RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 TRPA1O75762 1119 aa2.16□□□□□ -2.06
COPB1-212ENST00000534771 DLGAP3O95886 979 aa2.16□□□□□ -2.06
COPB1-212ENST00000534771 RPLP1P05386 114 aaKnown RBP2.16□□□□□ -2.06
COPB1-212ENST00000534771 NFICP08651 508 aa2.16□□□□□ -2.06
COPB1-212ENST00000534771 TPRNQ4KMQ1 711 aa2.16□□□□□ -2.06
COPB1-212ENST00000534771 HGSNATQ68CP4 663 aa2.16□□□□□ -2.06
COPB1-212ENST00000534771 USP51Q70EK9 711 aa2.16□□□□□ -2.06
COPB1-212ENST00000534771 ZNF438Q7Z4V0 828 aa2.16□□□□□ -2.06
COPB1-212ENST00000534771 ABTB2Q8N961 1025 aa2.16□□□□□ -2.06
COPB1-212ENST00000534771 C1orf127Q8N9H9 656 aa2.16□□□□□ -2.06
COPB1-212ENST00000534771 TMEM102Q8N9M5 508 aaPredicted RBP2.16□□□□□ -2.06
COPB1-212ENST00000534771 TTC16Q8NEE8 873 aa2.16□□□□□ -2.06
COPB1-212ENST00000534771 NXPE3Q969Y0 559 aa2.16□□□□□ -2.06
COPB1-212ENST00000534771 USP26Q9BXU7 913 aa2.16□□□□□ -2.06
COPB1-212ENST00000534771 SOX17Q9H6I2 414 aaPredicted RBP2.16□□□□□ -2.06
COPB1-212ENST00000534771 CNTN3Q9P232 1028 aa2.16□□□□□ -2.06
COPB1-212ENST00000534771 KANSL3Q9P2N6 904 aa2.16□□□□□ -2.06
COPB1-212ENST00000534771 SOX13Q9UN79 622 aa2.16□□□□□ -2.06
COPB1-212ENST00000534771 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.16□□□□□ -2.06
COPB1-212ENST00000534771 ACPPP15309 386 aa2.15□□□□□ -2.07
COPB1-212ENST00000534771 DLG4P78352 724 aa2.15□□□□□ -2.07
COPB1-212ENST00000534771 GSTM4Q03013 218 aa2.15□□□□□ -2.07
COPB1-212ENST00000534771 OCLNQ16625 522 aa2.15□□□□□ -2.07
COPB1-212ENST00000534771 VMACQ2NL98 169 aa2.15□□□□□ -2.07
COPB1-212ENST00000534771 CDCA8Q53HL2 280 aa2.15□□□□□ -2.07
COPB1-212ENST00000534771 OGFOD3Q6PK18 319 aa2.15□□□□□ -2.07
COPB1-212ENST00000534771 VN1R5Q7Z5H4 357 aa2.15□□□□□ -2.07
COPB1-212ENST00000534771 PROSER2Q86WR7 435 aaPredicted RBP2.15□□□□□ -2.07
COPB1-212ENST00000534771 C2CD4AQ8NCU7 369 aaPredicted RBP2.15□□□□□ -2.07
COPB1-212ENST00000534771 CLUAP1Q96AJ1 413 aa2.15□□□□□ -2.07
COPB1-212ENST00000534771 NUDT16Q96DE0 195 aaKnown RBP2.15□□□□□ -2.07
COPB1-212ENST00000534771 OSMRQ99650 979 aa2.15□□□□□ -2.07
COPB1-212ENST00000534771 RAD18Q9NS91 495 aa2.15□□□□□ -2.07
COPB1-212ENST00000534771 NOVA2Q9UNW9 492 aaKnown RBP2.15□□□□□ -2.07
COPB1-212ENST00000534771 ACIN1Q9UKV3 1341 aaKnown RBP2.15□□□□□ -2.07
COPB1-212ENST00000534771 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.14□□□□□ -2.07
COPB1-212ENST00000534771 TNFRSF10BO14763 440 aa2.14□□□□□ -2.07
COPB1-212ENST00000534771 FZD7O75084 574 aa2.14□□□□□ -2.07
COPB1-212ENST00000534771 ESRRAP11474 423 aaPredicted RBP2.14□□□□□ -2.07
COPB1-212ENST00000534771 SRFP11831 508 aa2.14□□□□□ -2.07
COPB1-212ENST00000534771 PCSK2P16519 638 aa2.14□□□□□ -2.07
COPB1-212ENST00000534771 ZP2Q05996 745 aa2.14□□□□□ -2.07
COPB1-212ENST00000534771 C8orf34Q49A92 452 aa2.14□□□□□ -2.07
COPB1-212ENST00000534771 CYP27C1Q4G0S4 372 aa2.14□□□□□ -2.07
COPB1-212ENST00000534771 CAPN12Q6ZSI9 719 aa2.14□□□□□ -2.07
COPB1-212ENST00000534771 KRTAP5-2Q701N4 177 aa2.14□□□□□ -2.07
COPB1-212ENST00000534771 DYMQ7RTS9 669 aa2.14□□□□□ -2.07
COPB1-212ENST00000534771 FRMD5Q7Z6J6 570 aa2.14□□□□□ -2.07
COPB1-212ENST00000534771 ASAP3Q8TDY4 903 aa2.14□□□□□ -2.07
COPB1-212ENST00000534771 HRASLS5Q96KN8 279 aa2.14□□□□□ -2.07
COPB1-212ENST00000534771 HHIPQ96QV1 700 aa2.14□□□□□ -2.07
COPB1-212ENST00000534771 MKNK1Q9BUB5 465 aa2.14□□□□□ -2.07
COPB1-212ENST00000534771 ZFYVE1Q9HBF4 777 aa2.14□□□□□ -2.07
COPB1-212ENST00000534771 ING1Q9UK53 422 aaPredicted RBP2.14□□□□□ -2.07
COPB1-212ENST00000534771 ACTL7BQ9Y614 415 aa2.14□□□□□ -2.07
COPB1-212ENST00000534771 RFXAPO00287 272 aa2.13□□□□□ -2.07
COPB1-212ENST00000534771 ERBB2P04626 1255 aa2.13□□□□□ -2.07
COPB1-212ENST00000534771 CYP11A1P05108 521 aa2.13□□□□□ -2.07
COPB1-212ENST00000534771 ADH5P11766 374 aa2.13□□□□□ -2.07
COPB1-212ENST00000534771 EDN3P14138 238 aa2.13□□□□□ -2.07
COPB1-212ENST00000534771 ITGB6P18564 788 aa2.13□□□□□ -2.07
COPB1-212ENST00000534771 RAB6AP20340 208 aa2.13□□□□□ -2.07
COPB1-212ENST00000534771 ASPAP45381 313 aa2.13□□□□□ -2.07
COPB1-212ENST00000534771 INHBEP58166 350 aa2.13□□□□□ -2.07
COPB1-212ENST00000534771 FAM69CQ0P6D2 419 aa2.13□□□□□ -2.07
COPB1-212ENST00000534771 KLF10Q13118 480 aa2.13□□□□□ -2.07
COPB1-212ENST00000534771 HP1BP3Q5SSJ5 553 aaPredicted RBP2.13□□□□□ -2.07
COPB1-212ENST00000534771 SEZ6L2Q6UXD5 910 aa2.13□□□□□ -2.07
COPB1-212ENST00000534771 ATCAYQ86WG3 371 aa2.13□□□□□ -2.07
COPB1-212ENST00000534771 ZKSCAN3Q9BRR0 538 aa2.13□□□□□ -2.07
COPB1-212ENST00000534771 GGNBP2Q9H3C7 697 aa2.13□□□□□ -2.07
COPB1-212ENST00000534771 C1GALT1Q9NS00 363 aa2.13□□□□□ -2.07
COPB1-212ENST00000534771 FAM105AQ9NUU6 356 aa2.13□□□□□ -2.07
COPB1-212ENST00000534771 CXXC1Q9P0U4 656 aaPredicted RBP2.13□□□□□ -2.07
COPB1-212ENST00000534771 C1QTNF3-AMACRE9PGA6 284 aa2.12□□□□□ -2.07
COPB1-212ENST00000534771 MAOBP27338 520 aa2.12□□□□□ -2.07
COPB1-212ENST00000534771 IL12RB1P42701 662 aa2.12□□□□□ -2.07
COPB1-212ENST00000534771 DNM1Q05193 864 aaKnown RBP2.12□□□□□ -2.07
COPB1-212ENST00000534771 IKZF1Q13422 519 aa2.12□□□□□ -2.07
COPB1-212ENST00000534771 ELOAQ14241 798 aaKnown RBP2.12□□□□□ -2.07
COPB1-212ENST00000534771 POU4F3Q15319 338 aa2.12□□□□□ -2.07
COPB1-212ENST00000534771 CFAP70Q5T0N1 1121 aa2.12□□□□□ -2.07
COPB1-212ENST00000534771 SCUBE1Q8IWY4 988 aa2.12□□□□□ -2.07
COPB1-212ENST00000534771 PANK1Q8TE04 598 aa2.12□□□□□ -2.07
COPB1-212ENST00000534771 SH3RF3Q8TEJ3 882 aaPredicted RBP2.12□□□□□ -2.07
COPB1-212ENST00000534771 EDEM1Q92611 657 aa2.12□□□□□ -2.07
COPB1-212ENST00000534771 BRIP1Q9BX63 1249 aa2.12□□□□□ -2.07
COPB1-212ENST00000534771 CHRDQ9H2X0 955 aa2.12□□□□□ -2.07
COPB1-212ENST00000534771 LGR6Q9HBX8 967 aa2.12□□□□□ -2.07
COPB1-212ENST00000534771 SMPD4Q9NXE4 827 aa2.12□□□□□ -2.07
COPB1-212ENST00000534771 CNOT11Q9UKZ1 510 aaKnown RBP2.12□□□□□ -2.07
COPB1-212ENST00000534771 HS3ST3A1Q9Y663 406 aa2.12□□□□□ -2.07
COPB1-212ENST00000534771 A6NHS1 94 aa2.11□□□□□ -2.07
COPB1-212ENST00000534771 EREGO14944 169 aa2.11□□□□□ -2.07
COPB1-212ENST00000534771 MZF1P28698 734 aaPredicted RBP2.11□□□□□ -2.07
COPB1-212ENST00000534771 KRTAP10-11P60412 298 aa2.11□□□□□ -2.07
COPB1-212ENST00000534771 TGFB2P61812 414 aa2.11□□□□□ -2.07
COPB1-212ENST00000534771 SSPNQ14714 243 aa2.11□□□□□ -2.07
COPB1-212ENST00000534771 IFI16Q16666 785 aaKnown RBP2.11□□□□□ -2.07
COPB1-212ENST00000534771 NOM1Q5C9Z4 860 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms