RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 RTKN2Q8IZC4 609 aa26.17■■□□□ 1.78
NKX6-3-202ENST00000524115 C8orf76Q96K31 380 aa26.17■■□□□ 1.78
NKX6-3-202ENST00000524115 TNRC6CQ9HCJ0 1690 aaKnown RBP26.17■■□□□ 1.78
NKX6-3-202ENST00000524115 RRP9O43818 475 aaKnown RBP26.16■■□□□ 1.78
NKX6-3-202ENST00000524115 KINO60870 393 aaKnown RBP26.16■■□□□ 1.78
NKX6-3-202ENST00000524115 YEATS4O95619 227 aa26.16■■□□□ 1.78
NKX6-3-202ENST00000524115 FAM160A1Q05DH4 1040 aa26.16■■□□□ 1.78
NKX6-3-202ENST00000524115 CKAP2LQ8IYA6 745 aa26.16■■□□□ 1.78
NKX6-3-202ENST00000524115 TMEM87BQ96K49 555 aa26.16■■□□□ 1.78
NKX6-3-202ENST00000524115 CBX8Q9HC52 389 aa26.16■■□□□ 1.78
NKX6-3-202ENST00000524115 NCOA5Q9HCD5 579 aaKnown RBP26.16■■□□□ 1.78
NKX6-3-202ENST00000524115 R3HCC1Q9Y3T6 440 aaKnown RBP26.16■■□□□ 1.78
NKX6-3-202ENST00000524115 ARAP2Q8WZ64 1704 aa26.16■■□□□ 1.78
NKX6-3-202ENST00000524115 GOLGA8BA8MQT2 603 aa26.15■■□□□ 1.78
NKX6-3-202ENST00000524115 FGFR2P21802 821 aa26.15■■□□□ 1.78
NKX6-3-202ENST00000524115 PLCB2Q00722 1185 aa26.15■■□□□ 1.78
NKX6-3-202ENST00000524115 CCDC102BQ68D86 513 aa26.15■■□□□ 1.78
NKX6-3-202ENST00000524115 KCNG4Q8TDN1 519 aa26.15■■□□□ 1.78
NKX6-3-202ENST00000524115 RTL9Q8NET4 1388 aa26.15■■□□□ 1.78
NKX6-3-202ENST00000524115 GLTPD2A6NH11 291 aa26.15■■□□□ 1.78
NKX6-3-202ENST00000524115 STX1AQ16623 288 aa26.15■■□□□ 1.78
NKX6-3-202ENST00000524115 USP28Q96RU2 1077 aa26.15■■□□□ 1.78
NKX6-3-202ENST00000524115 SPTLC3Q9NUV7 552 aa26.15■■□□□ 1.78
NKX6-3-202ENST00000524115 FDPSP14324 419 aaKnown RBP26.14■■□□□ 1.78
NKX6-3-202ENST00000524115 ZNF165P49910 485 aa26.14■■□□□ 1.78
NKX6-3-202ENST00000524115 HAND2P61296 217 aa26.14■■□□□ 1.78
NKX6-3-202ENST00000524115 NOLC1Q14978 699 aaKnown RBP eCLIP26.14■■□□□ 1.78
NKX6-3-202ENST00000524115 DDX60Q8IY21 1712 aaKnown RBP26.14■■□□□ 1.78
NKX6-3-202ENST00000524115 FBXO18Q8NFZ0 1043 aa26.14■■□□□ 1.78
NKX6-3-202ENST00000524115 RRAGCQ9HB90 399 aa26.14■■□□□ 1.78
NKX6-3-202ENST00000524115 ORC3Q9UBD5 711 aaPredicted RBP26.14■■□□□ 1.78
NKX6-3-202ENST00000524115 ANGEL1Q9UNK9 670 aaKnown RBP26.14■■□□□ 1.78
NKX6-3-202ENST00000524115 AKAP11Q9UKA4 1901 aa26.14■■□□□ 1.77
NKX6-3-202ENST00000524115 MAP3K12Q12852 859 aa26.13■■□□□ 1.77
NKX6-3-202ENST00000524115 CC2D2BQ6DHV5 1058 aa26.13■■□□□ 1.77
NKX6-3-202ENST00000524115 ADALQ6DHV7 355 aa26.13■■□□□ 1.77
NKX6-3-202ENST00000524115 CHST3Q7LGC8 479 aa26.13■■□□□ 1.77
NKX6-3-202ENST00000524115 PRIMPOLQ96LW4 560 aa26.13■■□□□ 1.77
NKX6-3-202ENST00000524115 POLR3EQ9NVU0 708 aa26.13■■□□□ 1.77
NKX6-3-202ENST00000524115 PDE6AP16499 860 aa26.12■■□□□ 1.77
NKX6-3-202ENST00000524115 CDC25BP30305 580 aa26.12■■□□□ 1.77
NKX6-3-202ENST00000524115 ZNF277Q9NRM2 450 aaPredicted RBP26.12■■□□□ 1.77
NKX6-3-202ENST00000524115 SBF1O95248 1867 aa26.12■■□□□ 1.77
NKX6-3-202ENST00000524115 PPEF1O14829 653 aaPredicted RBP26.12■■□□□ 1.77
NKX6-3-202ENST00000524115 GNAT2P19087 354 aa26.12■■□□□ 1.77
NKX6-3-202ENST00000524115 ME1P48163 572 aa26.12■■□□□ 1.77
NKX6-3-202ENST00000524115 ANTXR2P58335 489 aa26.12■■□□□ 1.77
NKX6-3-202ENST00000524115 MRPS27Q92552 414 aaKnown RBP26.12■■□□□ 1.77
NKX6-3-202ENST00000524115 PIH1D3Q9NQM4 214 aaKnown RBP26.12■■□□□ 1.77
NKX6-3-202ENST00000524115 ANO10Q9NW15 660 aa26.12■■□□□ 1.77
NKX6-3-202ENST00000524115 HPS5Q9UPZ3 1129 aa26.12■■□□□ 1.77
NKX6-3-202ENST00000524115 ZNF532Q9HCE3 1301 aa26.11■■□□□ 1.77
NKX6-3-202ENST00000524115 GOLGA6L19H0YKK7 550 aa26.11■■□□□ 1.77
NKX6-3-202ENST00000524115 IDH1O75874 414 aaKnown RBP26.11■■□□□ 1.77
NKX6-3-202ENST00000524115 TOMM70O94826 608 aa26.11■■□□□ 1.77
NKX6-3-202ENST00000524115 DPY19L2Q6NUT2 758 aa26.11■■□□□ 1.77
NKX6-3-202ENST00000524115 AIDAQ96BJ3 306 aa26.11■■□□□ 1.77
NKX6-3-202ENST00000524115 MPHOSPH8Q99549 860 aa26.11■■□□□ 1.77
NKX6-3-202ENST00000524115 MTA3Q9BTC8 594 aa26.11■■□□□ 1.77
NKX6-3-202ENST00000524115 CNNM2Q9H8M5 875 aa26.11■■□□□ 1.77
NKX6-3-202ENST00000524115 CCDC152Q4G0S7 254 aa26.1■■□□□ 1.77
NKX6-3-202ENST00000524115 ENGASEQ8NFI3 743 aa26.1■■□□□ 1.77
NKX6-3-202ENST00000524115 NAT10Q9H0A0 1025 aaKnown RBP26.1■■□□□ 1.77
NKX6-3-202ENST00000524115 PATL2C9JE40 543 aaKnown RBP26.09■■□□□ 1.77
NKX6-3-202ENST00000524115 STK38Q15208 465 aa26.09■■□□□ 1.77
NKX6-3-202ENST00000524115 SF3A1Q15459 793 aaKnown RBP26.09■■□□□ 1.77
NKX6-3-202ENST00000524115 SARM1Q6SZW1 724 aa26.09■■□□□ 1.77
NKX6-3-202ENST00000524115 SYNE3Q6ZMZ3 975 aa26.09■■□□□ 1.77
NKX6-3-202ENST00000524115 SLC51AQ86UW1 340 aa26.09■■□□□ 1.77
NKX6-3-202ENST00000524115 LUZP1Q86V48 1076 aa26.09■■□□□ 1.77
NKX6-3-202ENST00000524115 SPATA5Q8NB90 893 aa26.09■■□□□ 1.77
NKX6-3-202ENST00000524115 FER1L6Q2WGJ9 1857 aa26.09■■□□□ 1.77
NKX6-3-202ENST00000524115 TCRBV5S4A2TA0A5A2 114 aa26.09■■□□□ 1.77
NKX6-3-202ENST00000524115 SH2B2O14492 632 aaPredicted RBP26.09■■□□□ 1.77
NKX6-3-202ENST00000524115 DYNC1I1O14576 645 aa26.09■■□□□ 1.77
NKX6-3-202ENST00000524115 APPP05067 770 aa26.09■■□□□ 1.77
NKX6-3-202ENST00000524115 PHKA1P46020 1223 aa26.09■■□□□ 1.77
NKX6-3-202ENST00000524115 PI16Q6UXB8 463 aa26.09■■□□□ 1.77
NKX6-3-202ENST00000524115 PLA2G4DQ86XP0 818 aa26.09■■□□□ 1.77
NKX6-3-202ENST00000524115 FSIP1Q8NA03 581 aa26.09■■□□□ 1.77
NKX6-3-202ENST00000524115 STRBPQ96SI9 672 aaKnown RBP26.09■■□□□ 1.77
NKX6-3-202ENST00000524115 PSMD1Q99460 953 aa26.09■■□□□ 1.77
NKX6-3-202ENST00000524115 AP5Z1O43299 807 aa26.08■■□□□ 1.77
NKX6-3-202ENST00000524115 BBOX1O75936 387 aa26.08■■□□□ 1.77
NKX6-3-202ENST00000524115 IGHMBP2P38935 993 aaKnown RBP26.08■■□□□ 1.77
NKX6-3-202ENST00000524115 ZNF75DP51815 510 aa26.08■■□□□ 1.77
NKX6-3-202ENST00000524115 CEBPZQ03701 1054 aaKnown RBP26.08■■□□□ 1.77
NKX6-3-202ENST00000524115 GRIPAP1Q4V328 841 aa26.08■■□□□ 1.77
NKX6-3-202ENST00000524115 DNTTIP2Q5QJE6 756 aaKnown RBP26.08■■□□□ 1.77
NKX6-3-202ENST00000524115 LINC00301Q8NCQ3 95 aa26.08■■□□□ 1.77
NKX6-3-202ENST00000524115 MAP7D2Q96T17 732 aa26.08■■□□□ 1.77
NKX6-3-202ENST00000524115 TTC12Q9H892 705 aaPredicted RBP26.08■■□□□ 1.77
NKX6-3-202ENST00000524115 SNED1Q8TER0 1413 aa26.08■■□□□ 1.77
NKX6-3-202ENST00000524115 METAP2P50579 478 aaKnown RBP eCLIP26.07■■□□□ 1.76
NKX6-3-202ENST00000524115 SNW1Q13573 536 aaKnown RBP26.07■■□□□ 1.76
NKX6-3-202ENST00000524115 NACAP1Q9BZK3 213 aa26.07■■□□□ 1.76
NKX6-3-202ENST00000524115 TRIM5Q9C035 493 aa26.07■■□□□ 1.76
NKX6-3-202ENST00000524115 KRT23Q9C075 422 aa26.07■■□□□ 1.76
NKX6-3-202ENST00000524115 ATP6V0A2Q9Y487 856 aa26.07■■□□□ 1.76
NKX6-3-202ENST00000524115 IARSP41252 1262 aaKnown RBP26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms