RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 FMR1NBQ8N0W7 255 aaPredicted RBP5.38□□□□□ -1.55
UBE2D3-226ENST00000508635 FBXO41Q8TF61 875 aa5.38□□□□□ -1.55
UBE2D3-226ENST00000508635 SLC7A3Q8WY07 619 aa5.38□□□□□ -1.55
UBE2D3-226ENST00000508635 BSNDQ8WZ55 320 aa5.38□□□□□ -1.55
UBE2D3-226ENST00000508635 BHLHE41Q9C0J9 482 aaPredicted RBP5.38□□□□□ -1.55
UBE2D3-226ENST00000508635 ADAM19Q9H013 955 aa5.38□□□□□ -1.55
UBE2D3-226ENST00000508635 MUC3BQ9H195 1237 aa5.38□□□□□ -1.55
UBE2D3-226ENST00000508635 RNF19AQ9NV58 838 aa5.38□□□□□ -1.55
UBE2D3-226ENST00000508635 PTPRKQ15262 1439 aa5.38□□□□□ -1.55
UBE2D3-226ENST00000508635 CLTCQ00610 1675 aaKnown RBP5.37□□□□□ -1.55
UBE2D3-226ENST00000508635 STRCQ7RTU9 1775 aa5.37□□□□□ -1.55
UBE2D3-226ENST00000508635 TAGLNQ01995 201 aaKnown RBP5.37□□□□□ -1.55
UBE2D3-226ENST00000508635 SETDB1Q15047 1291 aa5.37□□□□□ -1.55
UBE2D3-226ENST00000508635 HGSNATQ68CP4 663 aa5.37□□□□□ -1.55
UBE2D3-226ENST00000508635 ALG1LQ6GMV1 187 aa5.37□□□□□ -1.55
UBE2D3-226ENST00000508635 FAM117BQ6P1L5 589 aa5.37□□□□□ -1.55
UBE2D3-226ENST00000508635 NXPE4Q6UWF7 544 aa5.37□□□□□ -1.55
UBE2D3-226ENST00000508635 VN1R5Q7Z5H4 357 aa5.37□□□□□ -1.55
UBE2D3-226ENST00000508635 CACTIN-AS1Q8N1I8 211 aa5.37□□□□□ -1.55
UBE2D3-226ENST00000508635 BCO2Q9BYV7 579 aa5.37□□□□□ -1.55
UBE2D3-226ENST00000508635 SOX13Q9UN79 622 aa5.37□□□□□ -1.55
UBE2D3-226ENST00000508635 MAST1Q9Y2H9 1570 aa5.37□□□□□ -1.55
UBE2D3-226ENST00000508635 H3BRJ5 948 aa5.36□□□□□ -1.55
UBE2D3-226ENST00000508635 FSCN2O14926 492 aa5.36□□□□□ -1.55
UBE2D3-226ENST00000508635 FCGRTP55899 365 aa5.36□□□□□ -1.55
UBE2D3-226ENST00000508635 IKBKEQ14164 716 aa5.36□□□□□ -1.55
UBE2D3-226ENST00000508635 FBXO11Q86XK2 927 aa5.36□□□□□ -1.55
UBE2D3-226ENST00000508635 GALNT11Q8NCW6 608 aa5.36□□□□□ -1.55
UBE2D3-226ENST00000508635 DUSP9Q99956 384 aaKnown RBP5.36□□□□□ -1.55
UBE2D3-226ENST00000508635 ABCB6Q9NP58 842 aa5.36□□□□□ -1.55
UBE2D3-226ENST00000508635 PCMTD2Q9NV79 361 aa5.36□□□□□ -1.55
UBE2D3-226ENST00000508635 WASHC2CQ9Y4E1 1318 aa5.36□□□□□ -1.55
UBE2D3-226ENST00000508635 PTPRTO14522 1441 aa5.36□□□□□ -1.55
UBE2D3-226ENST00000508635 NCOA1Q15788 1441 aa5.36□□□□□ -1.55
UBE2D3-226ENST00000508635 FAM135AQ9P2D6 1515 aa5.36□□□□□ -1.55
UBE2D3-226ENST00000508635 SETD1BQ9UPS6 1966 aaKnown RBP5.36□□□□□ -1.55
UBE2D3-226ENST00000508635 CAMSAP1Q5T5Y3 1602 aa5.35□□□□□ -1.55
UBE2D3-226ENST00000508635 MYO3AQ8NEV4 1616 aa5.35□□□□□ -1.55
UBE2D3-226ENST00000508635 KDM5DQ9BY66 1539 aa5.35□□□□□ -1.55
UBE2D3-226ENST00000508635 TCOF1Q13428 1488 aaKnown RBP5.35□□□□□ -1.55
UBE2D3-226ENST00000508635 ABCC5O15440 1437 aa5.35□□□□□ -1.55
UBE2D3-226ENST00000508635 TMEM238LA0A1B0GVL6 79 aa5.35□□□□□ -1.55
UBE2D3-226ENST00000508635 SOX1O00570 391 aaPredicted RBP5.35□□□□□ -1.55
UBE2D3-226ENST00000508635 DDX3YO15523 660 aaKnown RBP5.35□□□□□ -1.55
UBE2D3-226ENST00000508635 SELPP16109 830 aa5.35□□□□□ -1.55
UBE2D3-226ENST00000508635 TAL1P17542 331 aaPredicted RBP5.35□□□□□ -1.55
UBE2D3-226ENST00000508635 DTWD1Q8N5C7 304 aa5.35□□□□□ -1.55
UBE2D3-226ENST00000508635 GLIS3Q8NEA6 775 aa5.35□□□□□ -1.55
UBE2D3-226ENST00000508635 FBF1Q8TES7 1133 aa5.35□□□□□ -1.55
UBE2D3-226ENST00000508635 KLHDC7BQ96G42 594 aa5.35□□□□□ -1.55
UBE2D3-226ENST00000508635 OSBPL7Q9BZF2 842 aa5.35□□□□□ -1.55
UBE2D3-226ENST00000508635 PPP4R2Q9NY27 417 aa5.35□□□□□ -1.55
UBE2D3-226ENST00000508635 TRAK1Q9UPV9 953 aa5.35□□□□□ -1.55
UBE2D3-226ENST00000508635 PTPN23Q9H3S7 1636 aa5.34□□□□□ -1.55
UBE2D3-226ENST00000508635 PZPP20742 1482 aa5.34□□□□□ -1.55
UBE2D3-226ENST00000508635 PLA2R1Q13018 1463 aa5.34□□□□□ -1.55
UBE2D3-226ENST00000508635 SHANK2Q9UPX8 1470 aa5.34□□□□□ -1.55
UBE2D3-226ENST00000508635 DAPK1P53355 1430 aa5.34□□□□□ -1.55
UBE2D3-226ENST00000508635 FGD6Q6ZV73 1430 aa5.34□□□□□ -1.55
UBE2D3-226ENST00000508635 PRPF40AO75400 957 aaKnown RBP5.34□□□□□ -1.55
UBE2D3-226ENST00000508635 ESRRAP11474 423 aaPredicted RBP5.34□□□□□ -1.55
UBE2D3-226ENST00000508635 ZNF157P51786 506 aaPredicted RBP5.34□□□□□ -1.55
UBE2D3-226ENST00000508635 NLRP12P59046 1061 aa5.34□□□□□ -1.55
UBE2D3-226ENST00000508635 JAG1P78504 1218 aa5.34□□□□□ -1.55
UBE2D3-226ENST00000508635 PCDH1Q08174 1060 aa5.34□□□□□ -1.55
UBE2D3-226ENST00000508635 COL19A1Q14993 1142 aa5.34□□□□□ -1.55
UBE2D3-226ENST00000508635 ZNF423Q2M1K9 1284 aa5.34□□□□□ -1.55
UBE2D3-226ENST00000508635 DTHD1Q6ZMT9 781 aa5.34□□□□□ -1.55
UBE2D3-226ENST00000508635 SLC51AQ86UW1 340 aa5.34□□□□□ -1.55
UBE2D3-226ENST00000508635 FAM161BQ96MY7 647 aa5.34□□□□□ -1.55
UBE2D3-226ENST00000508635 SEC31BQ9NQW1 1179 aa5.34□□□□□ -1.55
UBE2D3-226ENST00000508635 KCNK4Q9NYG8 393 aa5.34□□□□□ -1.55
UBE2D3-226ENST00000508635 PARP2Q9UGN5 583 aa5.34□□□□□ -1.55
UBE2D3-226ENST00000508635 USP21Q9UK80 565 aa5.34□□□□□ -1.55
UBE2D3-226ENST00000508635 SPG7Q9UQ90 795 aa5.34□□□□□ -1.55
UBE2D3-226ENST00000508635 AKAP2Q9Y2D5 859 aa5.34□□□□□ -1.55
UBE2D3-226ENST00000508635 ZNF142P52746 1687 aaPredicted RBP5.34□□□□□ -1.56
UBE2D3-226ENST00000508635 RNF17Q9BXT8 1623 aaKnown RBP5.34□□□□□ -1.56
UBE2D3-226ENST00000508635 EIF2AK4Q9P2K8 1649 aaKnown RBP5.34□□□□□ -1.56
UBE2D3-226ENST00000508635 CEP170BQ9Y4F5 1589 aaPredicted RBP5.33□□□□□ -1.56
UBE2D3-226ENST00000508635 DUOX2Q9NRD8 1548 aa5.33□□□□□ -1.56
UBE2D3-226ENST00000508635 A2ML1A8K2U0 1454 aa5.33□□□□□ -1.56
UBE2D3-226ENST00000508635 TNRQ92752 1358 aa5.33□□□□□ -1.56
UBE2D3-226ENST00000508635 DLL1O00548 723 aa5.33□□□□□ -1.56
UBE2D3-226ENST00000508635 ERCC3P19447 782 aa5.33□□□□□ -1.56
UBE2D3-226ENST00000508635 CD68P34810 354 aaPredicted RBP5.33□□□□□ -1.56
UBE2D3-226ENST00000508635 ARL4DP49703 201 aa5.33□□□□□ -1.56
UBE2D3-226ENST00000508635 PIP4K2BP78356 416 aa5.33□□□□□ -1.56
UBE2D3-226ENST00000508635 NRG1Q02297 640 aaPredicted RBP5.33□□□□□ -1.56
UBE2D3-226ENST00000508635 GSTM4Q03013 218 aa5.33□□□□□ -1.56
UBE2D3-226ENST00000508635 C19orf57Q0VDD7 668 aa5.33□□□□□ -1.56
UBE2D3-226ENST00000508635 ADGRE1Q14246 886 aa5.33□□□□□ -1.56
UBE2D3-226ENST00000508635 PRPF40BQ6NWY9 871 aaKnown RBP5.33□□□□□ -1.56
UBE2D3-226ENST00000508635 FBXO33Q7Z6M2 555 aa5.33□□□□□ -1.56
UBE2D3-226ENST00000508635 TXNRD3Q86VQ6 643 aa5.33□□□□□ -1.56
UBE2D3-226ENST00000508635 BCL2L13Q9BXK5 485 aa5.33□□□□□ -1.56
UBE2D3-226ENST00000508635 CLEC4MQ9H2X3 399 aaPredicted RBP5.33□□□□□ -1.56
UBE2D3-226ENST00000508635 ZNF576Q9H609 170 aa5.33□□□□□ -1.56
UBE2D3-226ENST00000508635 RRP7BPQ9NSQ0 103 aa5.33□□□□□ -1.56
UBE2D3-226ENST00000508635 DNMT1P26358 1616 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms