RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 GABPB1Q06547 395 aaPredicted RBP7.69□□□□□ -1.18
CDH12-203ENST00000517378 KMT5BQ4FZB7 885 aa7.69□□□□□ -1.18
CDH12-203ENST00000517378 NT5DC1Q5TFE4 455 aa7.69□□□□□ -1.18
CDH12-203ENST00000517378 CCDC102BQ68D86 513 aa7.69□□□□□ -1.18
CDH12-203ENST00000517378 METTL16Q86W50 562 aaKnown RBP7.69□□□□□ -1.18
CDH12-203ENST00000517378 DNAJC10Q8IXB1 793 aa7.69□□□□□ -1.18
CDH12-203ENST00000517378 AIFM3Q96NN9 605 aa7.69□□□□□ -1.18
CDH12-203ENST00000517378 NOL10Q9BSC4 688 aaKnown RBP7.69□□□□□ -1.18
CDH12-203ENST00000517378 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.69□□□□□ -1.18
CDH12-203ENST00000517378 TRMT1Q9NXH9 659 aaKnown RBP7.69□□□□□ -1.18
CDH12-203ENST00000517378 MROH5Q6ZUA9 1318 aa7.69□□□□□ -1.18
CDH12-203ENST00000517378 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.69□□□□□ -1.18
CDH12-203ENST00000517378 SPDYE4A6NLX3 237 aa7.69□□□□□ -1.18
CDH12-203ENST00000517378 BIN1O00499 593 aa7.69□□□□□ -1.18
CDH12-203ENST00000517378 MDM2Q00987 491 aaPredicted RBP7.69□□□□□ -1.18
CDH12-203ENST00000517378 PUM3Q15397 648 aaKnown RBP7.69□□□□□ -1.18
CDH12-203ENST00000517378 KRBA2Q6ZNG9 492 aa7.69□□□□□ -1.18
CDH12-203ENST00000517378 RAB11FIP4Q86YS3 637 aa7.69□□□□□ -1.18
CDH12-203ENST00000517378 VSTM4Q8IW00 320 aa7.69□□□□□ -1.18
CDH12-203ENST00000517378 PIGBQ92521 554 aa7.69□□□□□ -1.18
CDH12-203ENST00000517378 WASF1Q92558 559 aa7.69□□□□□ -1.18
CDH12-203ENST00000517378 CNNM2Q9H8M5 875 aa7.69□□□□□ -1.18
CDH12-203ENST00000517378 EPB41L4AQ9HCS5 686 aaPredicted RBP7.69□□□□□ -1.18
CDH12-203ENST00000517378 TBC1D2BQ9UPU7 963 aa7.69□□□□□ -1.18
CDH12-203ENST00000517378 B4E1Z4 1266 aa7.68□□□□□ -1.18
CDH12-203ENST00000517378 ERVV-1B6SEH8 477 aa7.68□□□□□ -1.18
CDH12-203ENST00000517378 PDE8AO60658 829 aa7.68□□□□□ -1.18
CDH12-203ENST00000517378 H2AFXP16104 143 aaPredicted RBP7.68□□□□□ -1.18
CDH12-203ENST00000517378 IFNAR1P17181 557 aa7.68□□□□□ -1.18
CDH12-203ENST00000517378 MARCKSP29966 332 aaPredicted RBP7.68□□□□□ -1.18
CDH12-203ENST00000517378 IARSP41252 1262 aaKnown RBP7.68□□□□□ -1.18
CDH12-203ENST00000517378 PHKA1P46020 1223 aa7.68□□□□□ -1.18
CDH12-203ENST00000517378 HLFQ16534 295 aa7.68□□□□□ -1.18
CDH12-203ENST00000517378 LPIN2Q92539 896 aa7.68□□□□□ -1.18
CDH12-203ENST00000517378 FBXW7Q969H0 707 aa7.68□□□□□ -1.18
CDH12-203ENST00000517378 SENP2Q9HC62 589 aa7.68□□□□□ -1.18
CDH12-203ENST00000517378 PNPLA7Q6ZV29 1317 aa7.68□□□□□ -1.18
CDH12-203ENST00000517378 BCL9LQ86UU0 1499 aa7.68□□□□□ -1.18
CDH12-203ENST00000517378 GOLGA8AA7E2F4 631 aa7.68□□□□□ -1.18
CDH12-203ENST00000517378 PATL2C9JE40 543 aaKnown RBP7.68□□□□□ -1.18
CDH12-203ENST00000517378 MMP1P03956 469 aa7.68□□□□□ -1.18
CDH12-203ENST00000517378 CYP19A1P11511 503 aaPredicted RBP7.68□□□□□ -1.18
CDH12-203ENST00000517378 ATP1A3P13637 1013 aa7.68□□□□□ -1.18
CDH12-203ENST00000517378 LMOD1P29536 600 aaPredicted RBP7.68□□□□□ -1.18
CDH12-203ENST00000517378 TRIM29Q14134 588 aa7.68□□□□□ -1.18
CDH12-203ENST00000517378 NOSTRINQ8IVI9 506 aa7.68□□□□□ -1.18
CDH12-203ENST00000517378 ZNF579Q8NAF0 562 aaKnown RBP7.68□□□□□ -1.18
CDH12-203ENST00000517378 STAG1Q8WVM7 1258 aa7.68□□□□□ -1.18
CDH12-203ENST00000517378 PHKBQ93100 1093 aa7.68□□□□□ -1.18
CDH12-203ENST00000517378 CNNM1Q9NRU3 951 aa7.68□□□□□ -1.18
CDH12-203ENST00000517378 KCNH3Q9ULD8 1083 aa7.68□□□□□ -1.18
CDH12-203ENST00000517378 WWC3Q9ULE0 1092 aa7.68□□□□□ -1.18
CDH12-203ENST00000517378 ASAP1Q9ULH1 1129 aa7.68□□□□□ -1.18
CDH12-203ENST00000517378 COL14A1Q05707 1796 aaKnown RBP7.67□□□□□ -1.18
CDH12-203ENST00000517378 MYH6P13533 1939 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 IRS4O14654 1257 aaPredicted RBP7.67□□□□□ -1.18
CDH12-203ENST00000517378 IDH1O75874 414 aaKnown RBP7.67□□□□□ -1.18
CDH12-203ENST00000517378 UBASH3AP57075 661 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 ETF1P62495 437 aaKnown RBP7.67□□□□□ -1.18
CDH12-203ENST00000517378 TBX2Q13207 712 aaPredicted RBP7.67□□□□□ -1.18
CDH12-203ENST00000517378 PNOCQ13519 176 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 ELF2Q15723 593 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 TMEM67Q5HYA8 995 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 FBXO38Q6PIJ6 1188 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 MICU3Q86XE3 530 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 TMEM139Q8IV31 216 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 IFNL3Q8IZI9 196 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 STK11IPQ8N1F8 1099 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 SYNE4Q8N205 404 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 KRI1Q8N9T8 703 aaKnown RBP7.67□□□□□ -1.18
CDH12-203ENST00000517378 AIDAQ96BJ3 306 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 CCDC85AQ96PX6 553 aaPredicted RBP7.67□□□□□ -1.18
CDH12-203ENST00000517378 KRT23Q9C075 422 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 FOXP1Q9H334 677 aaPredicted RBP7.67□□□□□ -1.18
CDH12-203ENST00000517378 RTL9Q8NET4 1388 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 DOT1LQ8TEK3 1739 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 GNAT2P19087 354 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 PTPREP23469 700 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 SARSP49591 514 aaKnown RBP7.67□□□□□ -1.18
CDH12-203ENST00000517378 SSRP1Q08945 709 aaKnown RBP7.67□□□□□ -1.18
CDH12-203ENST00000517378 LONRF3Q496Y0 759 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 TRIM65Q6PJ69 517 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 FOXP4Q8IVH2 680 aaPredicted RBP7.67□□□□□ -1.18
CDH12-203ENST00000517378 KRT222Q8N1A0 295 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 TRIML1Q8N9V2 468 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 SPATA5Q8NB90 893 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 DPF2Q92785 391 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 INTS13Q9NVM9 706 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 ZSWIM5Q9P217 1185 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 FBXO2Q9UK22 296 aaPredicted RBP7.67□□□□□ -1.18
CDH12-203ENST00000517378 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.67□□□□□ -1.18
CDH12-203ENST00000517378 TACC3Q9Y6A5 838 aa7.67□□□□□ -1.18
CDH12-203ENST00000517378 ZNF18P17022 549 aa7.66□□□□□ -1.18
CDH12-203ENST00000517378 BMP6P22004 513 aa7.66□□□□□ -1.18
CDH12-203ENST00000517378 FAM193AP78312 1265 aa7.66□□□□□ -1.18
CDH12-203ENST00000517378 RILPL1Q5EBL4 403 aa7.66□□□□□ -1.18
CDH12-203ENST00000517378 AKNAD1Q5T1N1 836 aa7.66□□□□□ -1.18
CDH12-203ENST00000517378 OLFM4Q6UX06 510 aa7.66□□□□□ -1.18
CDH12-203ENST00000517378 SYT10Q6XYQ8 523 aa7.66□□□□□ -1.18
CDH12-203ENST00000517378 ZNF34Q8IZ26 560 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms