RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 BCORQ6W2J9 1755 aa20.24■□□□□ 0.83
SNX2-213ENST00000514949 CUTAO60888 179 aa20.24■□□□□ 0.83
SNX2-213ENST00000514949 MARCKSP29966 332 aaPredicted RBP20.24■□□□□ 0.83
SNX2-213ENST00000514949 TRIM29Q14134 588 aa20.24■□□□□ 0.83
SNX2-213ENST00000514949 PARP10Q53GL7 1025 aa20.24■□□□□ 0.83
SNX2-213ENST00000514949 INTS5Q6P9B9 1019 aaKnown RBP20.24■□□□□ 0.83
SNX2-213ENST00000514949 HELBQ8NG08 1087 aaPredicted RBP20.24■□□□□ 0.83
SNX2-213ENST00000514949 RXRAP19793 462 aa20.23■□□□□ 0.83
SNX2-213ENST00000514949 NFXL1Q6ZNB6 911 aa20.23■□□□□ 0.83
SNX2-213ENST00000514949 UTP14AQ9BVJ6 771 aaKnown RBP20.23■□□□□ 0.83
SNX2-213ENST00000514949 TACC3Q9Y6A5 838 aa20.23■□□□□ 0.83
SNX2-213ENST00000514949 CICQ96RK0 1608 aaPredicted RBP20.23■□□□□ 0.83
SNX2-213ENST00000514949 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.23■□□□□ 0.83
SNX2-213ENST00000514949 IFIT3O14879 490 aaKnown RBP20.23■□□□□ 0.83
SNX2-213ENST00000514949 MYO1BO43795 1136 aa20.23■□□□□ 0.83
SNX2-213ENST00000514949 SSRP1Q08945 709 aaKnown RBP20.23■□□□□ 0.83
SNX2-213ENST00000514949 CEP135Q66GS9 1140 aa20.23■□□□□ 0.83
SNX2-213ENST00000514949 CCAR2Q8N163 923 aaKnown RBP20.23■□□□□ 0.83
SNX2-213ENST00000514949 CCDC150Q8NCX0 1101 aa20.23■□□□□ 0.83
SNX2-213ENST00000514949 MPHOSPH8Q99549 860 aa20.23■□□□□ 0.83
SNX2-213ENST00000514949 XPO4Q9C0E2 1151 aaKnown RBP20.23■□□□□ 0.83
SNX2-213ENST00000514949 MFSD6Q6ZSS7 791 aa20.22■□□□□ 0.83
SNX2-213ENST00000514949 TMTC2Q8N394 836 aa20.22■□□□□ 0.83
SNX2-213ENST00000514949 NACAP1Q9BZK3 213 aa20.22■□□□□ 0.83
SNX2-213ENST00000514949 CCDC112Q8NEF3 446 aa20.21■□□□□ 0.83
SNX2-213ENST00000514949 CDCA7Q9BWT1 371 aaPredicted RBP20.21■□□□□ 0.83
SNX2-213ENST00000514949 HSD3B7Q9H2F3 369 aa20.21■□□□□ 0.83
SNX2-213ENST00000514949 ARMT1Q9H993 441 aa20.21■□□□□ 0.83
SNX2-213ENST00000514949 LAMB2P55268 1798 aa20.21■□□□□ 0.83
SNX2-213ENST00000514949 KAT6BQ8WYB5 2073 aa20.21■□□□□ 0.83
SNX2-213ENST00000514949 DOT1LQ8TEK3 1739 aa20.21■□□□□ 0.83
SNX2-213ENST00000514949 USP27XA6NNY8 438 aa20.21■□□□□ 0.83
SNX2-213ENST00000514949 FAM177BA6PVY3 158 aa20.21■□□□□ 0.83
SNX2-213ENST00000514949 KIF2AO00139 706 aaPredicted RBP20.21■□□□□ 0.83
SNX2-213ENST00000514949 PTPN14Q15678 1187 aa20.21■□□□□ 0.83
SNX2-213ENST00000514949 CCDC152Q4G0S7 254 aa20.21■□□□□ 0.83
SNX2-213ENST00000514949 INCENPQ9NQS7 918 aa20.21■□□□□ 0.83
SNX2-213ENST00000514949 CCDC87Q9NVE4 849 aa20.21■□□□□ 0.83
SNX2-213ENST00000514949 IFNKQ9P0W0 207 aa20.21■□□□□ 0.83
SNX2-213ENST00000514949 COL22A1Q8NFW1 1626 aaPredicted RBP20.21■□□□□ 0.83
SNX2-213ENST00000514949 CTDSPL2Q05D32 466 aa20.2■□□□□ 0.82
SNX2-213ENST00000514949 GNL2Q13823 731 aaKnown RBP20.2■□□□□ 0.82
SNX2-213ENST00000514949 NOSTRINQ8IVI9 506 aa20.2■□□□□ 0.82
SNX2-213ENST00000514949 PHLPP1O60346 1717 aa20.2■□□□□ 0.82
SNX2-213ENST00000514949 CAMTA2O94983 1202 aa20.2■□□□□ 0.82
SNX2-213ENST00000514949 MMP1P03956 469 aa20.2■□□□□ 0.82
SNX2-213ENST00000514949 COL16A1Q07092 1604 aaPredicted RBP20.2■□□□□ 0.82
SNX2-213ENST00000514949 NCBP1Q09161 790 aaKnown RBP20.2■□□□□ 0.82
SNX2-213ENST00000514949 SART3Q15020 963 aaKnown RBP20.2■□□□□ 0.82
SNX2-213ENST00000514949 BCL9LQ86UU0 1499 aa20.2■□□□□ 0.82
SNX2-213ENST00000514949 PDCL2Q8N4E4 241 aa20.2■□□□□ 0.82
SNX2-213ENST00000514949 FOXP1Q9H334 677 aaPredicted RBP20.2■□□□□ 0.82
SNX2-213ENST00000514949 MORC2Q9Y6X9 1032 aaPredicted RBP20.2■□□□□ 0.82
SNX2-213ENST00000514949 BIN1O00499 593 aa20.19■□□□□ 0.82
SNX2-213ENST00000514949 FBXW7Q969H0 707 aa20.19■□□□□ 0.82
SNX2-213ENST00000514949 SYTL4Q96C24 671 aaPredicted RBP20.19■□□□□ 0.82
SNX2-213ENST00000514949 SLC26A6Q9BXS9 759 aa20.19■□□□□ 0.82
SNX2-213ENST00000514949 SEC31BQ9NQW1 1179 aa20.19■□□□□ 0.82
SNX2-213ENST00000514949 CCDC196A0A1B0GTZ2 297 aa20.18■□□□□ 0.82
SNX2-213ENST00000514949 LCORLQ8N3X6 602 aa20.18■□□□□ 0.82
SNX2-213ENST00000514949 KRI1Q8N9T8 703 aaKnown RBP20.18■□□□□ 0.82
SNX2-213ENST00000514949 MYL10Q9BUA6 226 aa20.18■□□□□ 0.82
SNX2-213ENST00000514949 RNF41Q9H4P4 317 aaPredicted RBP20.18■□□□□ 0.82
SNX2-213ENST00000514949 KCNH3Q9ULD8 1083 aa20.18■□□□□ 0.82
SNX2-213ENST00000514949 PSDA5PKW4 1024 aaPredicted RBP20.18■□□□□ 0.82
SNX2-213ENST00000514949 IGHMBP2P38935 993 aaKnown RBP20.18■□□□□ 0.82
SNX2-213ENST00000514949 PPP2R5BQ15173 497 aa20.18■□□□□ 0.82
SNX2-213ENST00000514949 ARMCX5Q6P1M9 558 aa20.18■□□□□ 0.82
SNX2-213ENST00000514949 KRBA2Q6ZNG9 492 aa20.18■□□□□ 0.82
SNX2-213ENST00000514949 TRIM22Q8IYM9 498 aa20.18■□□□□ 0.82
SNX2-213ENST00000514949 ANAPC4Q9UJX5 808 aa20.18■□□□□ 0.82
SNX2-213ENST00000514949 SMC2O95347 1197 aa20.17■□□□□ 0.82
SNX2-213ENST00000514949 NTSR2O95665 410 aa20.17■□□□□ 0.82
SNX2-213ENST00000514949 TUBB4AP04350 444 aa20.17■□□□□ 0.82
SNX2-213ENST00000514949 BCAMP50895 628 aa20.17■□□□□ 0.82
SNX2-213ENST00000514949 FANCCQ00597 558 aa20.17■□□□□ 0.82
SNX2-213ENST00000514949 MYL5Q02045 173 aa20.17■□□□□ 0.82
SNX2-213ENST00000514949 WTAPQ15007 396 aa20.17■□□□□ 0.82
SNX2-213ENST00000514949 SAFBQ15424 915 aaKnown RBP eCLIP20.17■□□□□ 0.82
SNX2-213ENST00000514949 RTN1Q16799 776 aa20.17■□□□□ 0.82
SNX2-213ENST00000514949 RILPL1Q5EBL4 403 aa20.17■□□□□ 0.82
SNX2-213ENST00000514949 METTL16Q86W50 562 aaKnown RBP20.17■□□□□ 0.82
SNX2-213ENST00000514949 NOL10Q9BSC4 688 aaKnown RBP20.17■□□□□ 0.82
SNX2-213ENST00000514949 SLC4A4Q9Y6R1 1079 aa20.17■□□□□ 0.82
SNX2-213ENST00000514949 ZNF804BA4D1E1 1349 aa20.17■□□□□ 0.82
SNX2-213ENST00000514949 KDM4FA0A1W2PPD8 638 aa20.17■□□□□ 0.82
SNX2-213ENST00000514949 SNAP23O00161 211 aa20.17■□□□□ 0.82
SNX2-213ENST00000514949 PRKAB2O43741 272 aa20.17■□□□□ 0.82
SNX2-213ENST00000514949 DEXIO95424 95 aa20.17■□□□□ 0.82
SNX2-213ENST00000514949 CRKLP46109 303 aaKnown RBP20.17■□□□□ 0.82
SNX2-213ENST00000514949 TOB1P50616 345 aaPredicted RBP20.17■□□□□ 0.82
SNX2-213ENST00000514949 MDM2Q00987 491 aaPredicted RBP20.17■□□□□ 0.82
SNX2-213ENST00000514949 SMAP1Q8IYB5 467 aaPredicted RBP20.17■□□□□ 0.82
SNX2-213ENST00000514949 CRACR2BQ8N4Y2 399 aaPredicted RBP20.17■□□□□ 0.82
SNX2-213ENST00000514949 ZNF579Q8NAF0 562 aaKnown RBP20.17■□□□□ 0.82
SNX2-213ENST00000514949 CLIC6Q96NY7 704 aa20.17■□□□□ 0.82
SNX2-213ENST00000514949 SFPQP23246 707 aaKnown RBP eCLIP20.16■□□□□ 0.82
SNX2-213ENST00000514949 PTPREP23469 700 aa20.16■□□□□ 0.82
SNX2-213ENST00000514949 TDO2P48775 406 aa20.16■□□□□ 0.82
SNX2-213ENST00000514949 LONRF3Q496Y0 759 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms