RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 TM4SF1P30408 202 aa17.18■□□□□ 0.34
CHTOP-206ENST00000495554 RPS8P62241 208 aaKnown RBP17.18■□□□□ 0.34
CHTOP-206ENST00000495554 KIF23Q02241 960 aaPredicted RBP17.18■□□□□ 0.34
CHTOP-206ENST00000495554 LCORLQ8N3X6 602 aa17.18■□□□□ 0.34
CHTOP-206ENST00000495554 NLRP3Q96P20 1036 aa17.18■□□□□ 0.34
CHTOP-206ENST00000495554 KRT23Q9C075 422 aa17.18■□□□□ 0.34
CHTOP-206ENST00000495554 LY9Q9HBG7 655 aa17.18■□□□□ 0.34
CHTOP-206ENST00000495554 CLIC4Q9Y696 253 aa17.18■□□□□ 0.34
CHTOP-206ENST00000495554 AFF2P51816 1311 aa17.18■□□□□ 0.34
CHTOP-206ENST00000495554 NOLC1Q14978 699 aaKnown RBP eCLIP17.18■□□□□ 0.34
CHTOP-206ENST00000495554 TMEM67Q5HYA8 995 aa17.18■□□□□ 0.34
CHTOP-206ENST00000495554 AKNAD1Q5T1N1 836 aa17.18■□□□□ 0.34
CHTOP-206ENST00000495554 NFXL1Q6ZNB6 911 aa17.18■□□□□ 0.34
CHTOP-206ENST00000495554 FMR1NBQ8N0W7 255 aaPredicted RBP17.18■□□□□ 0.34
CHTOP-206ENST00000495554 SPC24Q8NBT2 197 aa17.18■□□□□ 0.34
CHTOP-206ENST00000495554 ALG1Q9BT22 464 aa17.18■□□□□ 0.34
CHTOP-206ENST00000495554 SPTLC2O15270 562 aa17.17■□□□□ 0.34
CHTOP-206ENST00000495554 LY75O60449 1722 aa17.17■□□□□ 0.34
CHTOP-206ENST00000495554 TPTE2Q6XPS3 522 aa17.17■□□□□ 0.34
CHTOP-206ENST00000495554 ADGRA1Q86SQ6 560 aa17.17■□□□□ 0.34
CHTOP-206ENST00000495554 TAF1LQ8IZX4 1826 aa17.17■□□□□ 0.34
CHTOP-206ENST00000495554 CNPY4Q8N129 248 aa17.17■□□□□ 0.34
CHTOP-206ENST00000495554 GJB4Q9NTQ9 266 aa17.17■□□□□ 0.34
CHTOP-206ENST00000495554 ZSWIM5Q9P217 1185 aa17.17■□□□□ 0.34
CHTOP-206ENST00000495554 LRP2BPQ9P2M1 347 aa17.17■□□□□ 0.34
CHTOP-206ENST00000495554 SBF2Q86WG5 1849 aa17.17■□□□□ 0.34
CHTOP-206ENST00000495554 COL1A1P02452 1464 aaPredicted RBP17.17■□□□□ 0.34
CHTOP-206ENST00000495554 HSPA1LP34931 641 aa17.17■□□□□ 0.34
CHTOP-206ENST00000495554 MFSD6Q6ZSS7 791 aa17.17■□□□□ 0.34
CHTOP-206ENST00000495554 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.17■□□□□ 0.34
CHTOP-206ENST00000495554 MICU3Q86XE3 530 aa17.17■□□□□ 0.34
CHTOP-206ENST00000495554 TRIM5Q9C035 493 aa17.17■□□□□ 0.34
CHTOP-206ENST00000495554 SENP2Q9HC62 589 aa17.17■□□□□ 0.34
CHTOP-206ENST00000495554 COL24A1Q17RW2 1714 aa17.16■□□□□ 0.34
CHTOP-206ENST00000495554 KIF28PB7ZC32 967 aa17.16■□□□□ 0.34
CHTOP-206ENST00000495554 CDC27P30260 824 aa17.16■□□□□ 0.34
CHTOP-206ENST00000495554 CTDSPL2Q05D32 466 aa17.16■□□□□ 0.34
CHTOP-206ENST00000495554 PLA2G4DQ86XP0 818 aa17.16■□□□□ 0.34
CHTOP-206ENST00000495554 LRRC4BQ9NT99 713 aa17.16■□□□□ 0.34
CHTOP-206ENST00000495554 C4AP0C0L4 1744 aa17.16■□□□□ 0.34
CHTOP-206ENST00000495554 C4BP0C0L5 1744 aa17.16■□□□□ 0.34
CHTOP-206ENST00000495554 IFIT3O14879 490 aaKnown RBP17.16■□□□□ 0.34
CHTOP-206ENST00000495554 TDO2P48775 406 aa17.16■□□□□ 0.34
CHTOP-206ENST00000495554 MEX3CQ5U5Q3 659 aaKnown RBP17.16■□□□□ 0.34
CHTOP-206ENST00000495554 ANO1Q5XXA6 986 aa17.16■□□□□ 0.34
CHTOP-206ENST00000495554 FBXO33Q7Z6M2 555 aa17.16■□□□□ 0.34
CHTOP-206ENST00000495554 SEPT12Q8IYM1 358 aa17.16■□□□□ 0.34
CHTOP-206ENST00000495554 MIGA1Q8NAN2 632 aa17.16■□□□□ 0.34
CHTOP-206ENST00000495554 SPTLC3Q9NUV7 552 aa17.16■□□□□ 0.34
CHTOP-206ENST00000495554 ANO10Q9NW15 660 aa17.16■□□□□ 0.34
CHTOP-206ENST00000495554 SLC12A7Q9Y666 1083 aa17.16■□□□□ 0.34
CHTOP-206ENST00000495554 SLC4A4Q9Y6R1 1079 aa17.16■□□□□ 0.34
CHTOP-206ENST00000495554 GOLGA8AA7E2F4 631 aa17.15■□□□□ 0.34
CHTOP-206ENST00000495554 GOLGA6L19H0YKK7 550 aa17.15■□□□□ 0.34
CHTOP-206ENST00000495554 RXRAP19793 462 aa17.15■□□□□ 0.34
CHTOP-206ENST00000495554 KLRK1P26718 216 aa17.15■□□□□ 0.34
CHTOP-206ENST00000495554 IARSP41252 1262 aaKnown RBP17.15■□□□□ 0.34
CHTOP-206ENST00000495554 ZNF75DP51815 510 aa17.15■□□□□ 0.34
CHTOP-206ENST00000495554 IQCB1Q15051 598 aa17.15■□□□□ 0.34
CHTOP-206ENST00000495554 NTRK3Q16288 839 aa17.15■□□□□ 0.34
CHTOP-206ENST00000495554 CERKQ8TCT0 537 aa17.15■□□□□ 0.34
CHTOP-206ENST00000495554 STAG1Q8WVM7 1258 aa17.15■□□□□ 0.34
CHTOP-206ENST00000495554 SDF4Q9BRK5 362 aa17.15■□□□□ 0.34
CHTOP-206ENST00000495554 KCNF1Q9H3M0 494 aa17.15■□□□□ 0.34
CHTOP-206ENST00000495554 GNL3LQ9NVN8 582 aaKnown RBP17.15■□□□□ 0.34
CHTOP-206ENST00000495554 ABCF2Q9UG63 623 aa17.15■□□□□ 0.34
CHTOP-206ENST00000495554 A0A1B0GVL5 298 aa17.14■□□□□ 0.33
CHTOP-206ENST00000495554 CCDC69A6NI79 296 aa17.14■□□□□ 0.33
CHTOP-206ENST00000495554 CYP7A1P22680 504 aa17.14■□□□□ 0.33
CHTOP-206ENST00000495554 NDUFA8P51970 172 aa17.14■□□□□ 0.33
CHTOP-206ENST00000495554 KRT40Q6A162 431 aa17.14■□□□□ 0.33
CHTOP-206ENST00000495554 FAM196AQ6ZSG2 479 aa17.14■□□□□ 0.33
CHTOP-206ENST00000495554 C11orf57Q6ZUT1 292 aaPredicted RBP17.14■□□□□ 0.33
CHTOP-206ENST00000495554 ZNF384Q8TF68 577 aa17.14■□□□□ 0.33
CHTOP-206ENST00000495554 MTA3Q9BTC8 594 aa17.14■□□□□ 0.33
CHTOP-206ENST00000495554 SART3Q15020 963 aaKnown RBP17.14■□□□□ 0.33
CHTOP-206ENST00000495554 CAVIN4Q5BKX8 364 aa17.14■□□□□ 0.33
CHTOP-206ENST00000495554 TRAPPC3LQ5T215 181 aa17.14■□□□□ 0.33
CHTOP-206ENST00000495554 VPS37DQ86XT2 251 aa17.14■□□□□ 0.33
CHTOP-206ENST00000495554 KIAA1524Q8TCG1 905 aa17.14■□□□□ 0.33
CHTOP-206ENST00000495554 PHKBQ93100 1093 aa17.14■□□□□ 0.33
CHTOP-206ENST00000495554 AIFM3Q96NN9 605 aa17.14■□□□□ 0.33
CHTOP-206ENST00000495554 FAM217BQ9NTX9 383 aaPredicted RBP17.14■□□□□ 0.33
CHTOP-206ENST00000495554 TRIM29Q14134 588 aa17.13■□□□□ 0.33
CHTOP-206ENST00000495554 SLC39A14Q15043 492 aa17.13■□□□□ 0.33
CHTOP-206ENST00000495554 DNTTIP2Q5QJE6 756 aaKnown RBP17.13■□□□□ 0.33
CHTOP-206ENST00000495554 SARM1Q6SZW1 724 aa17.13■□□□□ 0.33
CHTOP-206ENST00000495554 CCDC144CPQ8IYA2 1237 aa17.13■□□□□ 0.33
CHTOP-206ENST00000495554 RNF41Q9H4P4 317 aaPredicted RBP17.13■□□□□ 0.33
CHTOP-206ENST00000495554 STK36Q9NRP7 1315 aa17.13■□□□□ 0.33
CHTOP-206ENST00000495554 TIAM2Q8IVF5 1701 aa17.13■□□□□ 0.33
CHTOP-206ENST00000495554 RFC4P35249 363 aa17.13■□□□□ 0.33
CHTOP-206ENST00000495554 DRC7Q8IY82 874 aa17.13■□□□□ 0.33
CHTOP-206ENST00000495554 NAT10Q9H0A0 1025 aaKnown RBP17.13■□□□□ 0.33
CHTOP-206ENST00000495554 BECN2A8MW95 431 aa17.12■□□□□ 0.33
CHTOP-206ENST00000495554 CMA1P23946 247 aa17.12■□□□□ 0.33
CHTOP-206ENST00000495554 GNL2Q13823 731 aaKnown RBP17.12■□□□□ 0.33
CHTOP-206ENST00000495554 CEP57L1Q8IYX8 460 aa17.12■□□□□ 0.33
CHTOP-206ENST00000495554 RIOK1Q9BRS2 568 aaKnown RBP17.12■□□□□ 0.33
CHTOP-206ENST00000495554 MYL10Q9BUA6 226 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms