RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 LAMC3Q9Y6N6 1575 aa5.76□□□□□ -1.49
CD55-207ENST00000465534 TMEM265A0A087WTH1 108 aa5.76□□□□□ -1.49
CD55-207ENST00000465534 ZNF503-AS2A6NEH8 195 aa5.76□□□□□ -1.49
CD55-207ENST00000465534 ITIH2P19823 946 aa5.76□□□□□ -1.49
CD55-207ENST00000465534 ITPKAP23677 461 aa5.76□□□□□ -1.49
CD55-207ENST00000465534 CFPP27918 469 aa5.76□□□□□ -1.49
CD55-207ENST00000465534 ID3Q02535 119 aa5.76□□□□□ -1.49
CD55-207ENST00000465534 KIAA0319Q5VV43 1072 aa5.76□□□□□ -1.49
CD55-207ENST00000465534 FLAD1Q8NFF5 587 aa5.76□□□□□ -1.49
CD55-207ENST00000465534 BHLHE22Q8NFJ8 381 aaPredicted RBP5.76□□□□□ -1.49
CD55-207ENST00000465534 DUSP23Q9BVJ7 150 aa5.76□□□□□ -1.49
CD55-207ENST00000465534 EHD4Q9H223 541 aa5.76□□□□□ -1.49
CD55-207ENST00000465534 MKNK2Q9HBH9 465 aa5.76□□□□□ -1.49
CD55-207ENST00000465534 DISC1Q9NRI5 854 aa5.76□□□□□ -1.49
CD55-207ENST00000465534 MED1Q15648 1581 aaPredicted RBP5.75□□□□□ -1.49
CD55-207ENST00000465534 ZNF862O60290 1169 aa5.75□□□□□ -1.49
CD55-207ENST00000465534 RNGTTO60942 597 aaKnown RBP5.75□□□□□ -1.49
CD55-207ENST00000465534 SLFN14P0C7P3 912 aa5.75□□□□□ -1.49
CD55-207ENST00000465534 SSFA2P28290 1259 aa5.75□□□□□ -1.49
CD55-207ENST00000465534 RAP1GAPP47736 663 aa5.75□□□□□ -1.49
CD55-207ENST00000465534 ZNF157P51786 506 aaPredicted RBP5.75□□□□□ -1.49
CD55-207ENST00000465534 TTLL4Q14679 1199 aa5.75□□□□□ -1.49
CD55-207ENST00000465534 KCNMB1Q16558 191 aa5.75□□□□□ -1.49
CD55-207ENST00000465534 TOX2Q96NM4 488 aa5.75□□□□□ -1.49
CD55-207ENST00000465534 FAM53CQ9NYF3 392 aa5.75□□□□□ -1.49
CD55-207ENST00000465534 PDS5BQ9NTI5 1447 aa5.75□□□□□ -1.49
CD55-207ENST00000465534 HCLS1P14317 486 aaPredicted RBP5.74□□□□□ -1.49
CD55-207ENST00000465534 FKBP4Q02790 459 aaKnown RBP eCLIP5.74□□□□□ -1.49
CD55-207ENST00000465534 SF3B2Q13435 895 aaKnown RBP5.74□□□□□ -1.49
CD55-207ENST00000465534 ANO2Q9NQ90 1003 aa5.74□□□□□ -1.49
CD55-207ENST00000465534 TOP2BQ02880 1626 aa5.73□□□□□ -1.49
CD55-207ENST00000465534 LIN37Q96GY3 246 aaPredicted RBP5.73□□□□□ -1.49
CD55-207ENST00000465534 PCDHGC5Q9Y5F6 944 aa5.73□□□□□ -1.49
CD55-207ENST00000465534 ABL1P00519 1130 aa5.72□□□□□ -1.49
CD55-207ENST00000465534 ZNF211Q13398 564 aaPredicted RBP5.72□□□□□ -1.49
CD55-207ENST00000465534 KIF4BQ2VIQ3 1234 aa5.72□□□□□ -1.49
CD55-207ENST00000465534 LILRA6Q6PI73 481 aa5.72□□□□□ -1.49
CD55-207ENST00000465534 LCNL1Q6ZST4 164 aa5.72□□□□□ -1.49
CD55-207ENST00000465534 C1QL4Q86Z23 238 aa5.72□□□□□ -1.49
CD55-207ENST00000465534 TOP6BLQ8N6T0 577 aa5.72□□□□□ -1.49
CD55-207ENST00000465534 TNKS2Q9H2K2 1166 aa5.72□□□□□ -1.49
CD55-207ENST00000465534 NPHS2Q9NP85 383 aa5.72□□□□□ -1.49
CD55-207ENST00000465534 PCOLCE2Q9UKZ9 415 aa5.72□□□□□ -1.49
CD55-207ENST00000465534 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.71□□□□□ -1.49
CD55-207ENST00000465534 TSPAN15O95858 294 aa5.71□□□□□ -1.49
CD55-207ENST00000465534 PTPN12Q05209 780 aaKnown RBP5.71□□□□□ -1.49
CD55-207ENST00000465534 ZP2Q05996 745 aa5.71□□□□□ -1.49
CD55-207ENST00000465534 FAAP100Q0VG06 881 aa5.71□□□□□ -1.49
CD55-207ENST00000465534 IKZF1Q13422 519 aa5.71□□□□□ -1.49
CD55-207ENST00000465534 LRRC56Q8IYG6 542 aaPredicted RBP5.71□□□□□ -1.49
CD55-207ENST00000465534 ZSCAN18Q8TBC5 510 aaPredicted RBP5.71□□□□□ -1.49
CD55-207ENST00000465534 CCDC97Q96F63 343 aaPredicted RBP5.71□□□□□ -1.49
CD55-207ENST00000465534 ABCB6Q9NP58 842 aa5.71□□□□□ -1.49
CD55-207ENST00000465534 MTMR7Q9Y216 660 aa5.71□□□□□ -1.49
CD55-207ENST00000465534 TMEM88BA6NKF7 163 aa5.71□□□□□ -1.5
CD55-207ENST00000465534 NEFMP07197 916 aa5.71□□□□□ -1.5
CD55-207ENST00000465534 GSTP1P09211 210 aaKnown RBP5.71□□□□□ -1.5
CD55-207ENST00000465534 LCE5AQ5TCM9 118 aa5.71□□□□□ -1.5
CD55-207ENST00000465534 FYB2Q5VWT5 728 aa5.71□□□□□ -1.5
CD55-207ENST00000465534 ASB11Q8WXH4 323 aa5.71□□□□□ -1.5
CD55-207ENST00000465534 HEXIM2Q96MH2 286 aaKnown RBP5.71□□□□□ -1.5
CD55-207ENST00000465534 PPP1R16BQ96T49 567 aa5.71□□□□□ -1.5
CD55-207ENST00000465534 SSU72Q9NP77 194 aaKnown RBP5.71□□□□□ -1.5
CD55-207ENST00000465534 CTNND2Q9UQB3 1225 aa5.71□□□□□ -1.5
CD55-207ENST00000465534 SNX11Q9Y5W9 270 aa5.71□□□□□ -1.5
CD55-207ENST00000465534 SYDE1Q6ZW31 735 aaPredicted RBP5.7□□□□□ -1.5
CD55-207ENST00000465534 ANKLE2Q86XL3 938 aa5.7□□□□□ -1.5
CD55-207ENST00000465534 ISL2Q96A47 359 aa5.7□□□□□ -1.5
CD55-207ENST00000465534 KRT82Q9NSB4 513 aa5.7□□□□□ -1.5
CD55-207ENST00000465534 ZSCAN22P10073 491 aaPredicted RBP5.69□□□□□ -1.5
CD55-207ENST00000465534 ORC1Q13415 861 aa5.69□□□□□ -1.5
CD55-207ENST00000465534 RPS26P11Q5JNZ5 115 aaPredicted RBP5.69□□□□□ -1.5
CD55-207ENST00000465534 PRR23BQ6ZRT6 265 aa5.69□□□□□ -1.5
CD55-207ENST00000465534 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.69□□□□□ -1.5
CD55-207ENST00000465534 KCNB2Q92953 911 aa5.69□□□□□ -1.5
CD55-207ENST00000465534 NCANO14594 1321 aa5.68□□□□□ -1.5
CD55-207ENST00000465534 TMEM238LA0A1B0GVL6 79 aa5.68□□□□□ -1.5
CD55-207ENST00000465534 PRRG2O14669 202 aa5.68□□□□□ -1.5
CD55-207ENST00000465534 CPNE3O75131 537 aaKnown RBP5.68□□□□□ -1.5
CD55-207ENST00000465534 NEFLP07196 543 aa5.68□□□□□ -1.5
CD55-207ENST00000465534 AFMP43652 599 aa5.68□□□□□ -1.5
CD55-207ENST00000465534 HNRNPUQ00839 825 aaKnown RBP eCLIP5.68□□□□□ -1.5
CD55-207ENST00000465534 ECM1Q16610 540 aa5.68□□□□□ -1.5
CD55-207ENST00000465534 PHLDB3Q6NSJ2 640 aa5.68□□□□□ -1.5
CD55-207ENST00000465534 PRPF40BQ6NWY9 871 aaKnown RBP5.68□□□□□ -1.5
CD55-207ENST00000465534 MPZL3Q6UWV2 235 aa5.68□□□□□ -1.5
CD55-207ENST00000465534 FAM214BQ7L5A3 538 aa5.68□□□□□ -1.5
CD55-207ENST00000465534 SIAH1Q8IUQ4 282 aa5.68□□□□□ -1.5
CD55-207ENST00000465534 SPACA3Q8IXA5 215 aa5.68□□□□□ -1.5
CD55-207ENST00000465534 LMCD1Q9NZU5 365 aa5.68□□□□□ -1.5
CD55-207ENST00000465534 SERPINA10Q9UK55 444 aa5.68□□□□□ -1.5
CD55-207ENST00000465534 BRPF3Q9ULD4 1205 aa5.68□□□□□ -1.5
CD55-207ENST00000465534 B8ZZF3 427 aa5.67□□□□□ -1.5
CD55-207ENST00000465534 GADD45BO75293 160 aaPredicted RBP5.67□□□□□ -1.5
CD55-207ENST00000465534 CHD1O14646 1710 aa5.67□□□□□ -1.5
CD55-207ENST00000465534 GLI1P08151 1106 aa5.66□□□□□ -1.5
CD55-207ENST00000465534 C1QTNF9P0C862 333 aa5.66□□□□□ -1.5
CD55-207ENST00000465534 NKPD1Q17RQ9 610 aa5.66□□□□□ -1.5
CD55-207ENST00000465534 PDZD3Q86UT5 571 aa5.66□□□□□ -1.5
CD55-207ENST00000465534 RNF214Q8ND24 703 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms