RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 KIAA1211LQ6NV74 962 aa4.84□□□□□ -1.63
SREK1-208ENST00000520580 RNF180Q86T96 592 aa4.84□□□□□ -1.63
SREK1-208ENST00000520580 SYNPOQ8N3V7 929 aa4.84□□□□□ -1.63
SREK1-208ENST00000520580 PBX4Q9BYU1 374 aa4.84□□□□□ -1.63
SREK1-208ENST00000520580 HCSTQ9UBK5 93 aa4.84□□□□□ -1.63
SREK1-208ENST00000520580 MCM8Q9UJA3 840 aa4.84□□□□□ -1.63
SREK1-208ENST00000520580 LTBP3Q9NS15 1303 aa4.84□□□□□ -1.63
SREK1-208ENST00000520580 WASHC2CQ9Y4E1 1318 aa4.84□□□□□ -1.63
SREK1-208ENST00000520580 EIF2AK2P19525 551 aaKnown RBP4.84□□□□□ -1.64
SREK1-208ENST00000520580 PCDH1Q08174 1060 aa4.84□□□□□ -1.64
SREK1-208ENST00000520580 ZBTB38Q8NAP3 1195 aaPredicted RBP4.84□□□□□ -1.64
SREK1-208ENST00000520580 CLUHP3Q96NS8 147 aa4.84□□□□□ -1.64
SREK1-208ENST00000520580 MPHOSPH6Q99547 160 aaKnown RBP4.84□□□□□ -1.64
SREK1-208ENST00000520580 TM9SF2Q99805 663 aa4.84□□□□□ -1.64
SREK1-208ENST00000520580 TARS2Q9BW92 718 aaKnown RBP4.84□□□□□ -1.64
SREK1-208ENST00000520580 LACRTQ9GZZ8 138 aa4.84□□□□□ -1.64
SREK1-208ENST00000520580 TOR4AQ9NXH8 423 aa4.84□□□□□ -1.64
SREK1-208ENST00000520580 LOC102724428A0A0B4J2F2 783 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 SHTN1A0MZ66 631 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 HTR3BO95264 441 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 SCGB1D2O95969 90 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 CDC25BP30305 580 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 GNALP38405 381 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 SIK1P57059 783 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 NFE2Q16621 373 aaPredicted RBP4.83□□□□□ -1.64
SREK1-208ENST00000520580 RPS26P11Q5JNZ5 115 aaPredicted RBP4.83□□□□□ -1.64
SREK1-208ENST00000520580 DIEXFQ68CQ4 756 aaKnown RBP4.83□□□□□ -1.64
SREK1-208ENST00000520580 MRPL14Q6P1L8 145 aaKnown RBP4.83□□□□□ -1.64
SREK1-208ENST00000520580 STRA8Q7Z7C7 330 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 SMC5Q8IY18 1101 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 BSNDQ8WZ55 320 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 EXOC2Q96KP1 924 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 DYRK1BQ9Y463 629 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 TSPAN6O43657 245 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 SUSD5O60279 629 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 GDF9O60383 454 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 DNAJA2O60884 412 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 B3GALT4O96024 378 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 FAM157BP0CG42 384 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 SOX5P35711 763 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 CCNFP41002 786 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 RAB27AP51159 221 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 LRRC14Q15048 493 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 FAM209AQ5JX71 171 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 OVOS1Q6IE37 1185 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 UNC5AQ6ZN44 842 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 C14orf80Q86SX3 495 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 C19orf47Q8N9M1 422 aaKnown RBP4.83□□□□□ -1.64
SREK1-208ENST00000520580 TMEM40Q8WWA1 233 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 ACSBG1Q96GR2 724 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 ABHD17AQ96GS6 310 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 CDC6Q99741 560 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 LGR4Q9BXB1 951 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 NCOA5Q9HCD5 579 aaKnown RBP4.83□□□□□ -1.64
SREK1-208ENST00000520580 MARK1Q9P0L2 795 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 KLHL3Q9UH77 587 aa4.83□□□□□ -1.64
SREK1-208ENST00000520580 CREB3O43889 395 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 ATE1O95260 518 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 GHRHP01286 108 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 ARNTP27540 789 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 TNP2Q05952 138 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 STRN3Q13033 797 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 WIPI1Q5MNZ9 446 aaPredicted RBP4.82□□□□□ -1.64
SREK1-208ENST00000520580 WWC2Q6AWC2 1192 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 VN1R5Q7Z5H4 357 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 APBB1IPQ7Z5R6 666 aaPredicted RBP4.82□□□□□ -1.64
SREK1-208ENST00000520580 LEO1Q8WVC0 666 aaPredicted RBP4.82□□□□□ -1.64
SREK1-208ENST00000520580 PPP1R14AQ96A00 147 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 EVI5LQ96CN4 794 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 MTMR8Q96EF0 704 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 CCDC8Q9H0W5 538 aaPredicted RBP4.82□□□□□ -1.64
SREK1-208ENST00000520580 ZIM2Q9NZV7 527 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 PCDHA4Q9UN74 947 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 PCDHGC4Q9Y5F7 938 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 ALG1L2C9J202 215 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 BNIP3LO60238 219 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 SELPP16109 830 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 POLR2BP30876 1174 aaKnown RBP4.82□□□□□ -1.64
SREK1-208ENST00000520580 MCL1Q07820 350 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 INPP5AQ14642 412 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 SV2CQ496J9 727 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 SYCP2LQ5T4T6 812 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 LRRTM3Q86VH5 581 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 LRRC47Q8N1G4 583 aaKnown RBP4.82□□□□□ -1.64
SREK1-208ENST00000520580 REV1Q9UBZ9 1251 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 DNMT3LQ9UJW3 386 aa4.82□□□□□ -1.64
SREK1-208ENST00000520580 SENP3-EIF4A1A0A087X0R7 540 aa4.81□□□□□ -1.64
SREK1-208ENST00000520580 ECEL1O95672 775 aa4.81□□□□□ -1.64
SREK1-208ENST00000520580 ATF3P18847 181 aa4.81□□□□□ -1.64
SREK1-208ENST00000520580 SDSP20132 328 aa4.81□□□□□ -1.64
SREK1-208ENST00000520580 EPHB1P54762 984 aa4.81□□□□□ -1.64
SREK1-208ENST00000520580 ITKQ08881 620 aa4.81□□□□□ -1.64
SREK1-208ENST00000520580 ZNF252P-AS1Q0IIN9 211 aa4.81□□□□□ -1.64
SREK1-208ENST00000520580 MTMR1Q13613 665 aa4.81□□□□□ -1.64
SREK1-208ENST00000520580 GNPTABQ3T906 1256 aa4.81□□□□□ -1.64
SREK1-208ENST00000520580 AKAP4Q5JQC9 854 aa4.81□□□□□ -1.64
SREK1-208ENST00000520580 FIGNL1Q6PIW4 674 aa4.81□□□□□ -1.64
SREK1-208ENST00000520580 LHFPL2Q6ZUX7 228 aa4.81□□□□□ -1.64
SREK1-208ENST00000520580 AFAP1L2Q8N4X5 818 aa4.81□□□□□ -1.64
SREK1-208ENST00000520580 PLPPR2Q96GM1 343 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms