RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 CTAGE5O15320 804 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 MSX1P28360 303 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 ARSDP51689 593 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 PSMD2Q13200 908 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 PDE3AQ14432 1141 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 IQUBQ8NA54 791 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 TTC16Q8NEE8 873 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 PAIP2Q9BPZ3 127 aaKnown RBP6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 TSPY26PQ9H489 355 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 ARHGAP35Q9NRY4 1499 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 STRCP1A6NGW2 1772 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 IQGAP3Q86VI3 1631 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 TTLL8A6PVC2 850 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 H0YHG0 523 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 HTATSF1O43719 755 aaKnown RBP6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 AVPP01185 164 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 SARNPP82979 210 aaKnown RBP6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 BIRC2Q13490 618 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 KRBA2Q6ZNG9 492 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 CCDC191Q8NCU4 936 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 GOLGA5Q8TBA6 731 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 PPM1EQ8WY54 764 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 C8orf37Q96NL8 207 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 TIMMDC1Q9NPL8 285 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 RRP15Q9Y3B9 282 aaKnown RBP6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 SOS2Q07890 1332 aaPredicted RBP6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 PRAG1Q86YV5 1406 aa6.05□□□□□ -1.44
TMEM39A-206ENST00000473684 GNA15P30679 374 aa6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 TRIP4Q15650 581 aaPredicted RBP6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 ZSCAN26Q16670 478 aa6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 USP20Q9Y2K6 914 aa6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 MROH1Q8NDA8 1641 aa6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 NAIPQ13075 1403 aa6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 K7ELQ4 463 aaPredicted RBP6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 RHOQP17081 205 aa6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 HDLBPQ00341 1268 aaKnown RBP6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 MAP9Q49MG5 647 aa6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 DUSP27Q5VZP5 1158 aa6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 LRRC69Q6ZNQ3 347 aa6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 MMS22LQ6ZRQ5 1243 aa6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 CCDC112Q8NEF3 446 aa6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 SYAP1Q96A49 352 aaPredicted RBP6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 PDZRN3Q9UPQ7 1066 aa6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 RTCBQ9Y3I0 505 aaKnown RBP6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 KCNMB2Q9Y691 235 aa6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 GCC2Q8IWJ2 1684 aa6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 TROQ12816 1431 aaPredicted RBP6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 ATP7AQ04656 1500 aa6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 IPO7O95373 1038 aaKnown RBP6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 RBM6P78332 1123 aaKnown RBP6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 MTA1Q13330 715 aa6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 PPP2R5AQ15172 486 aa6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 ARSJQ5FYB0 599 aaPredicted RBP6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 MCTP1Q6DN14 999 aa6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 FBXO18Q8NFZ0 1043 aa6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 NEUROD4Q9HD90 331 aa6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 VTI1BQ9UEU0 232 aa6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 LRRFIP2Q9Y608 721 aaKnown RBP6.04□□□□□ -1.44
TMEM39A-206ENST00000473684 PARD3Q8TEW0 1356 aa6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 CAMSAP1Q5T5Y3 1602 aa6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 CPNE3O75131 537 aaKnown RBP6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 TNFRSF21O75509 655 aa6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 CPP00450 1065 aa6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 NEFHP12036 1026 aa6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 TNNT1P13805 278 aa6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 GRNP28799 593 aaKnown RBP6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 IRX1P78414 480 aaPredicted RBP6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 SART3Q15020 963 aaKnown RBP6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 ZC3H12AQ5D1E8 599 aaKnown RBP6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 TMEM87AQ8NBN3 555 aa6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 BORCS6Q96GS4 357 aa6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 TTC12Q9H892 705 aaPredicted RBP6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 FNDC3AQ9Y2H6 1198 aaKnown RBP6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 ANKRD36BQ8N2N9 1353 aa6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 A0A1W2PNR3 127 aa6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 SYCE3A1L190 88 aa6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 IVLP07476 585 aa6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 SCARF1Q14162 830 aa6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 RGL3Q3MIN7 710 aa6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 PDE12Q6L8Q7 609 aaKnown RBP6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 ANKRD23Q86SG2 305 aa6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 FRMD6Q96NE9 622 aa6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 NUCKS1Q9H1E3 243 aaKnown RBP6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 CRISPLD1Q9H336 500 aa6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 FOXD3Q9UJU5 478 aaPredicted RBP6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 CDK12Q9NYV4 1490 aaPredicted RBP6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 ARHGAP23Q9P227 1491 aa6.03□□□□□ -1.44
TMEM39A-206ENST00000473684 CYP2E1P05181 493 aaPredicted RBP6.02□□□□□ -1.45
TMEM39A-206ENST00000473684 BMP1P13497 986 aa6.02□□□□□ -1.45
TMEM39A-206ENST00000473684 TYRO3Q06418 890 aa6.02□□□□□ -1.45
TMEM39A-206ENST00000473684 TRIM46Q7Z4K8 759 aa6.02□□□□□ -1.45
TMEM39A-206ENST00000473684 CMTR1Q8N1G2 835 aaKnown RBP6.02□□□□□ -1.45
TMEM39A-206ENST00000473684 ZNF513Q8N8E2 541 aaPredicted RBP6.02□□□□□ -1.45
TMEM39A-206ENST00000473684 PSD3Q9NYI0 1048 aa6.02□□□□□ -1.45
TMEM39A-206ENST00000473684 AK5Q9Y6K8 562 aa6.02□□□□□ -1.45
TMEM39A-206ENST00000473684 UHRF1BP1Q6BDS2 1440 aa6.02□□□□□ -1.45
TMEM39A-206ENST00000473684 CASKIN1Q8WXD9 1431 aa6.02□□□□□ -1.45
TMEM39A-206ENST00000473684 PRDM15P57071 1507 aaPredicted RBP6.02□□□□□ -1.45
TMEM39A-206ENST00000473684 PIK3C2BO00750 1634 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms