ITM2C-209ENST00000543957 FGFR2P21802 821 aa15.24■□□□□ 0.03
ITM2C-209ENST00000543957 CCND3P30281 292 aaPredicted RBP15.24■□□□□ 0.03
ITM2C-209ENST00000543957 SHHQ15465 462 aa15.24■□□□□ 0.03
ITM2C-209ENST00000543957 CCDC184Q52MB2 194 aa15.24■□□□□ 0.03
ITM2C-209ENST00000543957 TJAP1Q5JTD0 557 aa15.24■□□□□ 0.03
ITM2C-209ENST00000543957 TRMT44Q8IYL2 757 aaKnown RBP15.24■□□□□ 0.03
ITM2C-209ENST00000543957 SOCS4Q8WXH5 440 aa15.24■□□□□ 0.03
ITM2C-209ENST00000543957 SENP6Q9GZR1 1112 aaPredicted RBP15.24■□□□□ 0.03
ITM2C-209ENST00000543957 TTYH1Q9H313 450 aaPredicted RBP15.24■□□□□ 0.03
ITM2C-209ENST00000543957 MORF4L1Q9UBU8 362 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms