RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 SLC12A7Q9Y666 1083 aa23.6■■□□□ 1.37
SMIM3-201ENST00000526627 ATP6V1AP38606 617 aa23.59■■□□□ 1.37
SMIM3-201ENST00000526627 NCAPHQ15003 741 aa23.59■■□□□ 1.37
SMIM3-201ENST00000526627 CCDC152Q4G0S7 254 aa23.59■■□□□ 1.37
SMIM3-201ENST00000526627 GLIPR1L2Q4G1C9 344 aa23.59■■□□□ 1.37
SMIM3-201ENST00000526627 PARP10Q53GL7 1025 aa23.59■■□□□ 1.37
SMIM3-201ENST00000526627 STAG1Q8WVM7 1258 aa23.59■■□□□ 1.37
SMIM3-201ENST00000526627 LAMB2P55268 1798 aa23.59■■□□□ 1.37
SMIM3-201ENST00000526627 CCDC69A6NI79 296 aa23.59■■□□□ 1.37
SMIM3-201ENST00000526627 CTIFO43310 598 aaKnown RBP23.59■■□□□ 1.37
SMIM3-201ENST00000526627 FMNL1O95466 1100 aaPredicted RBP23.59■■□□□ 1.37
SMIM3-201ENST00000526627 FILIP1Q7Z7B0 1213 aa23.59■■□□□ 1.37
SMIM3-201ENST00000526627 KRT23Q9C075 422 aa23.59■■□□□ 1.37
SMIM3-201ENST00000526627 SLC26A6Q9BXS9 759 aa23.58■■□□□ 1.37
SMIM3-201ENST00000526627 LOC102724428A0A0B4J2F2 783 aa23.58■■□□□ 1.36
SMIM3-201ENST00000526627 TNNT1P13805 278 aa23.58■■□□□ 1.36
SMIM3-201ENST00000526627 IFNAR1P17181 557 aa23.58■■□□□ 1.36
SMIM3-201ENST00000526627 SYKP43405 635 aa23.58■■□□□ 1.36
SMIM3-201ENST00000526627 SIK1P57059 783 aa23.58■■□□□ 1.36
SMIM3-201ENST00000526627 MFSD6Q6ZSS7 791 aa23.58■■□□□ 1.36
SMIM3-201ENST00000526627 ACSBG1Q96GR2 724 aa23.58■■□□□ 1.36
SMIM3-201ENST00000526627 TUBE1Q9UJT0 475 aa23.58■■□□□ 1.36
SMIM3-201ENST00000526627 TAOK2Q9UL54 1235 aa23.58■■□□□ 1.36
SMIM3-201ENST00000526627 SLC4A4Q9Y6R1 1079 aa23.58■■□□□ 1.36
SMIM3-201ENST00000526627 ROBO1Q9Y6N7 1651 aa23.57■■□□□ 1.36
SMIM3-201ENST00000526627 GNAT2P19087 354 aa23.57■■□□□ 1.36
SMIM3-201ENST00000526627 GUCY1A2P33402 732 aa23.57■■□□□ 1.36
SMIM3-201ENST00000526627 SSRP1Q08945 709 aaKnown RBP23.57■■□□□ 1.36
SMIM3-201ENST00000526627 RESP18Q5W5W9 173 aa23.57■■□□□ 1.36
SMIM3-201ENST00000526627 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.57■■□□□ 1.36
SMIM3-201ENST00000526627 USP27XA6NNY8 438 aa23.56■■□□□ 1.36
SMIM3-201ENST00000526627 SKILP12757 684 aa23.56■■□□□ 1.36
SMIM3-201ENST00000526627 IGHMBP2P38935 993 aaKnown RBP23.56■■□□□ 1.36
SMIM3-201ENST00000526627 CHRNDQ07001 517 aa23.56■■□□□ 1.36
SMIM3-201ENST00000526627 CLIC6Q96NY7 704 aa23.56■■□□□ 1.36
SMIM3-201ENST00000526627 OSBPL5Q9H0X9 879 aaPredicted RBP23.56■■□□□ 1.36
SMIM3-201ENST00000526627 NIP7Q9Y221 180 aaKnown RBP eCLIP23.56■■□□□ 1.36
SMIM3-201ENST00000526627 TRIM29Q14134 588 aa23.56■■□□□ 1.36
SMIM3-201ENST00000526627 SPATA31A1Q5TZJ5 1347 aa23.56■■□□□ 1.36
SMIM3-201ENST00000526627 TDO2P48775 406 aa23.55■■□□□ 1.36
SMIM3-201ENST00000526627 GNL2Q13823 731 aaKnown RBP23.55■■□□□ 1.36
SMIM3-201ENST00000526627 ZRSR1Q15695 479 aaKnown RBP23.55■■□□□ 1.36
SMIM3-201ENST00000526627 TPD52L1Q16890 204 aaPredicted RBP23.55■■□□□ 1.36
SMIM3-201ENST00000526627 JMYQ8N9B5 988 aa23.55■■□□□ 1.36
SMIM3-201ENST00000526627 MIGA1Q8NAN2 632 aa23.55■■□□□ 1.36
SMIM3-201ENST00000526627 ZKSCAN3Q9BRR0 538 aa23.55■■□□□ 1.36
SMIM3-201ENST00000526627 DNAJC5Q9H3Z4 198 aa23.55■■□□□ 1.36
SMIM3-201ENST00000526627 AHDC1Q5TGY3 1603 aaPredicted RBP23.55■■□□□ 1.36
SMIM3-201ENST00000526627 CICQ96RK0 1608 aaPredicted RBP23.55■■□□□ 1.36
SMIM3-201ENST00000526627 RRP12Q5JTH9 1297 aaKnown RBP23.55■■□□□ 1.36
SMIM3-201ENST00000526627 MARCH10Q8NA82 808 aaPredicted RBP23.55■■□□□ 1.36
SMIM3-201ENST00000526627 CDCA7Q9BWT1 371 aaPredicted RBP23.55■■□□□ 1.36
SMIM3-201ENST00000526627 XPO4Q9C0E2 1151 aaKnown RBP23.55■■□□□ 1.36
SMIM3-201ENST00000526627 HSD3B7Q9H2F3 369 aa23.55■■□□□ 1.36
SMIM3-201ENST00000526627 DDB1Q16531 1140 aa23.54■■□□□ 1.36
SMIM3-201ENST00000526627 ADGRA1Q86SQ6 560 aa23.54■■□□□ 1.36
SMIM3-201ENST00000526627 NACAP1Q9BZK3 213 aa23.54■■□□□ 1.36
SMIM3-201ENST00000526627 SMTNL1A8MU46 457 aa23.54■■□□□ 1.36
SMIM3-201ENST00000526627 IFNKQ9P0W0 207 aa23.54■■□□□ 1.36
SMIM3-201ENST00000526627 NRAPQ86VF7 1730 aa23.53■■□□□ 1.36
SMIM3-201ENST00000526627 A0A0G2JS52 829 aa23.53■■□□□ 1.36
SMIM3-201ENST00000526627 CUTAO60888 179 aa23.53■■□□□ 1.36
SMIM3-201ENST00000526627 TOB1P50616 345 aaPredicted RBP23.53■■□□□ 1.36
SMIM3-201ENST00000526627 ISM2Q6H9L7 571 aa23.53■■□□□ 1.36
SMIM3-201ENST00000526627 IMPACTQ9P2X3 320 aa23.53■■□□□ 1.36
SMIM3-201ENST00000526627 MMP1P03956 469 aa23.53■■□□□ 1.36
SMIM3-201ENST00000526627 GSDMDP57764 484 aa23.53■■□□□ 1.36
SMIM3-201ENST00000526627 WTAPQ15007 396 aa23.53■■□□□ 1.36
SMIM3-201ENST00000526627 RTN1Q16799 776 aa23.53■■□□□ 1.36
SMIM3-201ENST00000526627 NYAP1Q6ZVC0 841 aa23.53■■□□□ 1.36
SMIM3-201ENST00000526627 NOSTRINQ8IVI9 506 aa23.53■■□□□ 1.36
SMIM3-201ENST00000526627 ANKRD7Q92527 254 aa23.53■■□□□ 1.36
SMIM3-201ENST00000526627 LRP2BPQ9P2M1 347 aa23.53■■□□□ 1.36
SMIM3-201ENST00000526627 BTBD18B2RXH4 712 aa23.52■■□□□ 1.36
SMIM3-201ENST00000526627 IKBKBO14920 756 aa23.52■■□□□ 1.36
SMIM3-201ENST00000526627 MTA3Q9BTC8 594 aa23.52■■□□□ 1.36
SMIM3-201ENST00000526627 KCND1Q9NSA2 647 aa23.52■■□□□ 1.36
SMIM3-201ENST00000526627 ZNF804BA4D1E1 1349 aa23.52■■□□□ 1.36
SMIM3-201ENST00000526627 PNOCQ13519 176 aa23.51■■□□□ 1.35
SMIM3-201ENST00000526627 METTL16Q86W50 562 aaKnown RBP23.51■■□□□ 1.35
SMIM3-201ENST00000526627 STK11IPQ8N1F8 1099 aa23.51■■□□□ 1.35
SMIM3-201ENST00000526627 WASF1Q92558 559 aa23.51■■□□□ 1.35
SMIM3-201ENST00000526627 PPARAQ07869 468 aa23.51■■□□□ 1.35
SMIM3-201ENST00000526627 LONRF3Q496Y0 759 aa23.51■■□□□ 1.35
SMIM3-201ENST00000526627 KCNJ14Q9UNX9 436 aa23.51■■□□□ 1.35
SMIM3-201ENST00000526627 IQSEC3Q9UPP2 1182 aaPredicted RBP23.51■■□□□ 1.35
SMIM3-201ENST00000526627 THRAP3Q9Y2W1 955 aaKnown RBP23.51■■□□□ 1.35
SMIM3-201ENST00000526627 A0A1B0GUL6 1792 aa23.51■■□□□ 1.35
SMIM3-201ENST00000526627 COL1A1P02452 1464 aaPredicted RBP23.51■■□□□ 1.35
SMIM3-201ENST00000526627 WTIPA6NIX2 430 aaPredicted RBP23.5■■□□□ 1.35
SMIM3-201ENST00000526627 SMC2O95347 1197 aa23.5■■□□□ 1.35
SMIM3-201ENST00000526627 CYP7A1P22680 504 aa23.5■■□□□ 1.35
SMIM3-201ENST00000526627 FOXP4Q8IVH2 680 aaPredicted RBP23.5■■□□□ 1.35
SMIM3-201ENST00000526627 DIS3L2Q8IYB7 885 aaKnown RBP23.5■■□□□ 1.35
SMIM3-201ENST00000526627 CRACR2BQ8N4Y2 399 aaPredicted RBP23.5■■□□□ 1.35
SMIM3-201ENST00000526627 TOMM22Q9NS69 142 aa23.5■■□□□ 1.35
SMIM3-201ENST00000526627 PAXBP1Q9Y5B6 917 aa23.5■■□□□ 1.35
SMIM3-201ENST00000526627 SMIM22K7EJ46 135 aa23.5■■□□□ 1.35
SMIM3-201ENST00000526627 ARMCX5Q6P1M9 558 aa23.5■■□□□ 1.35
SMIM3-201ENST00000526627 C3orf67Q6ZVT6 689 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms