RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 SMARCA5O60264 1052 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-221ENST00000477561 WDHD1O75717 1129 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-221ENST00000477561 ZBTB48P10074 688 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-221ENST00000477561 INPP5BP32019 993 aa10.11□□□□□ -0.79
HDAC6-221ENST00000477561 RHBDL3P58872 404 aa10.11□□□□□ -0.79
HDAC6-221ENST00000477561 SREBF2Q12772 1141 aa10.11□□□□□ -0.79
HDAC6-221ENST00000477561 DCAF15Q66K64 600 aa10.11□□□□□ -0.79
HDAC6-221ENST00000477561 SH3BP5LQ7L8J4 393 aa10.11□□□□□ -0.79
HDAC6-221ENST00000477561 CLASRPQ8N2M8 674 aaKnown RBP10.11□□□□□ -0.79
HDAC6-221ENST00000477561 HOOK2Q96ED9 719 aa10.11□□□□□ -0.79
HDAC6-221ENST00000477561 OTUD5Q96G74 571 aa10.11□□□□□ -0.79
HDAC6-221ENST00000477561 IDI2Q9BXS1 227 aa10.11□□□□□ -0.79
HDAC6-221ENST00000477561 ZNF341Q9BYN7 854 aa10.11□□□□□ -0.79
HDAC6-221ENST00000477561 R3HDMLQ9H3Y0 253 aa10.11□□□□□ -0.79
HDAC6-221ENST00000477561 ANTXR1Q9H6X2 564 aa10.11□□□□□ -0.79
HDAC6-221ENST00000477561 AATFQ9NY61 560 aaKnown RBP eCLIP10.11□□□□□ -0.79
HDAC6-221ENST00000477561 DDTLA6NHG4 134 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-221ENST00000477561 IGF2BP3O00425 579 aaKnown RBP eCLIP10.1□□□□□ -0.79
HDAC6-221ENST00000477561 RAB11FIP3O75154 756 aa10.1□□□□□ -0.79
HDAC6-221ENST00000477561 ENTPD3O75355 529 aa10.1□□□□□ -0.79
HDAC6-221ENST00000477561 IDH1O75874 414 aaKnown RBP10.1□□□□□ -0.79
HDAC6-221ENST00000477561 IFIT2P09913 472 aaKnown RBP10.1□□□□□ -0.79
HDAC6-221ENST00000477561 ADGRA1Q86SQ6 560 aa10.1□□□□□ -0.79
HDAC6-221ENST00000477561 TEX11Q8IYF3 940 aa10.1□□□□□ -0.79
HDAC6-221ENST00000477561 SH3RF3Q8TEJ3 882 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-221ENST00000477561 NOL10Q9BSC4 688 aaKnown RBP10.1□□□□□ -0.79
HDAC6-221ENST00000477561 SNCAIPQ9Y6H5 919 aa10.1□□□□□ -0.79
HDAC6-221ENST00000477561 RPAP1Q9BWH6 1393 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-221ENST00000477561 OTOFQ9HC10 1997 aa10.09□□□□□ -0.79
HDAC6-221ENST00000477561 CYP7A1P22680 504 aa10.09□□□□□ -0.79
HDAC6-221ENST00000477561 INHBEP58166 350 aa10.09□□□□□ -0.79
HDAC6-221ENST00000477561 DYNLL1P63167 89 aaKnown RBP10.09□□□□□ -0.79
HDAC6-221ENST00000477561 IRX6P78412 446 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-221ENST00000477561 DGKZQ13574 1117 aa10.09□□□□□ -0.79
HDAC6-221ENST00000477561 IFNL1Q8IU54 200 aa10.09□□□□□ -0.79
HDAC6-221ENST00000477561 MAGEB6Q8N7X4 407 aa10.09□□□□□ -0.79
HDAC6-221ENST00000477561 CRBNQ96SW2 442 aa10.09□□□□□ -0.79
HDAC6-221ENST00000477561 DNAJC2Q99543 621 aaKnown RBP10.09□□□□□ -0.79
HDAC6-221ENST00000477561 PTPN18Q99952 460 aa10.09□□□□□ -0.79
HDAC6-221ENST00000477561 PCDHB15Q9Y5E8 787 aa10.09□□□□□ -0.79
HDAC6-221ENST00000477561 RFX7Q2KHR2 1363 aa10.09□□□□□ -0.79
HDAC6-221ENST00000477561 AKAP11Q9UKA4 1901 aa10.09□□□□□ -0.79
HDAC6-221ENST00000477561 CASP8AP2Q9UKL3 1982 aa10.08□□□□□ -0.8
HDAC6-221ENST00000477561 AK9Q5TCS8 1911 aa10.08□□□□□ -0.8
HDAC6-221ENST00000477561 CCL15-CCL14A0A0B4J2E2 113 aa10.08□□□□□ -0.8
HDAC6-221ENST00000477561 SPDYE5A6NIY4 337 aa10.08□□□□□ -0.8
HDAC6-221ENST00000477561 FAM196BA6NMK8 535 aa10.08□□□□□ -0.8
HDAC6-221ENST00000477561 BAG3O95817 575 aa10.08□□□□□ -0.8
HDAC6-221ENST00000477561 CCL15Q16663 113 aa10.08□□□□□ -0.8
HDAC6-221ENST00000477561 ERO1BQ86YB8 467 aa10.08□□□□□ -0.8
HDAC6-221ENST00000477561 MAPKAPK5Q8IW41 473 aa10.08□□□□□ -0.8
HDAC6-221ENST00000477561 MIGA1Q8NAN2 632 aa10.08□□□□□ -0.8
HDAC6-221ENST00000477561 TGFBRAP1Q8WUH2 860 aa10.08□□□□□ -0.8
HDAC6-221ENST00000477561 EDC3Q96F86 508 aaKnown RBP10.08□□□□□ -0.8
HDAC6-221ENST00000477561 MS4A4AQ96JQ5 239 aa10.08□□□□□ -0.8
HDAC6-221ENST00000477561 LRRCC1Q9C099 1032 aa10.08□□□□□ -0.8
HDAC6-221ENST00000477561 ZNF112Q9UJU3 913 aa10.08□□□□□ -0.8
HDAC6-221ENST00000477561 GPR25O00155 361 aa10.07□□□□□ -0.8
HDAC6-221ENST00000477561 GOLIM4O00461 696 aa10.07□□□□□ -0.8
HDAC6-221ENST00000477561 IRF6O14896 467 aa10.07□□□□□ -0.8
HDAC6-221ENST00000477561 GTF2A2P52657 109 aa10.07□□□□□ -0.8
HDAC6-221ENST00000477561 PPP4CP60510 307 aa10.07□□□□□ -0.8
HDAC6-221ENST00000477561 MAP3K12Q12852 859 aa10.07□□□□□ -0.8
HDAC6-221ENST00000477561 ZNF296Q8WUU4 475 aaPredicted RBP10.07□□□□□ -0.8
HDAC6-221ENST00000477561 BRI3BPQ8WY22 251 aa10.07□□□□□ -0.8
HDAC6-221ENST00000477561 ABHD8Q96I13 439 aa10.07□□□□□ -0.8
HDAC6-221ENST00000477561 MCOLN1Q9GZU1 580 aa10.07□□□□□ -0.8
HDAC6-221ENST00000477561 OSBPL5Q9H0X9 879 aaPredicted RBP10.07□□□□□ -0.8
HDAC6-221ENST00000477561 BOLA2Q9H3K6 86 aa10.07□□□□□ -0.8
HDAC6-221ENST00000477561 MYO5AQ9Y4I1 1855 aaKnown RBP10.06□□□□□ -0.8
HDAC6-221ENST00000477561 ATRNL1Q5VV63 1379 aa10.06□□□□□ -0.8
HDAC6-221ENST00000477561 TESPA1A2RU30 521 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-221ENST00000477561 PHF20L1A8MW92 1017 aa10.06□□□□□ -0.8
HDAC6-221ENST00000477561 MAP4K4O95819 1239 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-221ENST00000477561 ALDH1A1P00352 501 aa10.06□□□□□ -0.8
HDAC6-221ENST00000477561 CRHR2Q13324 411 aa10.06□□□□□ -0.8
HDAC6-221ENST00000477561 PPIL2Q13356 520 aa10.06□□□□□ -0.8
HDAC6-221ENST00000477561 SLC4A8Q2Y0W8 1093 aa10.06□□□□□ -0.8
HDAC6-221ENST00000477561 OTUD7BQ6GQQ9 843 aa10.06□□□□□ -0.8
HDAC6-221ENST00000477561 FAM43AQ8N2R8 423 aa10.06□□□□□ -0.8
HDAC6-221ENST00000477561 DCTPP1Q9H773 170 aa10.06□□□□□ -0.8
HDAC6-221ENST00000477561 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.06□□□□□ -0.8
HDAC6-221ENST00000477561 PPP4R2Q9NY27 417 aa10.06□□□□□ -0.8
HDAC6-221ENST00000477561 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-221ENST00000477561 SAP30BPQ9UHR5 308 aaKnown RBP10.06□□□□□ -0.8
HDAC6-221ENST00000477561 PLCG2P16885 1265 aa10.05□□□□□ -0.8
HDAC6-221ENST00000477561 ATP5JP18859 108 aa10.05□□□□□ -0.8
HDAC6-221ENST00000477561 MAP3K10Q02779 954 aa10.05□□□□□ -0.8
HDAC6-221ENST00000477561 PPATQ06203 517 aa10.05□□□□□ -0.8
HDAC6-221ENST00000477561 SNAPC2Q13487 334 aa10.05□□□□□ -0.8
HDAC6-221ENST00000477561 TTF1Q15361 905 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-221ENST00000477561 SLFNL1Q499Z3 407 aa10.05□□□□□ -0.8
HDAC6-221ENST00000477561 NOL9Q5SY16 702 aaKnown RBP10.05□□□□□ -0.8
HDAC6-221ENST00000477561 SLC9C2Q5TAH2 1124 aa10.05□□□□□ -0.8
HDAC6-221ENST00000477561 TSHZ3Q63HK5 1081 aa10.05□□□□□ -0.8
HDAC6-221ENST00000477561 CCDC84Q86UT8 332 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-221ENST00000477561 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.05□□□□□ -0.8
HDAC6-221ENST00000477561 PICK1Q9NRD5 415 aa10.05□□□□□ -0.8
HDAC6-221ENST00000477561 PAG1Q9NWQ8 432 aa10.05□□□□□ -0.8
HDAC6-221ENST00000477561 PALD1Q9ULE6 856 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms