RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 GIMAP6Q6P9H5 292 aa9.14□□□□□ -0.95
VPS50-212ENST00000476413 TREML4Q6UXN2 200 aa9.14□□□□□ -0.95
VPS50-212ENST00000476413 FBXO11Q86XK2 927 aa9.14□□□□□ -0.95
VPS50-212ENST00000476413 UBASH3BQ8TF42 649 aa9.14□□□□□ -0.95
VPS50-212ENST00000476413 ANAPC16Q96DE5 110 aa9.14□□□□□ -0.95
VPS50-212ENST00000476413 ACSBG1Q96GR2 724 aa9.14□□□□□ -0.95
VPS50-212ENST00000476413 WDR18Q9BV38 432 aa9.14□□□□□ -0.95
VPS50-212ENST00000476413 PRKAG3Q9UGI9 489 aa9.14□□□□□ -0.95
VPS50-212ENST00000476413 PCDHB14Q9Y5E9 798 aa9.14□□□□□ -0.95
VPS50-212ENST00000476413 WISP1O95388 367 aa9.13□□□□□ -0.95
VPS50-212ENST00000476413 PDE3AQ14432 1141 aa9.13□□□□□ -0.95
VPS50-212ENST00000476413 NBPF6Q5VWK0 638 aa9.13□□□□□ -0.95
VPS50-212ENST00000476413 ANKS3Q6ZW76 656 aa9.13□□□□□ -0.95
VPS50-212ENST00000476413 CYFIP1Q7L576 1253 aa9.13□□□□□ -0.95
VPS50-212ENST00000476413 CKAP2LQ8IYA6 745 aa9.13□□□□□ -0.95
VPS50-212ENST00000476413 FMR1NBQ8N0W7 255 aaPredicted RBP9.13□□□□□ -0.95
VPS50-212ENST00000476413 RBBP8NLQ8NC74 664 aaPredicted RBP9.13□□□□□ -0.95
VPS50-212ENST00000476413 CPLX3Q8WVH0 158 aa9.13□□□□□ -0.95
VPS50-212ENST00000476413 NBPF4Q96M43 638 aa9.13□□□□□ -0.95
VPS50-212ENST00000476413 OSBPL2Q9H1P3 480 aa9.13□□□□□ -0.95
VPS50-212ENST00000476413 CORINQ9Y5Q5 1042 aa9.13□□□□□ -0.95
VPS50-212ENST00000476413 SNCAIPQ9Y6H5 919 aa9.13□□□□□ -0.95
VPS50-212ENST00000476413 EIF6P56537 245 aaKnown RBP9.12□□□□□ -0.95
VPS50-212ENST00000476413 RING1Q06587 406 aa9.12□□□□□ -0.95
VPS50-212ENST00000476413 ZC3H12AQ5D1E8 599 aaKnown RBP9.12□□□□□ -0.95
VPS50-212ENST00000476413 TRAPPC3LQ5T215 181 aa9.12□□□□□ -0.95
VPS50-212ENST00000476413 LSRQ86X29 649 aaPredicted RBP9.12□□□□□ -0.95
VPS50-212ENST00000476413 HNRNPLLQ8WVV9 542 aaKnown RBP9.12□□□□□ -0.95
VPS50-212ENST00000476413 FERD3LQ96RJ6 166 aa9.12□□□□□ -0.95
VPS50-212ENST00000476413 SYNGAP1Q96PV0 1343 aa9.11□□□□□ -0.95
VPS50-212ENST00000476413 SMAD7O15105 426 aaKnown RBP9.11□□□□□ -0.95
VPS50-212ENST00000476413 AOC2O75106 756 aa9.11□□□□□ -0.95
VPS50-212ENST00000476413 ANTXR1Q9H6X2 564 aa9.11□□□□□ -0.95
VPS50-212ENST00000476413 RRAGCQ9HB90 399 aa9.11□□□□□ -0.95
VPS50-212ENST00000476413 DCDC2CA8MYV0 355 aa9.1□□□□□ -0.95
VPS50-212ENST00000476413 HTR3BO95264 441 aa9.1□□□□□ -0.95
VPS50-212ENST00000476413 LORP23490 312 aaPredicted RBP9.1□□□□□ -0.95
VPS50-212ENST00000476413 RAB33AQ14088 237 aa9.1□□□□□ -0.95
VPS50-212ENST00000476413 SVOPQ8N4V2 548 aa9.1□□□□□ -0.95
VPS50-212ENST00000476413 NEDD1Q8NHV4 660 aa9.1□□□□□ -0.95
VPS50-212ENST00000476413 TMPRSS13Q9BYE2 586 aa9.1□□□□□ -0.95
VPS50-212ENST00000476413 MEIS3P2A8K0S8 358 aa9.09□□□□□ -0.95
VPS50-212ENST00000476413 DNAJA2O60884 412 aa9.09□□□□□ -0.95
VPS50-212ENST00000476413 IMPDH2P12268 514 aa9.09□□□□□ -0.95
VPS50-212ENST00000476413 FBXW10Q5XX13 1052 aa9.09□□□□□ -0.95
VPS50-212ENST00000476413 DIEXFQ68CQ4 756 aaKnown RBP9.09□□□□□ -0.95
VPS50-212ENST00000476413 KIAA1211Q6ZU35 1233 aa9.09□□□□□ -0.95
VPS50-212ENST00000476413 HDXQ7Z353 690 aa9.09□□□□□ -0.95
VPS50-212ENST00000476413 NOP9Q86U38 636 aaKnown RBP9.09□□□□□ -0.95
VPS50-212ENST00000476413 ZSWIM4Q9H7M6 989 aa9.09□□□□□ -0.95
VPS50-212ENST00000476413 PPP1R9AQ9ULJ8 1098 aa9.09□□□□□ -0.95
VPS50-212ENST00000476413 TACC3Q9Y6A5 838 aa9.09□□□□□ -0.95
VPS50-212ENST00000476413 SMARCA5O60264 1052 aaPredicted RBP9.08□□□□□ -0.96
VPS50-212ENST00000476413 EXOSC6Q5RKV6 272 aaKnown RBP9.08□□□□□ -0.96
VPS50-212ENST00000476413 C12orf40Q86WS4 652 aa9.08□□□□□ -0.96
VPS50-212ENST00000476413 OR6P1Q8NGX9 317 aa9.08□□□□□ -0.96
VPS50-212ENST00000476413 PLVAPQ9BX97 442 aa9.08□□□□□ -0.96
VPS50-212ENST00000476413 HIF3AQ9Y2N7 669 aa9.08□□□□□ -0.96
VPS50-212ENST00000476413 FAM229AH3BQW9 127 aa9.07□□□□□ -0.96
VPS50-212ENST00000476413 TMPRSS2O15393 492 aa9.07□□□□□ -0.96
VPS50-212ENST00000476413 NTF4P34130 210 aa9.07□□□□□ -0.96
VPS50-212ENST00000476413 BMS1Q14692 1282 aaKnown RBP9.07□□□□□ -0.96
VPS50-212ENST00000476413 DUOXA2Q1HG44 320 aa9.07□□□□□ -0.96
VPS50-212ENST00000476413 TNNI3KQ59H18 835 aa9.07□□□□□ -0.96
VPS50-212ENST00000476413 HP1BP3Q5SSJ5 553 aaPredicted RBP9.07□□□□□ -0.96
VPS50-212ENST00000476413 RUFY4Q6ZNE9 571 aa9.07□□□□□ -0.96
VPS50-212ENST00000476413 DCAF11Q8TEB1 546 aa9.07□□□□□ -0.96
VPS50-212ENST00000476413 ELMO3Q96BJ8 720 aa9.07□□□□□ -0.96
VPS50-212ENST00000476413 TNKS2Q9H2K2 1166 aa9.07□□□□□ -0.96
VPS50-212ENST00000476413 ENAMQ9NRM1 1142 aa9.07□□□□□ -0.96
VPS50-212ENST00000476413 REV1Q9UBZ9 1251 aa9.07□□□□□ -0.96
VPS50-212ENST00000476413 CSADQ9Y600 493 aa9.07□□□□□ -0.96
VPS50-212ENST00000476413 MEGF11A6BM72 1044 aa9.06□□□□□ -0.96
VPS50-212ENST00000476413 GNB5O14775 395 aa9.06□□□□□ -0.96
VPS50-212ENST00000476413 RAC1P63000 192 aa9.06□□□□□ -0.96
VPS50-212ENST00000476413 ERVK-24P63145 666 aa9.06□□□□□ -0.96
VPS50-212ENST00000476413 TMEM201Q5SNT2 666 aa9.06□□□□□ -0.96
VPS50-212ENST00000476413 FAM177A1Q8N128 213 aaPredicted RBP9.06□□□□□ -0.96
VPS50-212ENST00000476413 CELF2-AS1Q8N7Q2 184 aa9.06□□□□□ -0.96
VPS50-212ENST00000476413 CRBNQ96SW2 442 aa9.06□□□□□ -0.96
VPS50-212ENST00000476413 CRIM1Q9NZV1 1036 aa9.06□□□□□ -0.96
VPS50-212ENST00000476413 CDK11AQ9UQ88 783 aaPredicted RBP9.06□□□□□ -0.96
VPS50-212ENST00000476413 CADPSQ9ULU8 1353 aa9.06□□□□□ -0.96
VPS50-212ENST00000476413 K7ELQ4 463 aaPredicted RBP9.05□□□□□ -0.96
VPS50-212ENST00000476413 WIPF1O43516 503 aa9.05□□□□□ -0.96
VPS50-212ENST00000476413 SLFN14P0C7P3 912 aa9.05□□□□□ -0.96
VPS50-212ENST00000476413 GRK4P32298 578 aa9.05□□□□□ -0.96
VPS50-212ENST00000476413 CASP7P55210 303 aa9.05□□□□□ -0.96
VPS50-212ENST00000476413 ID3Q02535 119 aa9.05□□□□□ -0.96
VPS50-212ENST00000476413 PPM1JQ5JR12 505 aa9.05□□□□□ -0.96
VPS50-212ENST00000476413 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.05□□□□□ -0.96
VPS50-212ENST00000476413 TMEM40Q8WWA1 233 aa9.05□□□□□ -0.96
VPS50-212ENST00000476413 MKL1Q969V6 931 aa9.05□□□□□ -0.96
VPS50-212ENST00000476413 RUSC1Q9BVN2 902 aa9.05□□□□□ -0.96
VPS50-212ENST00000476413 SUGCTQ9HAC7 445 aa9.05□□□□□ -0.96
VPS50-212ENST00000476413 SIRPGQ9P1W8 387 aa9.05□□□□□ -0.96
VPS50-212ENST00000476413 PRAMEF27A3QJZ7 478 aa9.04□□□□□ -0.96
VPS50-212ENST00000476413 SLC22A31A6NKX4 558 aa9.04□□□□□ -0.96
VPS50-212ENST00000476413 PLCG1P19174 1290 aa9.04□□□□□ -0.96
VPS50-212ENST00000476413 RASA3Q14644 834 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms