RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 UVSSAQ2YD98 709 aa9.16□□□□□ -0.94
PABPC1-216ENST00000520868 ANKLE2Q86XL3 938 aa9.16□□□□□ -0.94
PABPC1-216ENST00000520868 THEMISQ8N1K5 641 aaPredicted RBP9.16□□□□□ -0.94
PABPC1-216ENST00000520868 CCDC74AQ96AQ1 378 aa9.16□□□□□ -0.94
PABPC1-216ENST00000520868 CSRNP1Q96S65 589 aa9.16□□□□□ -0.94
PABPC1-216ENST00000520868 TCF12Q99081 682 aa9.16□□□□□ -0.94
PABPC1-216ENST00000520868 EHD4Q9H223 541 aa9.16□□□□□ -0.94
PABPC1-216ENST00000520868 CLEC4MQ9H2X3 399 aaPredicted RBP9.16□□□□□ -0.94
PABPC1-216ENST00000520868 NPHS2Q9NP85 383 aa9.16□□□□□ -0.94
PABPC1-216ENST00000520868 IVNS1ABPQ9Y6Y0 642 aa9.16□□□□□ -0.94
PABPC1-216ENST00000520868 EHBP1L1Q8N3D4 1523 aa9.15□□□□□ -0.94
PABPC1-216ENST00000520868 CEP162Q5TB80 1403 aa9.15□□□□□ -0.94
PABPC1-216ENST00000520868 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.15□□□□□ -0.94
PABPC1-216ENST00000520868 TOM1O60784 492 aa9.15□□□□□ -0.94
PABPC1-216ENST00000520868 MAPK1P28482 360 aa9.15□□□□□ -0.94
PABPC1-216ENST00000520868 ANKRD34AQ69YU3 496 aa9.15□□□□□ -0.94
PABPC1-216ENST00000520868 TMC7Q7Z402 723 aa9.15□□□□□ -0.94
PABPC1-216ENST00000520868 RUSC1Q9BVN2 902 aa9.15□□□□□ -0.94
PABPC1-216ENST00000520868 ADGBQ8N7X0 1667 aa9.15□□□□□ -0.94
PABPC1-216ENST00000520868 ZNF142P52746 1687 aaPredicted RBP9.14□□□□□ -0.95
PABPC1-216ENST00000520868 DNMT1P26358 1616 aaKnown RBP9.14□□□□□ -0.95
PABPC1-216ENST00000520868 PCDH1Q08174 1060 aa9.14□□□□□ -0.95
PABPC1-216ENST00000520868 SLC51AQ86UW1 340 aa9.14□□□□□ -0.95
PABPC1-216ENST00000520868 DDX54Q8TDD1 881 aaKnown RBP9.14□□□□□ -0.95
PABPC1-216ENST00000520868 NCOA2Q15596 1464 aa9.14□□□□□ -0.95
PABPC1-216ENST00000520868 CCDC141Q6ZP82 1450 aa9.14□□□□□ -0.95
PABPC1-216ENST00000520868 MIA2Q96PC5 1412 aa9.14□□□□□ -0.95
PABPC1-216ENST00000520868 MEGF11A6BM72 1044 aa9.13□□□□□ -0.95
PABPC1-216ENST00000520868 DHX15O43143 795 aaKnown RBP9.13□□□□□ -0.95
PABPC1-216ENST00000520868 FSTP19883 344 aa9.13□□□□□ -0.95
PABPC1-216ENST00000520868 GRIA4P48058 902 aa9.13□□□□□ -0.95
PABPC1-216ENST00000520868 USP26Q9BXU7 913 aa9.13□□□□□ -0.95
PABPC1-216ENST00000520868 KRTAP4-8Q9BYQ9 185 aa9.13□□□□□ -0.95
PABPC1-216ENST00000520868 TRAK1Q9UPV9 953 aa9.13□□□□□ -0.95
PABPC1-216ENST00000520868 CAMSAP2Q08AD1 1489 aa9.13□□□□□ -0.95
PABPC1-216ENST00000520868 SART1O43290 800 aaKnown RBP9.12□□□□□ -0.95
PABPC1-216ENST00000520868 GADD45BO75293 160 aaPredicted RBP9.12□□□□□ -0.95
PABPC1-216ENST00000520868 GSTM4Q03013 218 aa9.12□□□□□ -0.95
PABPC1-216ENST00000520868 SPRED3Q2MJR0 410 aa9.12□□□□□ -0.95
PABPC1-216ENST00000520868 FDX2Q6P4F2 183 aa9.12□□□□□ -0.95
PABPC1-216ENST00000520868 UTP4Q969X6 686 aaKnown RBP9.12□□□□□ -0.95
PABPC1-216ENST00000520868 FAM46AQ96IP4 442 aaKnown RBP9.12□□□□□ -0.95
PABPC1-216ENST00000520868 RAXQ9Y2V3 346 aa9.12□□□□□ -0.95
PABPC1-216ENST00000520868 PZPP20742 1482 aa9.12□□□□□ -0.95
PABPC1-216ENST00000520868 SHANK2Q9UPX8 1470 aa9.12□□□□□ -0.95
PABPC1-216ENST00000520868 LOC105371045A0A1W2PR82 267 aa9.11□□□□□ -0.95
PABPC1-216ENST00000520868 DLGAP3O95886 979 aa9.11□□□□□ -0.95
PABPC1-216ENST00000520868 ITPKAP23677 461 aa9.11□□□□□ -0.95
PABPC1-216ENST00000520868 PREPP48147 710 aa9.11□□□□□ -0.95
PABPC1-216ENST00000520868 PLCB3Q01970 1234 aa9.11□□□□□ -0.95
PABPC1-216ENST00000520868 PTPN12Q05209 780 aaKnown RBP9.11□□□□□ -0.95
PABPC1-216ENST00000520868 ARTNQ5T4W7 220 aa9.11□□□□□ -0.95
PABPC1-216ENST00000520868 PRPF40BQ6NWY9 871 aaKnown RBP9.11□□□□□ -0.95
PABPC1-216ENST00000520868 ZSCAN29Q8IWY8 852 aaPredicted RBP9.11□□□□□ -0.95
PABPC1-216ENST00000520868 ZFYVE1Q9HBF4 777 aa9.11□□□□□ -0.95
PABPC1-216ENST00000520868 NLRP2Q9NX02 1062 aa9.11□□□□□ -0.95
PABPC1-216ENST00000520868 KDM5DQ9BY66 1539 aa9.1□□□□□ -0.95
PABPC1-216ENST00000520868 LOC100289279A0A1B0GTE1 492 aa9.1□□□□□ -0.95
PABPC1-216ENST00000520868 GSC2O15499 205 aa9.1□□□□□ -0.95
PABPC1-216ENST00000520868 HP1BP3Q5SSJ5 553 aaPredicted RBP9.1□□□□□ -0.95
PABPC1-216ENST00000520868 NUTM2GQ5VZR2 741 aa9.1□□□□□ -0.95
PABPC1-216ENST00000520868 CYP4F12Q9HCS2 524 aa9.1□□□□□ -0.95
PABPC1-216ENST00000520868 ZFP64Q9NPA5 681 aa9.1□□□□□ -0.95
PABPC1-216ENST00000520868 PPP4R2Q9NY27 417 aa9.1□□□□□ -0.95
PABPC1-216ENST00000520868 NPHP4O75161 1426 aaPredicted RBP9.1□□□□□ -0.95
PABPC1-216ENST00000520868 NEURL4Q96JN8 1562 aa9.09□□□□□ -0.95
PABPC1-216ENST00000520868 UGGT1Q9NYU2 1555 aa9.09□□□□□ -0.95
PABPC1-216ENST00000520868 TREHO43280 583 aa9.09□□□□□ -0.95
PABPC1-216ENST00000520868 HYAL3O43820 417 aaPredicted RBP9.09□□□□□ -0.95
PABPC1-216ENST00000520868 CYP11A1P05108 521 aa9.09□□□□□ -0.95
PABPC1-216ENST00000520868 DSC3Q14574 896 aa9.09□□□□□ -0.95
PABPC1-216ENST00000520868 MYRFLQ96LU7 910 aa9.09□□□□□ -0.95
PABPC1-216ENST00000520868 ZNF576Q9H609 170 aa9.09□□□□□ -0.95
PABPC1-216ENST00000520868 SUGCTQ9HAC7 445 aa9.09□□□□□ -0.95
PABPC1-216ENST00000520868 STOML1Q9UBI4 398 aa9.09□□□□□ -0.95
PABPC1-216ENST00000520868 HIF3AQ9Y2N7 669 aa9.09□□□□□ -0.95
PABPC1-216ENST00000520868 CPS1P31327 1500 aa9.09□□□□□ -0.95
PABPC1-216ENST00000520868 FAM135AQ9P2D6 1515 aa9.09□□□□□ -0.95
PABPC1-216ENST00000520868 NLRP1Q9C000 1473 aa9.08□□□□□ -0.96
PABPC1-216ENST00000520868 B3GALT4O96024 378 aa9.08□□□□□ -0.96
PABPC1-216ENST00000520868 ZNF423Q2M1K9 1284 aa9.08□□□□□ -0.96
PABPC1-216ENST00000520868 EXOSC6Q5RKV6 272 aaKnown RBP9.08□□□□□ -0.96
PABPC1-216ENST00000520868 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.08□□□□□ -0.96
PABPC1-216ENST00000520868 TMPRSS13Q9BYE2 586 aa9.08□□□□□ -0.96
PABPC1-216ENST00000520868 ABCB6Q9NP58 842 aa9.08□□□□□ -0.96
PABPC1-216ENST00000520868 TMEM238LA0A1B0GVL6 79 aa9.07□□□□□ -0.96
PABPC1-216ENST00000520868 HMX2A2RU54 273 aa9.07□□□□□ -0.96
PABPC1-216ENST00000520868 LRP8Q14114 963 aa9.07□□□□□ -0.96
PABPC1-216ENST00000520868 RPS26P11Q5JNZ5 115 aaPredicted RBP9.07□□□□□ -0.96
PABPC1-216ENST00000520868 TRIM42Q8IWZ5 723 aa9.07□□□□□ -0.96
PABPC1-216ENST00000520868 SMG8Q8ND04 991 aaKnown RBP9.07□□□□□ -0.96
PABPC1-216ENST00000520868 EPS8L3Q8TE67 593 aaKnown RBP9.07□□□□□ -0.96
PABPC1-216ENST00000520868 C7orf69Q9H7B7 122 aa9.07□□□□□ -0.96
PABPC1-216ENST00000520868 RNF112Q9ULX5 631 aa9.07□□□□□ -0.96
PABPC1-216ENST00000520868 PNMA6FA0A0J9YX94 578 aa9.06□□□□□ -0.96
PABPC1-216ENST00000520868 GAS2O43903 313 aaKnown RBP9.06□□□□□ -0.96
PABPC1-216ENST00000520868 CTSBP07858 339 aa9.06□□□□□ -0.96
PABPC1-216ENST00000520868 GRM2Q14416 872 aa9.06□□□□□ -0.96
PABPC1-216ENST00000520868 ENOX2Q16206 610 aaKnown RBP9.06□□□□□ -0.96
PABPC1-216ENST00000520868 FAM20CQ8IXL6 584 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms