RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 PICALMQ13492 652 aa19.44■□□□□ 0.7
CTDSP1-209ENST00000488627 SH3RF3Q8TEJ3 882 aaPredicted RBP19.44■□□□□ 0.7
CTDSP1-209ENST00000488627 ZKSCAN4Q969J2 545 aaPredicted RBP19.44■□□□□ 0.7
CTDSP1-209ENST00000488627 WRNIP1Q96S55 665 aa19.44■□□□□ 0.7
CTDSP1-209ENST00000488627 ZNF341Q9BYN7 854 aa19.44■□□□□ 0.7
CTDSP1-209ENST00000488627 AATFQ9NY61 560 aaKnown RBP eCLIP19.44■□□□□ 0.7
CTDSP1-209ENST00000488627 SNCAIPQ9Y6H5 919 aa19.44■□□□□ 0.7
CTDSP1-209ENST00000488627 SLURP2P0DP57 97 aa19.43■□□□□ 0.7
CTDSP1-209ENST00000488627 INPP5BP32019 993 aa19.43■□□□□ 0.7
CTDSP1-209ENST00000488627 OPTNQ96CV9 577 aa19.43■□□□□ 0.7
CTDSP1-209ENST00000488627 MS4A4AQ96JQ5 239 aa19.43■□□□□ 0.7
CTDSP1-209ENST00000488627 MYH2Q9UKX2 1941 aa19.43■□□□□ 0.7
CTDSP1-209ENST00000488627 TESPA1A2RU30 521 aaPredicted RBP19.42■□□□□ 0.7
CTDSP1-209ENST00000488627 MANSC4A6NHS7 340 aaPredicted RBP19.42■□□□□ 0.7
CTDSP1-209ENST00000488627 SPDYE5A6NIY4 337 aa19.42■□□□□ 0.7
CTDSP1-209ENST00000488627 PHF20L1A8MW92 1017 aa19.42■□□□□ 0.7
CTDSP1-209ENST00000488627 BAG3O95817 575 aa19.42■□□□□ 0.7
CTDSP1-209ENST00000488627 INHBEP58166 350 aa19.42■□□□□ 0.7
CTDSP1-209ENST00000488627 SREBF2Q12772 1141 aa19.42■□□□□ 0.7
CTDSP1-209ENST00000488627 MAP3K12Q12852 859 aa19.42■□□□□ 0.7
CTDSP1-209ENST00000488627 TEX11Q8IYF3 940 aa19.42■□□□□ 0.7
CTDSP1-209ENST00000488627 MAGEB6Q8N7X4 407 aa19.42■□□□□ 0.7
CTDSP1-209ENST00000488627 EDC3Q96F86 508 aaKnown RBP19.42■□□□□ 0.7
CTDSP1-209ENST00000488627 BOLA2Q9H3K6 86 aa19.42■□□□□ 0.7
CTDSP1-209ENST00000488627 CSADQ9Y600 493 aa19.42■□□□□ 0.7
CTDSP1-209ENST00000488627 GOLIM4O00461 696 aa19.41■□□□□ 0.7
CTDSP1-209ENST00000488627 PLCG2P16885 1265 aa19.41■□□□□ 0.7
CTDSP1-209ENST00000488627 DYNLL1P63167 89 aaKnown RBP19.41■□□□□ 0.7
CTDSP1-209ENST00000488627 TTF1Q15361 905 aaPredicted RBP19.41■□□□□ 0.7
CTDSP1-209ENST00000488627 TMED8Q6PL24 325 aaPredicted RBP19.41■□□□□ 0.7
CTDSP1-209ENST00000488627 ZSCAN29Q8IWY8 852 aaPredicted RBP19.41■□□□□ 0.7
CTDSP1-209ENST00000488627 DNAJC2Q99543 621 aaKnown RBP19.41■□□□□ 0.7
CTDSP1-209ENST00000488627 HAUS7Q99871 368 aa19.41■□□□□ 0.7
CTDSP1-209ENST00000488627 OSBPL5Q9H0X9 879 aaPredicted RBP19.41■□□□□ 0.7
CTDSP1-209ENST00000488627 ERO1BQ86YB8 467 aa19.4■□□□□ 0.7
CTDSP1-209ENST00000488627 IFNL1Q8IU54 200 aa19.4■□□□□ 0.7
CTDSP1-209ENST00000488627 PTPN18Q99952 460 aa19.4■□□□□ 0.7
CTDSP1-209ENST00000488627 NOL10Q9BSC4 688 aaKnown RBP19.4■□□□□ 0.7
CTDSP1-209ENST00000488627 SUPT16HQ9Y5B9 1047 aaKnown RBP19.4■□□□□ 0.7
CTDSP1-209ENST00000488627 IGF2BP3O00425 579 aaKnown RBP eCLIP19.39■□□□□ 0.69
CTDSP1-209ENST00000488627 TBC1D12O60347 775 aa19.39■□□□□ 0.69
CTDSP1-209ENST00000488627 HDAC1Q13547 482 aaPredicted RBP19.39■□□□□ 0.69
CTDSP1-209ENST00000488627 AAMPQ13685 434 aa19.39■□□□□ 0.69
CTDSP1-209ENST00000488627 NOL9Q5SY16 702 aaKnown RBP19.39■□□□□ 0.69
CTDSP1-209ENST00000488627 TNS4Q8IZW8 715 aa19.39■□□□□ 0.69
CTDSP1-209ENST00000488627 MIGA1Q8NAN2 632 aa19.39■□□□□ 0.69
CTDSP1-209ENST00000488627 TGFBRAP1Q8WUH2 860 aa19.39■□□□□ 0.69
CTDSP1-209ENST00000488627 CFHR5Q9BXR6 569 aa19.39■□□□□ 0.69
CTDSP1-209ENST00000488627 TCRBV5S4A2TA0A5A2 114 aa19.38■□□□□ 0.69
CTDSP1-209ENST00000488627 TBC1D8O95759 1140 aa19.38■□□□□ 0.69
CTDSP1-209ENST00000488627 COL2A1P02458 1487 aaPredicted RBP19.38■□□□□ 0.69
CTDSP1-209ENST00000488627 PDE6AP16499 860 aa19.38■□□□□ 0.69
CTDSP1-209ENST00000488627 SLC9C2Q5TAH2 1124 aa19.38■□□□□ 0.69
CTDSP1-209ENST00000488627 OTUD5Q96G74 571 aa19.38■□□□□ 0.69
CTDSP1-209ENST00000488627 RIOK1Q9BRS2 568 aaKnown RBP19.38■□□□□ 0.69
CTDSP1-209ENST00000488627 R3HDMLQ9H3Y0 253 aa19.38■□□□□ 0.69
CTDSP1-209ENST00000488627 ECHDC1Q9NTX5 307 aa19.38■□□□□ 0.69
CTDSP1-209ENST00000488627 PAG1Q9NWQ8 432 aa19.38■□□□□ 0.69
CTDSP1-209ENST00000488627 FLT1P17948 1338 aa19.37■□□□□ 0.69
CTDSP1-209ENST00000488627 IRF6O14896 467 aa19.37■□□□□ 0.69
CTDSP1-209ENST00000488627 MAPKAPK5Q8IW41 473 aa19.37■□□□□ 0.69
CTDSP1-209ENST00000488627 EXOC6Q8TAG9 804 aa19.37■□□□□ 0.69
CTDSP1-209ENST00000488627 BRI3BPQ8WY22 251 aa19.37■□□□□ 0.69
CTDSP1-209ENST00000488627 GTF2A2P52657 109 aa19.36■□□□□ 0.69
CTDSP1-209ENST00000488627 PPATQ06203 517 aa19.36■□□□□ 0.69
CTDSP1-209ENST00000488627 PPIL2Q13356 520 aa19.36■□□□□ 0.69
CTDSP1-209ENST00000488627 ZNF532Q9HCE3 1301 aa19.35■□□□□ 0.69
CTDSP1-209ENST00000488627 FAM196BA6NMK8 535 aa19.35■□□□□ 0.69
CTDSP1-209ENST00000488627 ALDH1A1P00352 501 aa19.35■□□□□ 0.69
CTDSP1-209ENST00000488627 SLFNL1Q499Z3 407 aa19.35■□□□□ 0.69
CTDSP1-209ENST00000488627 NOM1Q5C9Z4 860 aaKnown RBP19.35■□□□□ 0.69
CTDSP1-209ENST00000488627 IFFO2Q5TF58 517 aa19.35■□□□□ 0.69
CTDSP1-209ENST00000488627 TSHZ3Q63HK5 1081 aa19.35■□□□□ 0.69
CTDSP1-209ENST00000488627 METTL16Q86W50 562 aaKnown RBP19.35■□□□□ 0.69
CTDSP1-209ENST00000488627 CERS3Q8IU89 383 aa19.35■□□□□ 0.69
CTDSP1-209ENST00000488627 OTUD7AQ8TE49 926 aaPredicted RBP19.35■□□□□ 0.69
CTDSP1-209ENST00000488627 DHX36Q9H2U1 1008 aaKnown RBP19.35■□□□□ 0.69
CTDSP1-209ENST00000488627 PI4KBQ9UBF8 816 aa19.35■□□□□ 0.69
CTDSP1-209ENST00000488627 OTOFQ9HC10 1997 aa19.34■□□□□ 0.69
CTDSP1-209ENST00000488627 CTNND1O60716 968 aaKnown RBP19.34■□□□□ 0.69
CTDSP1-209ENST00000488627 CHGBP05060 677 aa19.34■□□□□ 0.69
CTDSP1-209ENST00000488627 ADD2P35612 726 aa19.34■□□□□ 0.69
CTDSP1-209ENST00000488627 RRP1BQ14684 758 aaKnown RBP19.34■□□□□ 0.69
CTDSP1-209ENST00000488627 SCYL3Q8IZE3 742 aa19.34■□□□□ 0.69
CTDSP1-209ENST00000488627 PALD1Q9ULE6 856 aa19.34■□□□□ 0.69
CTDSP1-209ENST00000488627 KCNH4Q9UQ05 1017 aa19.34■□□□□ 0.69
CTDSP1-209ENST00000488627 CCL15-CCL14A0A0B4J2E2 113 aa19.33■□□□□ 0.68
CTDSP1-209ENST00000488627 MAGEB6P1A0A0J9YX57 407 aa19.33■□□□□ 0.68
CTDSP1-209ENST00000488627 GPR25O00155 361 aa19.33■□□□□ 0.68
CTDSP1-209ENST00000488627 CCL15Q16663 113 aa19.33■□□□□ 0.68
CTDSP1-209ENST00000488627 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.33■□□□□ 0.685e-6■□□□□ 10.3
CTDSP1-209ENST00000488627 HERC5Q9UII4 1024 aaKnown RBP19.33■□□□□ 0.68
CTDSP1-209ENST00000488627 SALL3Q9BXA9 1300 aa19.32■□□□□ 0.68
CTDSP1-209ENST00000488627 CETPP11597 493 aa19.32■□□□□ 0.68
CTDSP1-209ENST00000488627 PTPRAP18433 802 aa19.32■□□□□ 0.68
CTDSP1-209ENST00000488627 SNAPC2Q13487 334 aa19.32■□□□□ 0.68
CTDSP1-209ENST00000488627 MOGSQ13724 837 aa19.32■□□□□ 0.68
CTDSP1-209ENST00000488627 FOXP4Q8IVH2 680 aaPredicted RBP19.32■□□□□ 0.68
CTDSP1-209ENST00000488627 FAM43AQ8N2R8 423 aa19.32■□□□□ 0.68
CTDSP1-209ENST00000488627 GCC1Q96CN9 775 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms