RNA–Protein interactions for RNA: ENST00000530535.5

USP35-206, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 2,125 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-206ENST00000530535 ZNF827Q17R98 1081 aa18.02■□□□□ 0.48
USP35-206ENST00000530535 AXDND1Q5T1B0 1012 aaPredicted RBP18.02■□□□□ 0.48
USP35-206ENST00000530535 PI16Q6UXB8 463 aa18.02■□□□□ 0.48
USP35-206ENST00000530535 BRAPQ7Z569 592 aa18.02■□□□□ 0.48
USP35-206ENST00000530535 SDF4Q9BRK5 362 aa18.02■□□□□ 0.48
USP35-206ENST00000530535 AKAP2Q9Y2D5 859 aa18.02■□□□□ 0.48
USP35-206ENST00000530535 RIPOR2Q9Y4F9 1068 aa18.02■□□□□ 0.48
USP35-206ENST00000530535 SPTLC2O15270 562 aa18.02■□□□□ 0.47
USP35-206ENST00000530535 KIF23Q02241 960 aaPredicted RBP18.02■□□□□ 0.47
USP35-206ENST00000530535 DMTNQ08495 405 aa18.02■□□□□ 0.47
USP35-206ENST00000530535 RAB11FIP4Q86YS3 637 aa18.02■□□□□ 0.47
USP35-206ENST00000530535 CCAR2Q8N163 923 aaKnown RBP18.02■□□□□ 0.47
USP35-206ENST00000530535 NCOA7Q8NI08 942 aa18.02■□□□□ 0.47
USP35-206ENST00000530535 NKX2-3Q8TAU0 364 aa18.02■□□□□ 0.47
USP35-206ENST00000530535 FBXW7Q969H0 707 aa18.02■□□□□ 0.47
USP35-206ENST00000530535 ECM29Q5VYK3 1845 aa18.01■□□□□ 0.47
USP35-206ENST00000530535 DHX16O60231 1041 aaKnown RBP18.01■□□□□ 0.47
USP35-206ENST00000530535 CNNM1Q9NRU3 951 aa18.01■□□□□ 0.47
USP35-206ENST00000530535 MROH7-TTC4A0A0A0MT08 1334 aa18.01■□□□□ 0.47
USP35-206ENST00000530535 SPDYE4A6NLX3 237 aa18.01■□□□□ 0.47
USP35-206ENST00000530535 GPAA1O43292 621 aa18.01■□□□□ 0.47
USP35-206ENST00000530535 NCAPHQ15003 741 aa18.01■□□□□ 0.47
USP35-206ENST00000530535 SF3B3Q15393 1217 aaKnown RBP18.01■□□□□ 0.47
USP35-206ENST00000530535 UTP14CQ5TAP6 766 aaKnown RBP18.01■□□□□ 0.47
USP35-206ENST00000530535 SEC31BQ9NQW1 1179 aa18.01■□□□□ 0.47
USP35-206ENST00000530535 COL24A1Q17RW2 1714 aa18.01■□□□□ 0.47
USP35-206ENST00000530535 RTL9Q8NET4 1388 aa18■□□□□ 0.47
USP35-206ENST00000530535 COL4A1P02462 1669 aa18■□□□□ 0.47
USP35-206ENST00000530535 LAMB2P55268 1798 aa18■□□□□ 0.47
USP35-206ENST00000530535 GSDMDP57764 484 aa18■□□□□ 0.47
USP35-206ENST00000530535 SF3A1Q15459 793 aaKnown RBP18■□□□□ 0.47
USP35-206ENST00000530535 GORABQ5T7V8 394 aa18■□□□□ 0.47
USP35-206ENST00000530535 ANO1Q5XXA6 986 aa18■□□□□ 0.47
USP35-206ENST00000530535 RGS22Q8NE09 1264 aa18■□□□□ 0.47
USP35-206ENST00000530535 IMPACTQ9P2X3 320 aa18■□□□□ 0.47
USP35-206ENST00000530535 DENND2AQ9ULE3 1009 aa18■□□□□ 0.47
USP35-206ENST00000530535 ZNF202O95125 648 aa17.99■□□□□ 0.47
USP35-206ENST00000530535 PTPN14Q15678 1187 aa17.99■□□□□ 0.47
USP35-206ENST00000530535 C3orf67Q6ZVT6 689 aa17.99■□□□□ 0.47
USP35-206ENST00000530535 WDHD1O75717 1129 aaPredicted RBP17.99■□□□□ 0.47
USP35-206ENST00000530535 NLRP12P59046 1061 aa17.99■□□□□ 0.47
USP35-206ENST00000530535 METTL24Q5JXM2 366 aa17.99■□□□□ 0.47
USP35-206ENST00000530535 ZNF592Q92610 1267 aa17.99■□□□□ 0.47
USP35-206ENST00000530535 NLRP3Q96P20 1036 aa17.99■□□□□ 0.47
USP35-206ENST00000530535 CAMKK2Q96RR4 588 aa17.99■□□□□ 0.47
USP35-206ENST00000530535 FEZ1Q99689 392 aa17.99■□□□□ 0.47
USP35-206ENST00000530535 XPO4Q9C0E2 1151 aaKnown RBP17.99■□□□□ 0.47
USP35-206ENST00000530535 RGPD3A6NKT7 1758 aaPredicted RBP17.99■□□□□ 0.47
USP35-206ENST00000530535 RGPD4Q7Z3J3 1758 aa17.99■□□□□ 0.47
USP35-206ENST00000530535 ZNF213O14771 459 aa17.98■□□□□ 0.47
USP35-206ENST00000530535 NPHP1O15259 732 aa17.98■□□□□ 0.47
USP35-206ENST00000530535 SLC3A2P08195 630 aaKnown RBP17.98■□□□□ 0.47
USP35-206ENST00000530535 PFKFB1P16118 471 aa17.98■□□□□ 0.47
USP35-206ENST00000530535 CMA1P23946 247 aa17.98■□□□□ 0.47
USP35-206ENST00000530535 MCAMP43121 646 aa17.98■□□□□ 0.47
USP35-206ENST00000530535 EN1Q05925 392 aaPredicted RBP17.98■□□□□ 0.47
USP35-206ENST00000530535 RALYLQ86SE5 291 aaKnown RBP17.98■□□□□ 0.47
USP35-206ENST00000530535 ZMYM6O95789 1325 aa17.98■□□□□ 0.47
USP35-206ENST00000530535 MYO5AQ9Y4I1 1855 aaKnown RBP17.98■□□□□ 0.47
USP35-206ENST00000530535 CASZ1Q86V15 1759 aa17.98■□□□□ 0.47
USP35-206ENST00000530535 TM4SF1P30408 202 aa17.98■□□□□ 0.47
USP35-206ENST00000530535 EZH2Q15910 746 aaKnown RBP17.98■□□□□ 0.47
USP35-206ENST00000530535 ARMCX5Q6P1M9 558 aa17.98■□□□□ 0.47
USP35-206ENST00000530535 TBC1D10CQ8IV04 446 aa17.98■□□□□ 0.47
USP35-206ENST00000530535 FLAD1Q8NFF5 587 aa17.98■□□□□ 0.47
USP35-206ENST00000530535 MPHOSPH8Q99549 860 aa17.98■□□□□ 0.47
USP35-206ENST00000530535 TRMT1Q9NXH9 659 aaKnown RBP17.98■□□□□ 0.47
USP35-206ENST00000530535 CPLX1O14810 134 aa17.97■□□□□ 0.47
USP35-206ENST00000530535 ADD2P35612 726 aa17.97■□□□□ 0.47
USP35-206ENST00000530535 IGHMBP2P38935 993 aaKnown RBP17.97■□□□□ 0.47
USP35-206ENST00000530535 E4F1Q66K89 784 aaPredicted RBP17.97■□□□□ 0.47
USP35-206ENST00000530535 COL23A1Q86Y22 540 aaPredicted RBP17.97■□□□□ 0.47
USP35-206ENST00000530535 CCDC24Q8N4L8 307 aa17.97■□□□□ 0.47
USP35-206ENST00000530535 AIFM3Q96NN9 605 aa17.97■□□□□ 0.47
USP35-206ENST00000530535 HSD3B7Q9H2F3 369 aa17.97■□□□□ 0.47
USP35-206ENST00000530535 IFNKQ9P0W0 207 aa17.97■□□□□ 0.47
USP35-206ENST00000530535 BIN1O00499 593 aa17.96■□□□□ 0.47
USP35-206ENST00000530535 SLC39A14Q15043 492 aa17.96■□□□□ 0.47
USP35-206ENST00000530535 CYB5R4Q7L1T6 521 aa17.96■□□□□ 0.47
USP35-206ENST00000530535 CDC5LQ99459 802 aaKnown RBP17.96■□□□□ 0.47
USP35-206ENST00000530535 CGNQ9P2M7 1197 aaKnown RBP17.96■□□□□ 0.47
USP35-206ENST00000530535 ZNF215Q9UL58 517 aaPredicted RBP17.96■□□□□ 0.47
USP35-206ENST00000530535 HPSEQ9Y251 543 aa17.96■□□□□ 0.47
USP35-206ENST00000530535 SYNE3Q6ZMZ3 975 aa17.96■□□□□ 0.47
USP35-206ENST00000530535 CNBD1Q8NA66 436 aa17.96■□□□□ 0.47
USP35-206ENST00000530535 ANGEL1Q9UNK9 670 aaKnown RBP17.96■□□□□ 0.47
USP35-206ENST00000530535 MROH5Q6ZUA9 1318 aa17.96■□□□□ 0.46
USP35-206ENST00000530535 SH2B2O14492 632 aaPredicted RBP17.95■□□□□ 0.46
USP35-206ENST00000530535 PTPAQ15257 358 aa17.95■□□□□ 0.46
USP35-206ENST00000530535 VGLL2Q8N8G2 317 aa17.95■□□□□ 0.46
USP35-206ENST00000530535 ZNF512BQ96KM6 892 aaPredicted RBP17.95■□□□□ 0.46
USP35-206ENST00000530535 TIGD1Q96MW7 591 aa17.95■□□□□ 0.46
USP35-206ENST00000530535 PDE8BO95263 885 aa17.95■□□□□ 0.46
USP35-206ENST00000530535 SMC2O95347 1197 aa17.95■□□□□ 0.46
USP35-206ENST00000530535 SERPINB2P05120 415 aa17.95■□□□□ 0.46
USP35-206ENST00000530535 SF3B2Q13435 895 aaKnown RBP17.95■□□□□ 0.46
USP35-206ENST00000530535 CCDC150Q8NCX0 1101 aa17.95■□□□□ 0.46
USP35-206ENST00000530535 SENP2Q9HC62 589 aa17.95■□□□□ 0.46
USP35-206ENST00000530535 TUBE1Q9UJT0 475 aa17.95■□□□□ 0.46
USP35-206ENST00000530535 LRP5O75197 1615 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms