RNA–Protein interactions for RNA: ENST00000520828.5

PTK2-223, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-223	ENST00000520828	DDX10	Q13206	875 aa	Known RBP	10.2	□□□□□ -0.78
PTK2-223	ENST00000520828	CAVIN4	Q5BKX8	364 aa		10.2	□□□□□ -0.78
PTK2-223	ENST00000520828	EPHA10	Q5JZY3	1008 aa		10.2	□□□□□ -0.78
PTK2-223	ENST00000520828	NOL9	Q5SY16	702 aa	Known RBP	10.2	□□□□□ -0.78
PTK2-223	ENST00000520828	FBXO33	Q7Z6M2	555 aa		10.2	□□□□□ -0.78
PTK2-223	ENST00000520828	RPTOR	Q8N122	1335 aa		10.2	□□□□□ -0.78
PTK2-223	ENST00000520828	SMCR8	Q8TEV9	937 aa	Predicted RBP	10.2	□□□□□ -0.78
PTK2-223	ENST00000520828	FAM151A	Q8WW52	585 aa		10.2	□□□□□ -0.78
PTK2-223	ENST00000520828	SUGT1	Q9Y2Z0	365 aa		10.2	□□□□□ -0.78
PTK2-223	ENST00000520828	UNC80	Q8N2C7	3258 aa		10.2	□□□□□ -0.78
PTK2-223	ENST00000520828	MROH5	Q6ZUA9	1318 aa		10.19	□□□□□ -0.78
PTK2-223	ENST00000520828		A0A0G2JLL6	359 aa	Predicted RBP	10.19	□□□□□ -0.78
PTK2-223	ENST00000520828	HHIPL2	Q6UWX4	724 aa		10.19	□□□□□ -0.78
PTK2-223	ENST00000520828	GADL1	Q6ZQY3	521 aa		10.19	□□□□□ -0.78
PTK2-223	ENST00000520828	PRRT2	Q7Z6L0	340 aa	Predicted RBP	10.19	□□□□□ -0.78
PTK2-223	ENST00000520828	SLC45A1	Q9Y2W3	748 aa		10.19	□□□□□ -0.78
PTK2-223	ENST00000520828	ZHX2	Q9Y6X8	837 aa		10.19	□□□□□ -0.78
PTK2-223	ENST00000520828	GRM8	O00222	908 aa		10.18	□□□□□ -0.78
PTK2-223	ENST00000520828	TCP10	Q12799	353 aa		10.18	□□□□□ -0.78
PTK2-223	ENST00000520828	PUS3	Q9BZE2	481 aa	Known RBP	10.18	□□□□□ -0.78
PTK2-223	ENST00000520828	C11orf49	Q9H6J7	331 aa		10.18	□□□□□ -0.78
PTK2-223	ENST00000520828	PICK1	Q9NRD5	415 aa		10.18	□□□□□ -0.78
PTK2-223	ENST00000520828	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.18	□□□□□ -0.78
PTK2-223	ENST00000520828	MGAM	O43451	1857 aa		10.17	□□□□□ -0.78
PTK2-223	ENST00000520828	HMGCR	P04035	888 aa		10.17	□□□□□ -0.78
PTK2-223	ENST00000520828	BEND3	Q5T5X7	828 aa		10.17	□□□□□ -0.78
PTK2-223	ENST00000520828	SCYL3	Q8IZE3	742 aa		10.17	□□□□□ -0.78
PTK2-223	ENST00000520828	HMX1	Q9NP08	348 aa	Predicted RBP	10.17	□□□□□ -0.78
PTK2-223	ENST00000520828	ALPK3	Q96L96	1907 aa		10.16	□□□□□ -0.78
PTK2-223	ENST00000520828		F6X3S4	739 aa		10.16	□□□□□ -0.78
PTK2-223	ENST00000520828	METTL24	Q5JXM2	366 aa		10.16	□□□□□ -0.78
PTK2-223	ENST00000520828	FAM109B	Q6ICB4	259 aa	Predicted RBP	10.16	□□□□□ -0.78
PTK2-223	ENST00000520828	CDC42EP5	Q6NZY7	148 aa		10.16	□□□□□ -0.78
PTK2-223	ENST00000520828	ANKRD13C	Q8N6S4	541 aa		10.16	□□□□□ -0.78
PTK2-223	ENST00000520828	GUCD1	Q96NT3	240 aa		10.16	□□□□□ -0.78
PTK2-223	ENST00000520828	PRDM6	Q9NQX0	595 aa		10.16	□□□□□ -0.78
PTK2-223	ENST00000520828	PNMA3	Q9UL41	463 aa		10.16	□□□□□ -0.78
PTK2-223	ENST00000520828	AFG3L2	Q9Y4W6	797 aa		10.16	□□□□□ -0.78
PTK2-223	ENST00000520828	POTEB2	H3BUK9	544 aa		10.15	□□□□□ -0.78
PTK2-223	ENST00000520828	PTPRA	P18433	802 aa		10.15	□□□□□ -0.78
PTK2-223	ENST00000520828	NFIA	Q12857	509 aa		10.15	□□□□□ -0.78
PTK2-223	ENST00000520828	FAM110C	Q1W6H9	321 aa		10.15	□□□□□ -0.78
PTK2-223	ENST00000520828	WDR66	Q8TBY9	1149 aa		10.15	□□□□□ -0.78
PTK2-223	ENST00000520828	FAM198A	Q9UFP1	575 aa		10.15	□□□□□ -0.78
PTK2-223	ENST00000520828	OGDHL	Q9ULD0	1010 aa		10.15	□□□□□ -0.78
PTK2-223	ENST00000520828	DAGLA	Q9Y4D2	1042 aa		10.15	□□□□□ -0.78
PTK2-223	ENST00000520828	TRIM75P	A6NK02	468 aa		10.14	□□□□□ -0.79
PTK2-223	ENST00000520828	PHF20L1	A8MW92	1017 aa		10.14	□□□□□ -0.79
PTK2-223	ENST00000520828	PDE8B	O95263	885 aa		10.14	□□□□□ -0.79
PTK2-223	ENST00000520828	MDM2	Q00987	491 aa	Predicted RBP	10.14	□□□□□ -0.79
PTK2-223	ENST00000520828	FAM161B	Q96MY7	647 aa		10.14	□□□□□ -0.79
PTK2-223	ENST00000520828	USP40	Q9NVE5	1235 aa		10.14	□□□□□ -0.79
PTK2-223	ENST00000520828	AGTPBP1	Q9UPW5	1226 aa		10.14	□□□□□ -0.79
PTK2-223	ENST00000520828	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.14	□□□□□ -0.79
PTK2-223	ENST00000520828	LRRFIP2	Q9Y608	721 aa	Known RBP	10.14	□□□□□ -0.79
PTK2-223	ENST00000520828	DDX60L	Q5H9U9	1706 aa	Known RBP	10.13	□□□□□ -0.79
PTK2-223	ENST00000520828	KIF16B	Q96L93	1317 aa		10.13	□□□□□ -0.79
PTK2-223	ENST00000520828	ALDH1L1	O75891	902 aa		10.13	□□□□□ -0.79
PTK2-223	ENST00000520828	GABBR2	O75899	941 aa		10.13	□□□□□ -0.79
PTK2-223	ENST00000520828	IFIT1	P09914	478 aa	Known RBP	10.13	□□□□□ -0.79
PTK2-223	ENST00000520828	GCLC	P48506	637 aa	Predicted RBP	10.13	□□□□□ -0.79
PTK2-223	ENST00000520828	TRIM32	Q13049	653 aa		10.13	□□□□□ -0.79
PTK2-223	ENST00000520828	DIXDC1	Q155Q3	683 aa		10.13	□□□□□ -0.79
PTK2-223	ENST00000520828	LRRC24	Q50LG9	513 aa		10.13	□□□□□ -0.79
PTK2-223	ENST00000520828	ZNF697	Q5TEC3	545 aa		10.13	□□□□□ -0.79
PTK2-223	ENST00000520828	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.13	□□□□□ -0.79
PTK2-223	ENST00000520828	ZFPM1	Q8IX07	1006 aa		10.13	□□□□□ -0.79
PTK2-223	ENST00000520828	ATRNL1	Q5VV63	1379 aa		10.13	□□□□□ -0.79
PTK2-223	ENST00000520828	PFAS	O15067	1338 aa		10.12	□□□□□ -0.79
PTK2-223	ENST00000520828	SPDYE4	A6NLX3	237 aa		10.12	□□□□□ -0.79
PTK2-223	ENST00000520828	CTNND1	O60716	968 aa	Known RBP	10.12	□□□□□ -0.79
PTK2-223	ENST00000520828	RGS3	P49796	1198 aa		10.12	□□□□□ -0.79
PTK2-223	ENST00000520828	PABPC4	Q13310	644 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
PTK2-223	ENST00000520828	PUM3	Q15397	648 aa	Known RBP	10.12	□□□□□ -0.79
PTK2-223	ENST00000520828	CCDC27	Q2M243	656 aa		10.12	□□□□□ -0.79
PTK2-223	ENST00000520828	TREML2	Q5T2D2	321 aa		10.12	□□□□□ -0.79
PTK2-223	ENST00000520828	VGLL2	Q8N8G2	317 aa		10.12	□□□□□ -0.79
PTK2-223	ENST00000520828	SUCLG2	Q96I99	432 aa		10.12	□□□□□ -0.79
PTK2-223	ENST00000520828	LBHD1	Q9BQE6	289 aa	Predicted RBP	10.12	□□□□□ -0.79
PTK2-223	ENST00000520828	SRCIN1	Q9C0H9	1055 aa		10.12	□□□□□ -0.79
PTK2-223	ENST00000520828	GJD2	Q9UKL4	321 aa		10.12	□□□□□ -0.79
PTK2-223	ENST00000520828	IL16	Q14005	1332 aa		10.11	□□□□□ -0.79
PTK2-223	ENST00000520828	ENTPD3	O75355	529 aa		10.11	□□□□□ -0.79
PTK2-223	ENST00000520828	VAMP4	O75379	141 aa		10.11	□□□□□ -0.79
PTK2-223	ENST00000520828	LDHB	P07195	334 aa	Known RBP	10.11	□□□□□ -0.79
PTK2-223	ENST00000520828	COL6A1	P12109	1028 aa		10.11	□□□□□ -0.79
PTK2-223	ENST00000520828	LRRC26	Q2I0M4	334 aa		10.11	□□□□□ -0.79
PTK2-223	ENST00000520828	MAP3K21	Q5TCX8	1036 aa		10.11	□□□□□ -0.79
PTK2-223	ENST00000520828	SLC4A10	Q6U841	1118 aa		10.11	□□□□□ -0.79
PTK2-223	ENST00000520828	WWC1	Q8IX03	1113 aa		10.11	□□□□□ -0.79
PTK2-223	ENST00000520828	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.11	□□□□□ -0.79
PTK2-223	ENST00000520828	MAFA	Q8NHW3	353 aa	Predicted RBP	10.11	□□□□□ -0.79
PTK2-223	ENST00000520828	TRIB2	Q92519	343 aa		10.11	□□□□□ -0.79
PTK2-223	ENST00000520828	SYMPK	Q92797	1274 aa	Known RBP	10.11	□□□□□ -0.79
PTK2-223	ENST00000520828	KAZALD1	Q96I82	304 aa		10.11	□□□□□ -0.79
PTK2-223	ENST00000520828	CDX2	Q99626	313 aa	Predicted RBP	10.11	□□□□□ -0.79
PTK2-223	ENST00000520828	FANCI	Q9NVI1	1328 aa		10.1	□□□□□ -0.79
PTK2-223	ENST00000520828	AK9	Q5TCS8	1911 aa		10.1	□□□□□ -0.79
PTK2-223	ENST00000520828	SLC5A1	P13866	664 aa		10.1	□□□□□ -0.79
PTK2-223	ENST00000520828	CYP2B6	P20813	491 aa		10.1	□□□□□ -0.79

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