RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 EPHA1P21709 976 aa8.44□□□□□ -1.06
CKS1B-204ENST00000471245 ARNTP27540 789 aa8.44□□□□□ -1.06
CKS1B-204ENST00000471245 GSK3AP49840 483 aa8.44□□□□□ -1.06
CKS1B-204ENST00000471245 AP3B2Q13367 1082 aa8.44□□□□□ -1.06
CKS1B-204ENST00000471245 RASIP1Q5U651 963 aa8.44□□□□□ -1.06
CKS1B-204ENST00000471245 NBPF6Q5VWK0 638 aa8.44□□□□□ -1.06
CKS1B-204ENST00000471245 LLGL2Q6P1M3 1020 aa8.44□□□□□ -1.06
CKS1B-204ENST00000471245 C8orf86Q6ZUL3 223 aa8.44□□□□□ -1.06
CKS1B-204ENST00000471245 GATAD2BQ8WXI9 593 aa8.44□□□□□ -1.06
CKS1B-204ENST00000471245 WNT8BQ93098 351 aa8.44□□□□□ -1.06
CKS1B-204ENST00000471245 NBPF4Q96M43 638 aa8.44□□□□□ -1.06
CKS1B-204ENST00000471245 PLVAPQ9BX97 442 aa8.44□□□□□ -1.06
CKS1B-204ENST00000471245 SH2B1Q9NRF2 756 aaPredicted RBP8.44□□□□□ -1.06
CKS1B-204ENST00000471245 F13A1P00488 732 aa8.43□□□□□ -1.06
CKS1B-204ENST00000471245 CRKP46108 304 aa8.43□□□□□ -1.06
CKS1B-204ENST00000471245 ZNF252P-AS1Q0IIN9 211 aa8.43□□□□□ -1.06
CKS1B-204ENST00000471245 MPP2Q14168 576 aa8.43□□□□□ -1.06
CKS1B-204ENST00000471245 GDF6Q6KF10 455 aaPredicted RBP8.43□□□□□ -1.06
CKS1B-204ENST00000471245 NKD1Q969G9 470 aa8.43□□□□□ -1.06
CKS1B-204ENST00000471245 ABCC2Q92887 1545 aa8.43□□□□□ -1.06
CKS1B-204ENST00000471245 FAM221AA4D161 298 aa8.42□□□□□ -1.06
CKS1B-204ENST00000471245 BAG6P46379 1132 aa8.42□□□□□ -1.06
CKS1B-204ENST00000471245 BNC2Q6ZN30 1099 aaPredicted RBP8.42□□□□□ -1.06
CKS1B-204ENST00000471245 NOP9Q86U38 636 aaKnown RBP8.42□□□□□ -1.06
CKS1B-204ENST00000471245 PDZD3Q86UT5 571 aa8.42□□□□□ -1.06
CKS1B-204ENST00000471245 WFDC8Q8IUA0 241 aa8.42□□□□□ -1.06
CKS1B-204ENST00000471245 MAP4K3Q8IVH8 894 aa8.42□□□□□ -1.06
CKS1B-204ENST00000471245 GAL3ST3Q96A11 431 aa8.42□□□□□ -1.06
CKS1B-204ENST00000471245 PCDHB5Q9Y5E4 795 aa8.42□□□□□ -1.06
CKS1B-204ENST00000471245 ASXL2Q76L83 1435 aa8.42□□□□□ -1.06
CKS1B-204ENST00000471245 PLB1Q6P1J6 1458 aa8.41□□□□□ -1.06
CKS1B-204ENST00000471245 CILPO75339 1184 aa8.41□□□□□ -1.06
CKS1B-204ENST00000471245 CANXP27824 592 aaKnown RBP8.41□□□□□ -1.06
CKS1B-204ENST00000471245 PIP4K2BP78356 416 aa8.41□□□□□ -1.06
CKS1B-204ENST00000471245 CWF19L2Q2TBE0 894 aaKnown RBP8.41□□□□□ -1.06
CKS1B-204ENST00000471245 TRAPPC3LQ5T215 181 aa8.41□□□□□ -1.06
CKS1B-204ENST00000471245 CKAP2LQ8IYA6 745 aa8.41□□□□□ -1.06
CKS1B-204ENST00000471245 IL22RA1Q8N6P7 574 aa8.41□□□□□ -1.06
CKS1B-204ENST00000471245 STK35Q8TDR2 534 aa8.41□□□□□ -1.06
CKS1B-204ENST00000471245 DCAF11Q8TEB1 546 aa8.41□□□□□ -1.06
CKS1B-204ENST00000471245 ZNF408Q9H9D4 720 aa8.41□□□□□ -1.06
CKS1B-204ENST00000471245 PPME1Q9Y570 386 aa8.41□□□□□ -1.06
CKS1B-204ENST00000471245 PTPRGP23470 1445 aa8.4□□□□□ -1.06
CKS1B-204ENST00000471245 SOX1O00570 391 aaPredicted RBP8.4□□□□□ -1.06
CKS1B-204ENST00000471245 TRIM37O94972 964 aa8.4□□□□□ -1.06
CKS1B-204ENST00000471245 TRIM28Q13263 835 aaKnown RBP8.4□□□□□ -1.06
CKS1B-204ENST00000471245 SEPT6Q14141 434 aa8.4□□□□□ -1.06
CKS1B-204ENST00000471245 CCDC144BQ3MJ40 725 aa8.4□□□□□ -1.06
CKS1B-204ENST00000471245 PMFBP1Q8TBY8 1022 aa8.4□□□□□ -1.06
CKS1B-204ENST00000471245 FBXO41Q8TF61 875 aa8.4□□□□□ -1.06
CKS1B-204ENST00000471245 OSBPL2Q9H1P3 480 aa8.4□□□□□ -1.06
CKS1B-204ENST00000471245 CACNA2D2Q9NY47 1150 aa8.4□□□□□ -1.06
CKS1B-204ENST00000471245 GSTP1P09211 210 aaKnown RBP8.39□□□□□ -1.07
CKS1B-204ENST00000471245 SEZ6Q53EL9 994 aa8.39□□□□□ -1.07
CKS1B-204ENST00000471245 PRRT3Q5FWE3 981 aa8.39□□□□□ -1.07
CKS1B-204ENST00000471245 FAM117BQ6P1L5 589 aa8.39□□□□□ -1.07
CKS1B-204ENST00000471245 REC114Q7Z4M0 266 aa8.39□□□□□ -1.07
CKS1B-204ENST00000471245 REXO1Q8N1G1 1221 aaKnown RBP8.39□□□□□ -1.07
CKS1B-204ENST00000471245 TMEM151AQ8N4L1 468 aa8.39□□□□□ -1.07
CKS1B-204ENST00000471245 GRIN3AQ8TCU5 1115 aa8.39□□□□□ -1.07
CKS1B-204ENST00000471245 SRRTQ9BXP5 876 aaKnown RBP8.39□□□□□ -1.07
CKS1B-204ENST00000471245 CBX8Q9HC52 389 aa8.39□□□□□ -1.07
CKS1B-204ENST00000471245 OSGEPQ9NPF4 335 aa8.39□□□□□ -1.07
CKS1B-204ENST00000471245 ZCCHC11Q5TAX3 1644 aaKnown RBP8.39□□□□□ -1.07
CKS1B-204ENST00000471245 A0A0A0MRY4 1105 aa8.38□□□□□ -1.07
CKS1B-204ENST00000471245 BPNT1O95861 308 aa8.38□□□□□ -1.07
CKS1B-204ENST00000471245 SPATA31C1P0DKV0 1188 aa8.38□□□□□ -1.07
CKS1B-204ENST00000471245 COL8A1P27658 744 aa8.38□□□□□ -1.07
CKS1B-204ENST00000471245 ARL4DP49703 201 aa8.38□□□□□ -1.07
CKS1B-204ENST00000471245 ZNF165P49910 485 aa8.38□□□□□ -1.07
CKS1B-204ENST00000471245 RAC1P63000 192 aa8.38□□□□□ -1.07
CKS1B-204ENST00000471245 RASSF7Q02833 373 aa8.38□□□□□ -1.07
CKS1B-204ENST00000471245 C19orf57Q0VDD7 668 aa8.38□□□□□ -1.07
CKS1B-204ENST00000471245 FBXO11Q86XK2 927 aa8.38□□□□□ -1.07
CKS1B-204ENST00000471245 DMRTC2Q8IXT2 367 aaPredicted RBP8.38□□□□□ -1.07
CKS1B-204ENST00000471245 FAM177A1Q8N128 213 aaPredicted RBP8.38□□□□□ -1.07
CKS1B-204ENST00000471245 FBXO27Q8NI29 283 aa8.38□□□□□ -1.07
CKS1B-204ENST00000471245 JARID2Q92833 1246 aaPredicted RBP8.38□□□□□ -1.07
CKS1B-204ENST00000471245 NRSN2Q9GZP1 204 aa8.38□□□□□ -1.07
CKS1B-204ENST00000471245 KIF21BO75037 1637 aa8.38□□□□□ -1.07
CKS1B-204ENST00000471245 EPRSP07814 1512 aaKnown RBP8.38□□□□□ -1.07
CKS1B-204ENST00000471245 UHRF1BP1LA0JNW5 1464 aa8.38□□□□□ -1.07
CKS1B-204ENST00000471245 TEX14Q8IWB6 1497 aa8.38□□□□□ -1.07
CKS1B-204ENST00000471245 TLR3O15455 904 aaKnown RBP8.37□□□□□ -1.07
CKS1B-204ENST00000471245 SMARCA5O60264 1052 aaPredicted RBP8.37□□□□□ -1.07
CKS1B-204ENST00000471245 CYP11A1P05108 521 aa8.37□□□□□ -1.07
CKS1B-204ENST00000471245 HNRNPUQ00839 825 aaKnown RBP eCLIP8.37□□□□□ -1.07
CKS1B-204ENST00000471245 RPL6Q02878 288 aaKnown RBP8.37□□□□□ -1.07
CKS1B-204ENST00000471245 GSTM4Q03013 218 aa8.37□□□□□ -1.07
CKS1B-204ENST00000471245 CPLX3Q8WVH0 158 aa8.37□□□□□ -1.07
CKS1B-204ENST00000471245 SHDQ96IW2 340 aa8.37□□□□□ -1.07
CKS1B-204ENST00000471245 KRT82Q9NSB4 513 aa8.37□□□□□ -1.07
CKS1B-204ENST00000471245 TTBK1Q5TCY1 1321 aaPredicted RBP8.36□□□□□ -1.07
CKS1B-204ENST00000471245 IMPDH2P12268 514 aa8.36□□□□□ -1.07
CKS1B-204ENST00000471245 ELNP15502 786 aa8.36□□□□□ -1.07
CKS1B-204ENST00000471245 ETFBP38117 255 aa8.36□□□□□ -1.07
CKS1B-204ENST00000471245 SERINC3Q13530 473 aa8.36□□□□□ -1.07
CKS1B-204ENST00000471245 TNNI3KQ59H18 835 aa8.36□□□□□ -1.07
CKS1B-204ENST00000471245 GIMAP6Q6P9H5 292 aa8.36□□□□□ -1.07
CKS1B-204ENST00000471245 FMR1NBQ8N0W7 255 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms