RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 PIP4P2Q8N4L2 257 aa13.06□□□□□ -0.32
CDHR3-209ENST00000472116 TDRD7Q8NHU6 1098 aaKnown RBP13.06□□□□□ -0.32
CDHR3-209ENST00000472116 TBC1D22AQ8WUA7 517 aa13.06□□□□□ -0.32
CDHR3-209ENST00000472116 DOCK1Q14185 1865 aa13.06□□□□□ -0.32
CDHR3-209ENST00000472116 PI4KAP2A4QPH2 592 aa13.05□□□□□ -0.32
CDHR3-209ENST00000472116 NEURL1BA8MQ27 555 aa13.05□□□□□ -0.32
CDHR3-209ENST00000472116 H7C1W4 665 aa13.05□□□□□ -0.32
CDHR3-209ENST00000472116 ELL2O00472 640 aaPredicted RBP13.05□□□□□ -0.32
CDHR3-209ENST00000472116 COL6A1P12109 1028 aa13.05□□□□□ -0.32
CDHR3-209ENST00000472116 PRKAR2AP13861 404 aaKnown RBP13.05□□□□□ -0.32
CDHR3-209ENST00000472116 CCDC30Q5VVM6 783 aa13.05□□□□□ -0.32
CDHR3-209ENST00000472116 PI4KAP1Q8N8J0 262 aa13.05□□□□□ -0.32
CDHR3-209ENST00000472116 ADAMTS19Q8TE59 1207 aa13.05□□□□□ -0.32
CDHR3-209ENST00000472116 ATXN2LQ8WWM7 1075 aaKnown RBP13.05□□□□□ -0.32
CDHR3-209ENST00000472116 TTYH1Q9H313 450 aaPredicted RBP13.05□□□□□ -0.32
CDHR3-209ENST00000472116 MYH16Q9H6N6 1097 aa13.05□□□□□ -0.32
CDHR3-209ENST00000472116 CNNM1Q9NRU3 951 aa13.05□□□□□ -0.32
CDHR3-209ENST00000472116 ZNF112Q9UJU3 913 aa13.05□□□□□ -0.32
CDHR3-209ENST00000472116 ARIH1Q9Y4X5 557 aaPredicted RBP13.05□□□□□ -0.32
CDHR3-209ENST00000472116 ZHX2Q9Y6X8 837 aa13.05□□□□□ -0.32
CDHR3-209ENST00000472116 SYNGAP1Q96PV0 1343 aa13.05□□□□□ -0.32
CDHR3-209ENST00000472116 TCF20Q9UGU0 1960 aaKnown RBP13.04□□□□□ -0.32
CDHR3-209ENST00000472116 CSF1RP07333 972 aa13.04□□□□□ -0.32
CDHR3-209ENST00000472116 TRIM32Q13049 653 aa13.04□□□□□ -0.32
CDHR3-209ENST00000472116 CHAF1AQ13111 956 aaPredicted RBP13.04□□□□□ -0.32
CDHR3-209ENST00000472116 SHHQ15465 462 aa13.04□□□□□ -0.32
CDHR3-209ENST00000472116 FAM151AQ8WW52 585 aa13.04□□□□□ -0.32
CDHR3-209ENST00000472116 ZDHHC15Q96MV8 337 aa13.04□□□□□ -0.32
CDHR3-209ENST00000472116 UHRF1Q96T88 793 aaPredicted RBP13.04□□□□□ -0.32
CDHR3-209ENST00000472116 PLXNB2O15031 1838 aa13.04□□□□□ -0.32
CDHR3-209ENST00000472116 GYG1P46976 350 aa13.03□□□□□ -0.32
CDHR3-209ENST00000472116 GCLCP48506 637 aaPredicted RBP13.03□□□□□ -0.32
CDHR3-209ENST00000472116 TRMT44Q8IYL2 757 aaKnown RBP13.03□□□□□ -0.32
CDHR3-209ENST00000472116 SCYL3Q8IZE3 742 aa13.03□□□□□ -0.32
CDHR3-209ENST00000472116 MBIPQ9NS73 344 aa13.03□□□□□ -0.32
CDHR3-209ENST00000472116 THEGQ9P2T0 379 aa13.03□□□□□ -0.32
CDHR3-209ENST00000472116 PHIPQ8WWQ0 1821 aa13.03□□□□□ -0.32
CDHR3-209ENST00000472116 PIEZO1Q92508 2521 aa13.02□□□□□ -0.32
CDHR3-209ENST00000472116 CDH23Q9H251 3354 aa13.02□□□□□ -0.32
CDHR3-209ENST00000472116 CYP2B6P20813 491 aa13.02□□□□□ -0.33
CDHR3-209ENST00000472116 TCP10Q12799 353 aa13.02□□□□□ -0.33
CDHR3-209ENST00000472116 UBE4AQ14139 1066 aa13.02□□□□□ -0.33
CDHR3-209ENST00000472116 LDHAL6AQ6ZMR3 332 aa13.02□□□□□ -0.33
CDHR3-209ENST00000472116 TRIB2Q92519 343 aa13.02□□□□□ -0.33
CDHR3-209ENST00000472116 SENP6Q9GZR1 1112 aaPredicted RBP13.02□□□□□ -0.33
CDHR3-209ENST00000472116 AGTPBP1Q9UPW5 1226 aa13.02□□□□□ -0.33
CDHR3-209ENST00000472116 ZKSCAN1P17029 563 aaPredicted RBP13.01□□□□□ -0.33
CDHR3-209ENST00000472116 MRPS5P82675 430 aaKnown RBP13.01□□□□□ -0.33
CDHR3-209ENST00000472116 TRIM26Q12899 539 aaPredicted RBP13.01□□□□□ -0.33
CDHR3-209ENST00000472116 PABPC4Q13310 644 aaKnown RBP eCLIP13.01□□□□□ -0.33
CDHR3-209ENST00000472116 GCKRQ14397 625 aa13.01□□□□□ -0.33
CDHR3-209ENST00000472116 CCDC57Q2TAC2 916 aa13.01□□□□□ -0.33
CDHR3-209ENST00000472116 USP38Q8NB14 1042 aa13.01□□□□□ -0.33
CDHR3-209ENST00000472116 SOCS4Q8WXH5 440 aa13.01□□□□□ -0.33
CDHR3-209ENST00000472116 PPM1EQ8WY54 764 aa13.01□□□□□ -0.33
CDHR3-209ENST00000472116 ASB2Q96Q27 587 aa13.01□□□□□ -0.33
CDHR3-209ENST00000472116 GAS2L1Q99501 681 aaPredicted RBP13.01□□□□□ -0.33
CDHR3-209ENST00000472116 NUDT12Q9BQG2 462 aa13.01□□□□□ -0.33
CDHR3-209ENST00000472116 MRIQ9BWK5 157 aa13.01□□□□□ -0.33
CDHR3-209ENST00000472116 STK31Q9BXU1 1019 aa13.01□□□□□ -0.33
CDHR3-209ENST00000472116 LRRFIP2Q9Y608 721 aaKnown RBP13.01□□□□□ -0.33
CDHR3-209ENST00000472116 CACNA1FO60840 1977 aa13.01□□□□□ -0.33
CDHR3-209ENST00000472116 TRIM75PA6NK02 468 aa13□□□□□ -0.33
CDHR3-209ENST00000472116 PDE3AQ14432 1141 aa13□□□□□ -0.33
CDHR3-209ENST00000472116 CAVIN4Q5BKX8 364 aa13□□□□□ -0.33
CDHR3-209ENST00000472116 C9orf50Q5SZB4 431 aa13□□□□□ -0.33
CDHR3-209ENST00000472116 MAP3K21Q5TCX8 1036 aa13□□□□□ -0.33
CDHR3-209ENST00000472116 HHIPL2Q6UWX4 724 aa13□□□□□ -0.33
CDHR3-209ENST00000472116 CCDC146Q8IYE0 955 aa13□□□□□ -0.33
CDHR3-209ENST00000472116 FAM84BQ96KN1 310 aaPredicted RBP13□□□□□ -0.33
CDHR3-209ENST00000472116 PRDM5Q9NQX1 630 aaPredicted RBP13□□□□□ -0.33
CDHR3-209ENST00000472116 IQSEC3Q9UPP2 1182 aaPredicted RBP13□□□□□ -0.33
CDHR3-209ENST00000472116 TRIM35Q9UPQ4 493 aa13□□□□□ -0.33
CDHR3-209ENST00000472116 AFG3L2Q9Y4W6 797 aa13□□□□□ -0.33
CDHR3-209ENST00000472116 DNAH12Q6ZR08 3092 aa12.99□□□□□ -0.33
CDHR3-209ENST00000472116 PTPRAP18433 802 aa12.99□□□□□ -0.33
CDHR3-209ENST00000472116 ATN1P54259 1190 aaPredicted RBP12.99□□□□□ -0.33
CDHR3-209ENST00000472116 APOBEC3HQ6NTF7 200 aaKnown RBP12.99□□□□□ -0.33
CDHR3-209ENST00000472116 CCAR1Q8IX12 1150 aaKnown RBP12.99□□□□□ -0.33
CDHR3-209ENST00000472116 GJD2Q9UKL4 321 aa12.99□□□□□ -0.33
CDHR3-209ENST00000472116 SUGT1Q9Y2Z0 365 aa12.99□□□□□ -0.33
CDHR3-209ENST00000472116 RLFQ13129 1914 aa12.99□□□□□ -0.33
CDHR3-209ENST00000472116 LOC285556D6RIA3 1793 aa12.99□□□□□ -0.33
CDHR3-209ENST00000472116 BDP1A6H8Y1 2624 aa12.98□□□□□ -0.33
CDHR3-209ENST00000472116 ATAD5Q96QE3 1844 aa12.98□□□□□ -0.33
CDHR3-209ENST00000472116 XRCC5P13010 732 aaKnown RBP12.98□□□□□ -0.33
CDHR3-209ENST00000472116 ZEB1P37275 1124 aaPredicted RBP12.98□□□□□ -0.33
CDHR3-209ENST00000472116 RTP1P59025 263 aa12.98□□□□□ -0.33
CDHR3-209ENST00000472116 GNAI1P63096 354 aa12.98□□□□□ -0.33
CDHR3-209ENST00000472116 CALD1Q05682 793 aaKnown RBP12.98□□□□□ -0.33
CDHR3-209ENST00000472116 GRIK5Q16478 980 aa12.98□□□□□ -0.33
CDHR3-209ENST00000472116 SNX27Q96L92 541 aa12.98□□□□□ -0.33
CDHR3-209ENST00000472116 RNPC3Q96LT9 517 aaKnown RBP12.98□□□□□ -0.33
CDHR3-209ENST00000472116 ATP11BQ9Y2G3 1177 aa12.98□□□□□ -0.33
CDHR3-209ENST00000472116 MUC6Q6W4X9 2439 aa12.97□□□□□ -0.33
CDHR3-209ENST00000472116 HAX1O00165 279 aa12.97□□□□□ -0.33
CDHR3-209ENST00000472116 PITPNM1O00562 1244 aa12.97□□□□□ -0.33
CDHR3-209ENST00000472116 CACNB2Q08289 660 aaPredicted RBP12.97□□□□□ -0.33
CDHR3-209ENST00000472116 GRIN2CQ14957 1233 aa12.97□□□□□ -0.33
CDHR3-209ENST00000472116 ZSCAN29Q8IWY8 852 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms