RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 TFCP2L1Q9NZI6 479 aa9.25□□□□□ -0.93
CDC42-205ENST00000498236 RAD50Q92878 1312 aa9.25□□□□□ -0.93
CDC42-205ENST00000498236 ZC3H4Q9UPT8 1303 aaKnown RBP9.25□□□□□ -0.93
CDC42-205ENST00000498236 ARAP2Q8WZ64 1704 aa9.25□□□□□ -0.93
CDC42-205ENST00000498236 KLRG2A4D1S0 409 aaPredicted RBP9.24□□□□□ -0.93
CDC42-205ENST00000498236 MAP4K4O95819 1239 aaPredicted RBP9.24□□□□□ -0.93
CDC42-205ENST00000498236 RPS8P62241 208 aaKnown RBP9.24□□□□□ -0.93
CDC42-205ENST00000498236 CRY2Q49AN0 593 aa9.24□□□□□ -0.93
CDC42-205ENST00000498236 PRR5LQ6MZQ0 368 aa9.24□□□□□ -0.93
CDC42-205ENST00000498236 KBTBD3Q8NAB2 608 aa9.24□□□□□ -0.93
CDC42-205ENST00000498236 KIF2CQ99661 725 aa9.24□□□□□ -0.93
CDC42-205ENST00000498236 ALG2Q9H553 416 aa9.24□□□□□ -0.93
CDC42-205ENST00000498236 PRDM9Q9NQV7 894 aa9.24□□□□□ -0.93
CDC42-205ENST00000498236 DIAPH3Q9NSV4 1193 aa9.24□□□□□ -0.93
CDC42-205ENST00000498236 QSER1Q2KHR3 1735 aa9.23□□□□□ -0.93
CDC42-205ENST00000498236 NRXN2Q9P2S2 1712 aa9.23□□□□□ -0.93
CDC42-205ENST00000498236 CASZ1Q86V15 1759 aa9.23□□□□□ -0.93
CDC42-205ENST00000498236 POLRMTO00411 1230 aaKnown RBP9.23□□□□□ -0.93
CDC42-205ENST00000498236 SERPINB2P05120 415 aa9.23□□□□□ -0.93
CDC42-205ENST00000498236 IFIT1P09914 478 aaKnown RBP9.23□□□□□ -0.93
CDC42-205ENST00000498236 UQCRFS1P1P0C7P4 283 aa9.23□□□□□ -0.93
CDC42-205ENST00000498236 SLC5A1P13866 664 aa9.23□□□□□ -0.93
CDC42-205ENST00000498236 ARID4AP29374 1257 aaPredicted RBP9.23□□□□□ -0.93
CDC42-205ENST00000498236 ADORA1P30542 326 aa9.23□□□□□ -0.93
CDC42-205ENST00000498236 ANAPC15P60006 121 aa9.23□□□□□ -0.93
CDC42-205ENST00000498236 ST5P78524 1137 aa9.23□□□□□ -0.93
CDC42-205ENST00000498236 CHRNDQ07001 517 aa9.23□□□□□ -0.93
CDC42-205ENST00000498236 KCNH2Q12809 1159 aa9.23□□□□□ -0.93
CDC42-205ENST00000498236 NR1H3Q13133 447 aa9.23□□□□□ -0.93
CDC42-205ENST00000498236 BECN1Q14457 450 aa9.23□□□□□ -0.93
CDC42-205ENST00000498236 TTC39AQ5SRH9 613 aa9.23□□□□□ -0.93
CDC42-205ENST00000498236 GORABQ5T7V8 394 aa9.23□□□□□ -0.93
CDC42-205ENST00000498236 COL23A1Q86Y22 540 aaPredicted RBP9.23□□□□□ -0.93
CDC42-205ENST00000498236 ARMC2Q8NEN0 867 aa9.23□□□□□ -0.93
CDC42-205ENST00000498236 FSD1Q9BTV5 496 aa9.23□□□□□ -0.93
CDC42-205ENST00000498236 PAG1Q9NWQ8 432 aa9.23□□□□□ -0.93
CDC42-205ENST00000498236 PNPLA7Q6ZV29 1317 aa9.23□□□□□ -0.93
CDC42-205ENST00000498236 TNRC6CQ9HCJ0 1690 aaKnown RBP9.23□□□□□ -0.93
CDC42-205ENST00000498236 ZBBXA8MT70 800 aa9.22□□□□□ -0.93
CDC42-205ENST00000498236 HOXA10P31260 410 aaPredicted RBP9.22□□□□□ -0.93
CDC42-205ENST00000498236 DDR1Q08345 913 aa9.22□□□□□ -0.93
CDC42-205ENST00000498236 UBE4AQ14139 1066 aa9.22□□□□□ -0.93
CDC42-205ENST00000498236 LRRFIP1Q32MZ4 808 aaKnown RBP9.22□□□□□ -0.93
CDC42-205ENST00000498236 DDX46Q7L014 1031 aaKnown RBP9.22□□□□□ -0.93
CDC42-205ENST00000498236 CELF1Q92879 486 aaKnown RBP9.22□□□□□ -0.93
CDC42-205ENST00000498236 SNX21Q969T3 373 aa9.22□□□□□ -0.93
CDC42-205ENST00000498236 ANKRD2Q9GZV1 360 aa9.22□□□□□ -0.93
CDC42-205ENST00000498236 LSG1Q9H089 658 aaKnown RBP9.22□□□□□ -0.93
CDC42-205ENST00000498236 MINPP1Q9UNW1 487 aa9.22□□□□□ -0.93
CDC42-205ENST00000498236 COL4A1P02462 1669 aa9.22□□□□□ -0.93
CDC42-205ENST00000498236 MED23Q9ULK4 1368 aa9.22□□□□□ -0.93
CDC42-205ENST00000498236 NPHP1O15259 732 aa9.21□□□□□ -0.94
CDC42-205ENST00000498236 ZFYP08048 801 aaPredicted RBP9.21□□□□□ -0.94
CDC42-205ENST00000498236 FBXO45P0C2W1 286 aa9.21□□□□□ -0.94
CDC42-205ENST00000498236 MCCP23508 829 aa9.21□□□□□ -0.94
CDC42-205ENST00000498236 BAG6P46379 1132 aa9.21□□□□□ -0.94
CDC42-205ENST00000498236 SEMA3FQ13275 785 aa9.21□□□□□ -0.94
CDC42-205ENST00000498236 NMIQ13287 307 aaPredicted RBP9.21□□□□□ -0.94
CDC42-205ENST00000498236 GRAPQ13588 217 aa9.21□□□□□ -0.94
CDC42-205ENST00000498236 RABEP1Q15276 862 aa9.21□□□□□ -0.94
CDC42-205ENST00000498236 EZH2Q15910 746 aaKnown RBP9.21□□□□□ -0.94
CDC42-205ENST00000498236 SLC15A2Q16348 729 aa9.21□□□□□ -0.94
CDC42-205ENST00000498236 CCDC102BQ68D86 513 aa9.21□□□□□ -0.94
CDC42-205ENST00000498236 CWC27Q6UX04 472 aaKnown RBP9.21□□□□□ -0.94
CDC42-205ENST00000498236 KIAA1211Q6ZU35 1233 aa9.21□□□□□ -0.94
CDC42-205ENST00000498236 CCDC125Q86Z20 511 aa9.21□□□□□ -0.94
CDC42-205ENST00000498236 GRAPLQ8TC17 118 aaPredicted RBP9.21□□□□□ -0.94
CDC42-205ENST00000498236 DNAJC2Q99543 621 aaKnown RBP9.21□□□□□ -0.94
CDC42-205ENST00000498236 SLC6A16Q9GZN6 736 aa9.21□□□□□ -0.94
CDC42-205ENST00000498236 IL25Q9H293 177 aa9.21□□□□□ -0.94
CDC42-205ENST00000498236 ANO2Q9NQ90 1003 aa9.21□□□□□ -0.94
CDC42-205ENST00000498236 ZNF804BA4D1E1 1349 aa9.21□□□□□ -0.94
CDC42-205ENST00000498236 A0A1B0GUL6 1792 aa9.2□□□□□ -0.94
CDC42-205ENST00000498236 GOLIM4O00461 696 aa9.2□□□□□ -0.94
CDC42-205ENST00000498236 TAF5LO75529 589 aa9.2□□□□□ -0.94
CDC42-205ENST00000498236 HSPA4P34932 840 aa9.2□□□□□ -0.94
CDC42-205ENST00000498236 SLC19A1P41440 591 aa9.2□□□□□ -0.94
CDC42-205ENST00000498236 MCAMP43121 646 aa9.2□□□□□ -0.94
CDC42-205ENST00000498236 SF3B2Q13435 895 aaKnown RBP9.2□□□□□ -0.94
CDC42-205ENST00000498236 TTF1Q15361 905 aaPredicted RBP9.2□□□□□ -0.94
CDC42-205ENST00000498236 ZMYM1Q5SVZ6 1142 aa9.2□□□□□ -0.94
CDC42-205ENST00000498236 TMC4Q7Z404 712 aa9.2□□□□□ -0.94
CDC42-205ENST00000498236 GPKOWQ92917 476 aaPredicted RBP eCLIP9.2□□□□□ -0.942e-6■■□□□ 13.7
CDC42-205ENST00000498236 KCNB2Q92953 911 aa9.2□□□□□ -0.94
CDC42-205ENST00000498236 EDC3Q96F86 508 aaKnown RBP9.2□□□□□ -0.94
CDC42-205ENST00000498236 FAM227BQ96M60 508 aa9.2□□□□□ -0.94
CDC42-205ENST00000498236 CRAMP1Q96RY5 1269 aa9.2□□□□□ -0.94
CDC42-205ENST00000498236 BRIP1Q9BX63 1249 aa9.2□□□□□ -0.94
CDC42-205ENST00000498236 HELLSQ9NRZ9 838 aa9.2□□□□□ -0.94
CDC42-205ENST00000498236 STK32BQ9NY57 414 aa9.2□□□□□ -0.94
CDC42-205ENST00000498236 AKAP11Q9UKA4 1901 aa9.19□□□□□ -0.94
CDC42-205ENST00000498236 A0A0D9SFI3 127 aa9.19□□□□□ -0.94
CDC42-205ENST00000498236 RNF113AO15541 343 aaKnown RBP9.19□□□□□ -0.94
CDC42-205ENST00000498236 BBOX1O75936 387 aa9.19□□□□□ -0.94
CDC42-205ENST00000498236 PHKA1P46020 1223 aa9.19□□□□□ -0.94
CDC42-205ENST00000498236 FKBP4Q02790 459 aaKnown RBP eCLIP9.19□□□□□ -0.94
CDC42-205ENST00000498236 SCARF1Q14162 830 aa9.19□□□□□ -0.94
CDC42-205ENST00000498236 MCMDC2Q4G0Z9 681 aa9.19□□□□□ -0.94
CDC42-205ENST00000498236 C15orf52Q6ZUT6 534 aaKnown RBP9.19□□□□□ -0.94
CDC42-205ENST00000498236 RPGRQ92834 1020 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms