RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 FGAP02671 866 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 LDHCP07864 332 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 CYP21A2P08686 494 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 CTAGE8P0CG41 777 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 KCNA6P17658 529 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 CALML3P27482 149 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 CALRP27797 417 aaKnown RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 LTKP29376 864 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 LMOD1P29536 600 aaPredicted RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 KIF5BP33176 963 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 RDXP35241 583 aaKnown RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 CYLC1P35663 651 aaPredicted RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 IGHMBP2P38935 993 aaKnown RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 LIFRP42702 1097 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 TDO2P48775 406 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 RCAN1P53805 252 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 EIF5P55010 431 aaKnown RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 EVCP57679 992 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 GUCY1B3Q02153 619 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 PTPN12Q05209 780 aaKnown RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 PDE4BQ07343 736 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 KIF5AQ12840 1032 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 RESTQ13127 1097 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 TRIM28Q13263 835 aaKnown RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 SF3B2Q13435 895 aaKnown RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 TCIRG1Q13488 830 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 CAMK2BQ13554 666 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 WTAPQ15007 396 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 ALX1Q15699 326 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 CLUL1Q15846 466 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 IFI16Q16666 785 aaKnown RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 ATP2B3Q16720 1220 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 ERCC6LQ2NKX8 1250 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 RABL6Q3YEC7 729 aaPredicted RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 FKBP15Q5T1M5 1219 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 TMCO4Q5TGY1 634 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 CCDC181Q5TID7 509 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 MYSM1Q5VVJ2 828 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 SPATA1Q5VX52 437 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 SPTY2D1Q68D10 685 aaPredicted RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 GALNT17Q6IS24 598 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 KRBA2Q6ZNG9 492 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 TOM1L2Q6ZVM7 507 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 B4GALNT4Q76KP1 1039 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 DDX46Q7L014 1031 aaKnown RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 NBPF11Q86T75 865 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 KIAA1328Q86T90 577 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 CTAGE6Q86UF2 777 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 CCDC84Q86UT8 332 aaPredicted RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 CADPS2Q86UW7 1296 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 ARHGEF25Q86VW2 580 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 SPATS2Q86XZ4 545 aaKnown RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 CERS3Q8IU89 383 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 FMNL3Q8IVF7 1028 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 VSTM4Q8IW00 320 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 CTAGE4Q8IX94 777 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 FMR1NBQ8N0W7 255 aaPredicted RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 FAM177A1Q8N128 213 aaPredicted RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 MSL3Q8N5Y2 521 aaKnown RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 USHBP1Q8N6Y0 703 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 RETREG2Q8NC44 543 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 NSUN7Q8NE18 718 aaKnown RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 ENGASEQ8NFI3 743 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 GOLGA5Q8TBA6 731 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 CAGE1Q8TC20 777 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 ENOX1Q8TC92 643 aaKnown RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 DDX54Q8TDD1 881 aaKnown RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 KCNV2Q8TDN2 545 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 LMBR1Q8WVP7 490 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 HNRNPLLQ8WVV9 542 aaKnown RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 EXOC4Q96A65 974 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 XAGE2Q96GT9 111 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 PGBD1Q96JS3 809 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 ZNF512BQ96KM6 892 aaPredicted RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 CDC5LQ99459 802 aaKnown RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 LZTS2Q9BRK4 669 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 SLC26A6Q9BXS9 759 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 RAB34Q9BZG1 259 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 TSGA10Q9BZW7 698 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 XPO4Q9C0E2 1151 aaKnown RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 NUCKS1Q9H1E3 243 aaKnown RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 TMX4Q9H1E5 349 aaPredicted RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 RASSF4Q9H2L5 321 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 MED4Q9NPJ6 270 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 GPHNQ9NQX3 736 aaPredicted RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 PSD3Q9NYI0 1048 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 TMOD3Q9NYL9 352 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 WWC3Q9ULE0 1092 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 PYCARDQ9ULZ3 195 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 ZNF652Q9Y2D9 606 aa2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 LUC7L2Q9Y383 392 aaKnown RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 ZNF330Q9Y3S2 320 aaPredicted RBP2.34□□□□□ -2.03
RNU1-40P-201ENST00000516816 MROH5Q6ZUA9 1318 aa2.34□□□□□ -2.04
RNU1-40P-201ENST00000516816 PRR36Q9H6K5 1346 aa2.34□□□□□ -2.04
RNU1-40P-201ENST00000516816 COL15A1P39059 1388 aa2.34□□□□□ -2.04
RNU1-40P-201ENST00000516816 RTL9Q8NET4 1388 aa2.34□□□□□ -2.04
RNU1-40P-201ENST00000516816 CEMIPQ8WUJ3 1361 aa2.34□□□□□ -2.04
RNU1-40P-201ENST00000516816 PALLDQ8WX93 1383 aa2.34□□□□□ -2.04
RNU1-40P-201ENST00000516816 PLEKHG2Q9H7P9 1386 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms