RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 H3BQV1 296 aa15.19■□□□□ 0.02
RBM39-243ENST00000528062 CTDNEP1O95476 244 aa15.19■□□□□ 0.02
RBM39-243ENST00000528062 PRELPP51888 382 aa15.19■□□□□ 0.02
RBM39-243ENST00000528062 CHAF1AQ13111 956 aaPredicted RBP15.19■□□□□ 0.02
RBM39-243ENST00000528062 UBE4AQ14139 1066 aa15.19■□□□□ 0.02
RBM39-243ENST00000528062 MCMDC2Q4G0Z9 681 aa15.19■□□□□ 0.02
RBM39-243ENST00000528062 CCDC93Q567U6 631 aa15.19■□□□□ 0.02
RBM39-243ENST00000528062 IFFO2Q5TF58 517 aa15.19■□□□□ 0.02
RBM39-243ENST00000528062 DPP8Q6V1X1 898 aaPredicted RBP15.19■□□□□ 0.02
RBM39-243ENST00000528062 C11orf57Q6ZUT1 292 aaPredicted RBP15.19■□□□□ 0.02
RBM39-243ENST00000528062 NSUN7Q8NE18 718 aaKnown RBP15.19■□□□□ 0.02
RBM39-243ENST00000528062 CACTINQ8WUQ7 758 aaKnown RBP15.19■□□□□ 0.02
RBM39-243ENST00000528062 ANKRD7Q92527 254 aa15.19■□□□□ 0.02
RBM39-243ENST00000528062 LPIN2Q92539 896 aa15.19■□□□□ 0.02
RBM39-243ENST00000528062 LEMD3Q9Y2U8 911 aa15.19■□□□□ 0.02
RBM39-243ENST00000528062 IQCB1Q15051 598 aa15.18■□□□□ 0.02
RBM39-243ENST00000528062 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.18■□□□□ 0.02
RBM39-243ENST00000528062 XAGE2Q96GT9 111 aa15.18■□□□□ 0.02
RBM39-243ENST00000528062 C16orf45Q96MC5 204 aaPredicted RBP15.18■□□□□ 0.02
RBM39-243ENST00000528062 GOLPH3LQ9H4A5 285 aa15.18■□□□□ 0.02
RBM39-243ENST00000528062 GGA1Q9UJY5 639 aa15.18■□□□□ 0.02
RBM39-243ENST00000528062 MYO5AQ9Y4I1 1855 aaKnown RBP15.18■□□□□ 0.02
RBM39-243ENST00000528062 RFX7Q2KHR2 1363 aa15.18■□□□□ 0.02
RBM39-243ENST00000528062 A0A087WWV3 80 aa15.18■□□□□ 0.02
RBM39-243ENST00000528062 PFKFB2O60825 505 aa15.18■□□□□ 0.02
RBM39-243ENST00000528062 PPFIA3O75145 1194 aa15.18■□□□□ 0.02
RBM39-243ENST00000528062 CC2D2BQ6DHV5 1058 aa15.18■□□□□ 0.02
RBM39-243ENST00000528062 ZSCAN16Q9H4T2 348 aaPredicted RBP15.18■□□□□ 0.02
RBM39-243ENST00000528062 CLIP2Q9UDT6 1046 aa15.18■□□□□ 0.02
RBM39-243ENST00000528062 DICER1Q9UPY3 1922 aaKnown RBP15.18■□□□□ 0.02
RBM39-243ENST00000528062 COL1A1P02452 1464 aaPredicted RBP15.18■□□□□ 0.02
RBM39-243ENST00000528062 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.17■□□□□ 0.02
RBM39-243ENST00000528062 ATP2B4P23634 1241 aa15.17■□□□□ 0.02
RBM39-243ENST00000528062 CBX1P83916 185 aa15.17■□□□□ 0.02
RBM39-243ENST00000528062 AKAP2Q9Y2D5 859 aa15.17■□□□□ 0.02
RBM39-243ENST00000528062 GYG1P46976 350 aa15.17■□□□□ 0.02
RBM39-243ENST00000528062 RASSF7Q02833 373 aa15.17■□□□□ 0.02
RBM39-243ENST00000528062 APOBRQ0VD83 1088 aa15.17■□□□□ 0.02
RBM39-243ENST00000528062 FAM84BQ96KN1 310 aaPredicted RBP15.17■□□□□ 0.02
RBM39-243ENST00000528062 NEUROD6Q96NK8 337 aa15.17■□□□□ 0.02
RBM39-243ENST00000528062 PSMD1Q99460 953 aa15.17■□□□□ 0.02
RBM39-243ENST00000528062 CFAP45Q9UL16 551 aa15.17■□□□□ 0.02
RBM39-243ENST00000528062 PSME4Q14997 1843 aa15.17■□□□□ 0.02
RBM39-243ENST00000528062 PHKA1P46020 1223 aa15.16■□□□□ 0.02
RBM39-243ENST00000528062 ARID5BQ14865 1188 aa15.16■□□□□ 0.02
RBM39-243ENST00000528062 C15orf52Q6ZUT6 534 aaKnown RBP15.16■□□□□ 0.02
RBM39-243ENST00000528062 PDCL2Q8N4E4 241 aa15.16■□□□□ 0.02
RBM39-243ENST00000528062 KBTBD3Q8NAB2 608 aa15.16■□□□□ 0.02
RBM39-243ENST00000528062 RCOR1Q9UKL0 485 aa15.16■□□□□ 0.02
RBM39-243ENST00000528062 PTPDC1A2A3K4 754 aa15.16■□□□□ 0.02
RBM39-243ENST00000528062 C6orf229H3BNL8 230 aa15.16■□□□□ 0.02
RBM39-243ENST00000528062 SLC5A1P13866 664 aa15.16■□□□□ 0.02
RBM39-243ENST00000528062 ZSCAN20P17040 1043 aaPredicted RBP15.16■□□□□ 0.02
RBM39-243ENST00000528062 BCAMP50895 628 aa15.16■□□□□ 0.02
RBM39-243ENST00000528062 SNW1Q13573 536 aaKnown RBP15.16■□□□□ 0.02
RBM39-243ENST00000528062 CCAR1Q8IX12 1150 aaKnown RBP15.16■□□□□ 0.02
RBM39-243ENST00000528062 RTKN2Q8IZC4 609 aa15.16■□□□□ 0.02
RBM39-243ENST00000528062 USP28Q96RU2 1077 aa15.16■□□□□ 0.02
RBM39-243ENST00000528062 LLPHQ9BRT6 129 aaKnown RBP15.16■□□□□ 0.02
RBM39-243ENST00000528062 NCOA5Q9HCD5 579 aaKnown RBP15.16■□□□□ 0.02
RBM39-243ENST00000528062 CCT2P78371 535 aaKnown RBP15.15■□□□□ 0.02
RBM39-243ENST00000528062 FGD1P98174 961 aa15.15■□□□□ 0.02
RBM39-243ENST00000528062 FKBP4Q02790 459 aaKnown RBP eCLIP15.15■□□□□ 0.02
RBM39-243ENST00000528062 SCARF1Q14162 830 aa15.15■□□□□ 0.02
RBM39-243ENST00000528062 CCDC102BQ68D86 513 aa15.15■□□□□ 0.02
RBM39-243ENST00000528062 NAA16Q6N069 864 aaPredicted RBP15.15■□□□□ 0.02
RBM39-243ENST00000528062 DHX32Q7L7V1 743 aaKnown RBP15.15■□□□□ 0.02
RBM39-243ENST00000528062 ZNF277Q9NRM2 450 aaPredicted RBP15.15■□□□□ 0.02
RBM39-243ENST00000528062 GOLIM4O00461 696 aa15.15■□□□□ 0.02
RBM39-243ENST00000528062 IFIT1P09914 478 aaKnown RBP15.15■□□□□ 0.02
RBM39-243ENST00000528062 EXOSC10Q01780 885 aaKnown RBP15.15■□□□□ 0.02
RBM39-243ENST00000528062 NCBP1Q09161 790 aaKnown RBP15.15■□□□□ 0.02
RBM39-243ENST00000528062 SOGA3Q5TF21 947 aa15.15■□□□□ 0.02
RBM39-243ENST00000528062 FBXO33Q7Z6M2 555 aa15.15■□□□□ 0.02
RBM39-243ENST00000528062 LTBP3Q9NS15 1303 aa15.14■□□□□ 0.01
RBM39-243ENST00000528062 RIMBP2O15034 1052 aa15.14■□□□□ 0.01
RBM39-243ENST00000528062 TNNT1P13805 278 aa15.14■□□□□ 0.01
RBM39-243ENST00000528062 CDC25BP30305 580 aa15.14■□□□□ 0.01
RBM39-243ENST00000528062 AOC3Q16853 763 aa15.14■□□□□ 0.01
RBM39-243ENST00000528062 SARM1Q6SZW1 724 aa15.14■□□□□ 0.01
RBM39-243ENST00000528062 SALL1Q9NSC2 1324 aa15.14■□□□□ 0.01
RBM39-243ENST00000528062 SPDYE4A6NLX3 237 aa15.14■□□□□ 0.01
RBM39-243ENST00000528062 U2AF2P26368 475 aaKnown RBP eCLIP15.14■□□□□ 0.012e-8■■□□□ 13.9
RBM39-243ENST00000528062 PI16Q6UXB8 463 aa15.14■□□□□ 0.01
RBM39-243ENST00000528062 ENGASEQ8NFI3 743 aa15.14■□□□□ 0.01
RBM39-243ENST00000528062 AGXT2Q9BYV1 514 aa15.14■□□□□ 0.01
RBM39-243ENST00000528062 TMX4Q9H1E5 349 aaPredicted RBP15.14■□□□□ 0.01
RBM39-243ENST00000528062 TAOK3Q9H2K8 898 aa15.14■□□□□ 0.01
RBM39-243ENST00000528062 TIAM2Q8IVF5 1701 aa15.14■□□□□ 0.01
RBM39-243ENST00000528062 CAVIN2O95810 425 aa15.13■□□□□ 0.01
RBM39-243ENST00000528062 GUCY1B3Q02153 619 aa15.13■□□□□ 0.01
RBM39-243ENST00000528062 NAA30Q147X3 362 aaPredicted RBP15.13■□□□□ 0.01
RBM39-243ENST00000528062 WASHC4Q2M389 1173 aa15.13■□□□□ 0.01
RBM39-243ENST00000528062 GRIPAP1Q4V328 841 aa15.13■□□□□ 0.01
RBM39-243ENST00000528062 CHST3Q7LGC8 479 aa15.13■□□□□ 0.01
RBM39-243ENST00000528062 ERCC4Q92889 916 aaPredicted RBP15.13■□□□□ 0.01
RBM39-243ENST00000528062 DOCK2Q92608 1830 aa15.13■□□□□ 0.01
RBM39-243ENST00000528062 USP27XA6NNY8 438 aa15.13■□□□□ 0.01
RBM39-243ENST00000528062 SMTNL1A8MU46 457 aa15.13■□□□□ 0.01
RBM39-243ENST00000528062 STX1AQ16623 288 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms