RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 MAP3K15Q6ZN16 1313 aa7.21□□□□□ -1.26
CHKA-204ENST00000528235 LRRC37AA6NMS7 1700 aa7.21□□□□□ -1.26
CHKA-204ENST00000528235 CEMIPQ8WUJ3 1361 aa7.2□□□□□ -1.26
CHKA-204ENST00000528235 IBTKQ9P2D0 1353 aaPredicted RBP7.2□□□□□ -1.26
CHKA-204ENST00000528235 YDJCA8MPS7 323 aa7.2□□□□□ -1.26
CHKA-204ENST00000528235 PPFIA3O75145 1194 aa7.2□□□□□ -1.26
CHKA-204ENST00000528235 RPS12P25398 132 aaKnown RBP7.2□□□□□ -1.26
CHKA-204ENST00000528235 FKBP1BP68106 108 aa7.2□□□□□ -1.26
CHKA-204ENST00000528235 PTK2Q05397 1052 aa7.2□□□□□ -1.26
CHKA-204ENST00000528235 WASHC4Q2M389 1173 aa7.2□□□□□ -1.26
CHKA-204ENST00000528235 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.2□□□□□ -1.26
CHKA-204ENST00000528235 KIF4BQ2VIQ3 1234 aa7.2□□□□□ -1.26
CHKA-204ENST00000528235 PPP1R26Q5T8A7 1209 aaPredicted RBP7.2□□□□□ -1.26
CHKA-204ENST00000528235 DDX46Q7L014 1031 aaKnown RBP7.2□□□□□ -1.26
CHKA-204ENST00000528235 DBNDD1Q9H9R9 158 aa7.2□□□□□ -1.26
CHKA-204ENST00000528235 GGA3Q9NZ52 723 aa7.2□□□□□ -1.26
CHKA-204ENST00000528235 RRP7AQ9Y3A4 280 aaKnown RBP7.2□□□□□ -1.26
CHKA-204ENST00000528235 KDM3BQ7LBC6 1761 aa7.2□□□□□ -1.26
CHKA-204ENST00000528235 TTLL8A6PVC2 850 aa7.19□□□□□ -1.26
CHKA-204ENST00000528235 NTSR2O95665 410 aa7.19□□□□□ -1.26
CHKA-204ENST00000528235 EGFRP00533 1210 aa7.19□□□□□ -1.26
CHKA-204ENST00000528235 MYL6BP14649 208 aa7.19□□□□□ -1.26
CHKA-204ENST00000528235 TM4SF4P48230 202 aa7.19□□□□□ -1.26
CHKA-204ENST00000528235 SREBF2Q12772 1141 aa7.19□□□□□ -1.26
CHKA-204ENST00000528235 TPRNQ4KMQ1 711 aa7.19□□□□□ -1.26
CHKA-204ENST00000528235 PARP10Q53GL7 1025 aa7.19□□□□□ -1.26
CHKA-204ENST00000528235 NOM1Q5C9Z4 860 aaKnown RBP7.19□□□□□ -1.26
CHKA-204ENST00000528235 PPP2R2DQ66LE6 453 aa7.19□□□□□ -1.26
CHKA-204ENST00000528235 LRRN4Q8WUT4 740 aa7.19□□□□□ -1.26
CHKA-204ENST00000528235 KCTD15Q96SI1 283 aaPredicted RBP7.19□□□□□ -1.26
CHKA-204ENST00000528235 KDM4CQ9H3R0 1056 aa7.19□□□□□ -1.26
CHKA-204ENST00000528235 DNMT3LQ9UJW3 386 aa7.19□□□□□ -1.26
CHKA-204ENST00000528235 GPSM3Q9Y4H4 160 aa7.19□□□□□ -1.26
CHKA-204ENST00000528235 TRIM17Q9Y577 477 aa7.19□□□□□ -1.26
CHKA-204ENST00000528235 UBN2Q6ZU65 1347 aa7.19□□□□□ -1.26
CHKA-204ENST00000528235 LAMB1P07942 1786 aa7.18□□□□□ -1.26
CHKA-204ENST00000528235 UBE2Q2LH0YL09 131 aa7.18□□□□□ -1.26
CHKA-204ENST00000528235 LORP23490 312 aaPredicted RBP7.18□□□□□ -1.26
CHKA-204ENST00000528235 NF2P35240 595 aa7.18□□□□□ -1.26
CHKA-204ENST00000528235 TCIRG1Q13488 830 aa7.18□□□□□ -1.26
CHKA-204ENST00000528235 NR6A1Q15406 480 aa7.18□□□□□ -1.26
CHKA-204ENST00000528235 ANGEL2Q5VTE6 544 aaKnown RBP7.18□□□□□ -1.26
CHKA-204ENST00000528235 TTLL7Q6ZT98 887 aa7.18□□□□□ -1.26
CHKA-204ENST00000528235 Q6ZVU0 165 aa7.18□□□□□ -1.26
CHKA-204ENST00000528235 MCM10Q7L590 875 aa7.18□□□□□ -1.26
CHKA-204ENST00000528235 TMC4Q7Z404 712 aa7.18□□□□□ -1.26
CHKA-204ENST00000528235 ZNF34Q8IZ26 560 aa7.18□□□□□ -1.26
CHKA-204ENST00000528235 EYA3Q99504 573 aa7.18□□□□□ -1.26
CHKA-204ENST00000528235 UTP14AQ9BVJ6 771 aaKnown RBP7.18□□□□□ -1.26
CHKA-204ENST00000528235 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.18□□□□□ -1.26
CHKA-204ENST00000528235 NSFL1CQ9UNZ2 370 aaKnown RBP7.18□□□□□ -1.26
CHKA-204ENST00000528235 ECM29Q5VYK3 1845 aa7.17□□□□□ -1.26
CHKA-204ENST00000528235 DUOX1Q9NRD9 1551 aa7.17□□□□□ -1.26
CHKA-204ENST00000528235 ECE2O60344 883 aa7.17□□□□□ -1.26
CHKA-204ENST00000528235 AP1G2O75843 785 aa7.17□□□□□ -1.26
CHKA-204ENST00000528235 EN2P19622 333 aaPredicted RBP7.17□□□□□ -1.26
CHKA-204ENST00000528235 BRD2P25440 801 aaKnown RBP7.17□□□□□ -1.26
CHKA-204ENST00000528235 EIF4G2P78344 907 aaKnown RBP eCLIP7.17□□□□□ -1.26
CHKA-204ENST00000528235 GRAPQ13588 217 aa7.17□□□□□ -1.26
CHKA-204ENST00000528235 NBPF20Q3BBV1 942 aa7.17□□□□□ -1.26
CHKA-204ENST00000528235 SLC10A5Q5PT55 438 aa7.17□□□□□ -1.26
CHKA-204ENST00000528235 MOB2Q70IA6 237 aa7.17□□□□□ -1.26
CHKA-204ENST00000528235 PROCA1Q8NCQ7 364 aaPredicted RBP7.17□□□□□ -1.26
CHKA-204ENST00000528235 GRAPLQ8TC17 118 aaPredicted RBP7.17□□□□□ -1.26
CHKA-204ENST00000528235 MKI67P46013 3256 aaKnown RBP7.17□□□□□ -1.26
CHKA-204ENST00000528235 HMGB1P09429 215 aaKnown RBP7.16□□□□□ -1.26
CHKA-204ENST00000528235 PRKAR2BP31323 418 aa7.16□□□□□ -1.26
CHKA-204ENST00000528235 TAF7Q15545 349 aaPredicted RBP7.16□□□□□ -1.26
CHKA-204ENST00000528235 CC2D1BQ5T0F9 858 aaKnown RBP7.16□□□□□ -1.26
CHKA-204ENST00000528235 OTOP1Q7RTM1 612 aa7.16□□□□□ -1.26
CHKA-204ENST00000528235 ERO1AQ96HE7 468 aa7.16□□□□□ -1.26
CHKA-204ENST00000528235 PHACTR3Q96KR7 559 aa7.16□□□□□ -1.26
CHKA-204ENST00000528235 CFHR5Q9BXR6 569 aa7.16□□□□□ -1.26
CHKA-204ENST00000528235 FAM117AQ9C073 453 aa7.16□□□□□ -1.26
CHKA-204ENST00000528235 CENPFP49454 3210 aa7.16□□□□□ -1.26
CHKA-204ENST00000528235 ASTN2O75129 1339 aaPredicted RBP7.16□□□□□ -1.26
CHKA-204ENST00000528235 SPEF2Q9C093 1822 aa7.15□□□□□ -1.26
CHKA-204ENST00000528235 SZT2Q5T011 3432 aa7.15□□□□□ -1.26
CHKA-204ENST00000528235 SPINT1O43278 529 aa7.15□□□□□ -1.26
CHKA-204ENST00000528235 HCLS1P14317 486 aaPredicted RBP7.15□□□□□ -1.26
CHKA-204ENST00000528235 CBLBQ13191 982 aa7.15□□□□□ -1.26
CHKA-204ENST00000528235 CNGB1Q14028 1251 aaPredicted RBP7.15□□□□□ -1.26
CHKA-204ENST00000528235 DCTN1Q14203 1278 aa7.15□□□□□ -1.26
CHKA-204ENST00000528235 SLC4A8Q2Y0W8 1093 aa7.15□□□□□ -1.26
CHKA-204ENST00000528235 ZC3H12CQ9C0D7 883 aaKnown RBP7.15□□□□□ -1.26
CHKA-204ENST00000528235 R3HDMLQ9H3Y0 253 aa7.15□□□□□ -1.26
CHKA-204ENST00000528235 KCNQ5Q9NR82 932 aa7.15□□□□□ -1.26
CHKA-204ENST00000528235 MIS18AQ9NYP9 233 aa7.15□□□□□ -1.26
CHKA-204ENST00000528235 PTPN22Q9Y2R2 807 aa7.15□□□□□ -1.26
CHKA-204ENST00000528235 PITPNM2Q9BZ72 1349 aa7.15□□□□□ -1.26
CHKA-204ENST00000528235 CUL9Q8IWT3 2517 aa7.15□□□□□ -1.27
CHKA-204ENST00000528235 H0YGN5 161 aa7.14□□□□□ -1.27
CHKA-204ENST00000528235 HTATSF1O43719 755 aaKnown RBP7.14□□□□□ -1.27
CHKA-204ENST00000528235 COL3A1P02461 1466 aaPredicted RBP7.14□□□□□ -1.27
CHKA-204ENST00000528235 VIL1P09327 827 aaKnown RBP7.14□□□□□ -1.27
CHKA-204ENST00000528235 HSPA5P11021 654 aaKnown RBP7.14□□□□□ -1.27
CHKA-204ENST00000528235 INHBEP58166 350 aa7.14□□□□□ -1.27
CHKA-204ENST00000528235 PTSQ03393 145 aa7.14□□□□□ -1.27
CHKA-204ENST00000528235 PRKG1Q13976 671 aa7.14□□□□□ -1.27
CHKA-204ENST00000528235 HSP90AB3PQ58FF7 597 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms