RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 FERD3LQ96RJ6 166 aa6.69□□□□□ -1.34
NIPBL-207ENST00000513819 LNPKQ9C0E8 428 aa6.69□□□□□ -1.34
NIPBL-207ENST00000513819 STRIP2Q9ULQ0 834 aa6.69□□□□□ -1.34
NIPBL-207ENST00000513819 PCDHB14Q9Y5E9 798 aa6.69□□□□□ -1.34
NIPBL-207ENST00000513819 CSADQ9Y600 493 aa6.69□□□□□ -1.34
NIPBL-207ENST00000513819 SHROOM4Q9ULL8 1493 aa6.68□□□□□ -1.34
NIPBL-207ENST00000513819 GFRA2O00451 464 aa6.68□□□□□ -1.34
NIPBL-207ENST00000513819 DLL1O00548 723 aa6.68□□□□□ -1.34
NIPBL-207ENST00000513819 RAC1P63000 192 aa6.68□□□□□ -1.34
NIPBL-207ENST00000513819 DUOXA2Q1HG44 320 aa6.68□□□□□ -1.34
NIPBL-207ENST00000513819 KIF4BQ2VIQ3 1234 aa6.68□□□□□ -1.34
NIPBL-207ENST00000513819 ELMO3Q96BJ8 720 aa6.68□□□□□ -1.34
NIPBL-207ENST00000513819 SHDQ96IW2 340 aa6.68□□□□□ -1.34
NIPBL-207ENST00000513819 WDR18Q9BV38 432 aa6.68□□□□□ -1.34
NIPBL-207ENST00000513819 HIRIP3Q9BW71 556 aaPredicted RBP6.68□□□□□ -1.34
NIPBL-207ENST00000513819 CORINQ9Y5Q5 1042 aa6.68□□□□□ -1.34
NIPBL-207ENST00000513819 AOC2O75106 756 aa6.67□□□□□ -1.34
NIPBL-207ENST00000513819 C12orf40Q86WS4 652 aa6.67□□□□□ -1.34
NIPBL-207ENST00000513819 RAD18Q9NS91 495 aa6.67□□□□□ -1.34
NIPBL-207ENST00000513819 SNCAIPQ9Y6H5 919 aa6.67□□□□□ -1.34
NIPBL-207ENST00000513819 GNB5O14775 395 aa6.66□□□□□ -1.34
NIPBL-207ENST00000513819 EIF6P56537 245 aaKnown RBP6.66□□□□□ -1.34
NIPBL-207ENST00000513819 INSM1Q01101 510 aaPredicted RBP6.66□□□□□ -1.34
NIPBL-207ENST00000513819 TRIM28Q13263 835 aaKnown RBP6.66□□□□□ -1.34
NIPBL-207ENST00000513819 AKAP4Q5JQC9 854 aa6.66□□□□□ -1.34
NIPBL-207ENST00000513819 EXOSC6Q5RKV6 272 aaKnown RBP6.66□□□□□ -1.34
NIPBL-207ENST00000513819 HP1BP3Q5SSJ5 553 aaPredicted RBP6.66□□□□□ -1.34
NIPBL-207ENST00000513819 ANKS3Q6ZW76 656 aa6.66□□□□□ -1.34
NIPBL-207ENST00000513819 ACAD11Q709F0 780 aa6.66□□□□□ -1.34
NIPBL-207ENST00000513819 HDXQ7Z353 690 aa6.66□□□□□ -1.34
NIPBL-207ENST00000513819 REXO1Q8N1G1 1221 aaKnown RBP6.66□□□□□ -1.34
NIPBL-207ENST00000513819 FAM169BQ8N8A8 192 aa6.66□□□□□ -1.34
NIPBL-207ENST00000513819 DCAF11Q8TEB1 546 aa6.66□□□□□ -1.34
NIPBL-207ENST00000513819 RUSC1Q9BVN2 902 aa6.66□□□□□ -1.34
NIPBL-207ENST00000513819 MKL2Q9ULH7 1088 aa6.66□□□□□ -1.34
NIPBL-207ENST00000513819 ZNRF3Q9ULT6 936 aa6.66□□□□□ -1.34
NIPBL-207ENST00000513819 PCDHGC5Q9Y5F6 944 aa6.66□□□□□ -1.34
NIPBL-207ENST00000513819 PRAMEF27A3QJZ7 478 aa6.65□□□□□ -1.34
NIPBL-207ENST00000513819 SLFN14P0C7P3 912 aa6.65□□□□□ -1.34
NIPBL-207ENST00000513819 HNRNPUQ00839 825 aaKnown RBP eCLIP6.65□□□□□ -1.34
NIPBL-207ENST00000513819 CCDC144BQ3MJ40 725 aa6.65□□□□□ -1.34
NIPBL-207ENST00000513819 ZC3H12AQ5D1E8 599 aaKnown RBP6.65□□□□□ -1.34
NIPBL-207ENST00000513819 KIAA1211Q6ZU35 1233 aa6.65□□□□□ -1.34
NIPBL-207ENST00000513819 CKAP2LQ8IYA6 745 aa6.65□□□□□ -1.34
NIPBL-207ENST00000513819 HNRNPLLQ8WVV9 542 aaKnown RBP6.65□□□□□ -1.34
NIPBL-207ENST00000513819 CRBNQ96SW2 442 aa6.65□□□□□ -1.34
NIPBL-207ENST00000513819 TMPRSS13Q9BYE2 586 aa6.65□□□□□ -1.34
NIPBL-207ENST00000513819 ANTXR1Q9H6X2 564 aa6.65□□□□□ -1.34
NIPBL-207ENST00000513819 EHMT1Q9H9B1 1298 aa6.65□□□□□ -1.34
NIPBL-207ENST00000513819 PPP1R9AQ9ULJ8 1098 aa6.65□□□□□ -1.34
NIPBL-207ENST00000513819 SPDYE3A6NKU9 549 aa6.64□□□□□ -1.35
NIPBL-207ENST00000513819 SMAD7O15105 426 aaKnown RBP6.64□□□□□ -1.35
NIPBL-207ENST00000513819 TMPRSS2O15393 492 aa6.64□□□□□ -1.35
NIPBL-207ENST00000513819 HTR3BO95264 441 aa6.64□□□□□ -1.35
NIPBL-207ENST00000513819 LORP23490 312 aaPredicted RBP6.64□□□□□ -1.35
NIPBL-207ENST00000513819 GIPRP48546 466 aa6.64□□□□□ -1.35
NIPBL-207ENST00000513819 PPM1JQ5JR12 505 aa6.64□□□□□ -1.35
NIPBL-207ENST00000513819 CYFIP1Q7L576 1253 aa6.64□□□□□ -1.35
NIPBL-207ENST00000513819 PRKAG3Q9UGI9 489 aa6.64□□□□□ -1.35
NIPBL-207ENST00000513819 HIF3AQ9Y2N7 669 aa6.64□□□□□ -1.35
NIPBL-207ENST00000513819 WIPF1O43516 503 aa6.63□□□□□ -1.35
NIPBL-207ENST00000513819 ATE1O95260 518 aa6.63□□□□□ -1.35
NIPBL-207ENST00000513819 PLCG1P19174 1290 aa6.63□□□□□ -1.35
NIPBL-207ENST00000513819 GRK4P32298 578 aa6.63□□□□□ -1.35
NIPBL-207ENST00000513819 ID3Q02535 119 aa6.63□□□□□ -1.35
NIPBL-207ENST00000513819 GRIK4Q16099 956 aa6.63□□□□□ -1.35
NIPBL-207ENST00000513819 SOGA3Q5TF21 947 aa6.63□□□□□ -1.35
NIPBL-207ENST00000513819 NUTM2GQ5VZR2 741 aa6.63□□□□□ -1.35
NIPBL-207ENST00000513819 SHISA2Q6UWI4 295 aa6.63□□□□□ -1.35
NIPBL-207ENST00000513819 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.63□□□□□ -1.35
NIPBL-207ENST00000513819 LSRQ86X29 649 aaPredicted RBP6.63□□□□□ -1.35
NIPBL-207ENST00000513819 AGGF1Q8N302 714 aaeCLIP6.63□□□□□ -1.35
NIPBL-207ENST00000513819 CNTNAP5Q8WYK1 1306 aa6.63□□□□□ -1.35
NIPBL-207ENST00000513819 RNF208Q9H0X6 261 aa6.63□□□□□ -1.35
NIPBL-207ENST00000513819 OSBPL2Q9H1P3 480 aa6.63□□□□□ -1.35
NIPBL-207ENST00000513819 PICK1Q9NRD5 415 aa6.63□□□□□ -1.35
NIPBL-207ENST00000513819 REV1Q9UBZ9 1251 aa6.63□□□□□ -1.35
NIPBL-207ENST00000513819 AP4E1Q9UPM8 1137 aa6.63□□□□□ -1.35
NIPBL-207ENST00000513819 PRR36Q9H6K5 1346 aa6.62□□□□□ -1.35
NIPBL-207ENST00000513819 LOC100996750A0A140TA64 210 aa6.62□□□□□ -1.35
NIPBL-207ENST00000513819 PIK3R2O00459 728 aa6.62□□□□□ -1.35
NIPBL-207ENST00000513819 KLF4O43474 513 aa6.62□□□□□ -1.35
NIPBL-207ENST00000513819 DNAJA2O60884 412 aa6.62□□□□□ -1.35
NIPBL-207ENST00000513819 PGRP06401 933 aa6.62□□□□□ -1.35
NIPBL-207ENST00000513819 IMPDH2P12268 514 aa6.62□□□□□ -1.35
NIPBL-207ENST00000513819 DRD2P14416 443 aa6.62□□□□□ -1.35
NIPBL-207ENST00000513819 ELNP15502 786 aa6.62□□□□□ -1.35
NIPBL-207ENST00000513819 PRRT3Q5FWE3 981 aa6.62□□□□□ -1.35
NIPBL-207ENST00000513819 IGF2-ASQ6U949 168 aa6.62□□□□□ -1.35
NIPBL-207ENST00000513819 RUFY4Q6ZNE9 571 aa6.62□□□□□ -1.35
NIPBL-207ENST00000513819 FANCD2OSQ96PS1 177 aa6.62□□□□□ -1.35
NIPBL-207ENST00000513819 KRTAP4-6Q9BYQ5 205 aa6.62□□□□□ -1.35
NIPBL-207ENST00000513819 MRPL18Q9H0U6 180 aaKnown RBP6.62□□□□□ -1.35
NIPBL-207ENST00000513819 PIF1Q9H611 641 aa6.62□□□□□ -1.35
NIPBL-207ENST00000513819 ZSWIM4Q9H7M6 989 aa6.62□□□□□ -1.35
NIPBL-207ENST00000513819 CRIM1Q9NZV1 1036 aa6.62□□□□□ -1.35
NIPBL-207ENST00000513819 SYNGAP1Q96PV0 1343 aa6.61□□□□□ -1.35
NIPBL-207ENST00000513819 MEGF11A6BM72 1044 aa6.61□□□□□ -1.35
NIPBL-207ENST00000513819 ADH5P11766 374 aa6.61□□□□□ -1.35
NIPBL-207ENST00000513819 ETF1P62495 437 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms