RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.67□□□□□ -1.34
SF3A3-202ENST00000460925 EVC2Q86UK5 1308 aa6.67□□□□□ -1.34
SF3A3-202ENST00000460925 ROBO1Q9Y6N7 1651 aa6.67□□□□□ -1.34
SF3A3-202ENST00000460925 MSH6P52701 1360 aa6.67□□□□□ -1.34
SF3A3-202ENST00000460925 PPIP5K1Q6PFW1 1433 aa6.67□□□□□ -1.34
SF3A3-202ENST00000460925 KIF20BQ96Q89 1820 aa6.66□□□□□ -1.34
SF3A3-202ENST00000460925 C1orf167Q5SNV9 1468 aa6.66□□□□□ -1.34
SF3A3-202ENST00000460925 CD163L1Q9NR16 1453 aa6.66□□□□□ -1.34
SF3A3-202ENST00000460925 TMEM238LA0A1B0GVL6 79 aa6.66□□□□□ -1.34
SF3A3-202ENST00000460925 ST8SIA5O15466 376 aa6.66□□□□□ -1.34
SF3A3-202ENST00000460925 PSAPP07602 524 aa6.66□□□□□ -1.34
SF3A3-202ENST00000460925 NFKB1P19838 968 aa6.66□□□□□ -1.34
SF3A3-202ENST00000460925 NRLP54845 237 aa6.66□□□□□ -1.34
SF3A3-202ENST00000460925 PLAURQ03405 335 aa6.66□□□□□ -1.34
SF3A3-202ENST00000460925 CNGB1Q14028 1251 aaPredicted RBP6.66□□□□□ -1.34
SF3A3-202ENST00000460925 KRT25Q7Z3Z0 450 aa6.66□□□□□ -1.34
SF3A3-202ENST00000460925 CEP120Q8N960 986 aa6.66□□□□□ -1.34
SF3A3-202ENST00000460925 PMFBP1Q8TBY8 1022 aa6.66□□□□□ -1.34
SF3A3-202ENST00000460925 PNMA5Q96PV4 448 aa6.66□□□□□ -1.34
SF3A3-202ENST00000460925 RSRP1Q9BUV0 290 aa6.66□□□□□ -1.34
SF3A3-202ENST00000460925 CAPN10Q9HC96 672 aa6.66□□□□□ -1.34
SF3A3-202ENST00000460925 ABCB6Q9NP58 842 aa6.66□□□□□ -1.34
SF3A3-202ENST00000460925 SOBPA7XYQ1 873 aa6.65□□□□□ -1.34
SF3A3-202ENST00000460925 ITGA6P23229 1130 aa6.65□□□□□ -1.34
SF3A3-202ENST00000460925 GJA8P48165 433 aa6.65□□□□□ -1.34
SF3A3-202ENST00000460925 TNNI2P48788 182 aa6.65□□□□□ -1.34
SF3A3-202ENST00000460925 MAP3K10Q02779 954 aa6.65□□□□□ -1.34
SF3A3-202ENST00000460925 DDX10Q13206 875 aaKnown RBP6.65□□□□□ -1.34
SF3A3-202ENST00000460925 ZNF837Q96EG3 531 aaPredicted RBP6.65□□□□□ -1.34
SF3A3-202ENST00000460925 CNTNAP3BQ96NU0 1288 aa6.65□□□□□ -1.34
SF3A3-202ENST00000460925 ORAI2Q96SN7 254 aa6.65□□□□□ -1.34
SF3A3-202ENST00000460925 SLC30A3Q99726 388 aa6.65□□□□□ -1.34
SF3A3-202ENST00000460925 CNTNAP3Q9BZ76 1288 aa6.65□□□□□ -1.34
SF3A3-202ENST00000460925 TANGO6Q9C0B7 1094 aa6.65□□□□□ -1.34
SF3A3-202ENST00000460925 SLC12A5Q9H2X9 1139 aa6.65□□□□□ -1.34
SF3A3-202ENST00000460925 PRKAG2Q9UGJ0 569 aa6.65□□□□□ -1.34
SF3A3-202ENST00000460925 DACH1Q9UI36 760 aa6.65□□□□□ -1.34
SF3A3-202ENST00000460925 INPP5FQ9Y2H2 1132 aa6.65□□□□□ -1.34
SF3A3-202ENST00000460925 PCDHGB7Q9Y5F8 929 aa6.65□□□□□ -1.34
SF3A3-202ENST00000460925 A0A1W2PP64 1363 aa6.65□□□□□ -1.35
SF3A3-202ENST00000460925 DCCP43146 1447 aa6.65□□□□□ -1.35
SF3A3-202ENST00000460925 KIF1AQ12756 1690 aa6.65□□□□□ -1.35
SF3A3-202ENST00000460925 TRPM3Q9HCF6 1732 aaPredicted RBP6.64□□□□□ -1.35
SF3A3-202ENST00000460925 MARF1Q9Y4F3 1742 aaKnown RBP6.64□□□□□ -1.35
SF3A3-202ENST00000460925 RLBP1P12271 317 aa6.64□□□□□ -1.35
SF3A3-202ENST00000460925 ITPKAP23677 461 aa6.64□□□□□ -1.35
SF3A3-202ENST00000460925 PWP1Q13610 501 aa6.64□□□□□ -1.35
SF3A3-202ENST00000460925 GRIN2CQ14957 1233 aa6.64□□□□□ -1.35
SF3A3-202ENST00000460925 COL13A1Q5TAT6 717 aaPredicted RBP6.64□□□□□ -1.35
SF3A3-202ENST00000460925 SV2BQ7L1I2 683 aa6.64□□□□□ -1.35
SF3A3-202ENST00000460925 DHX32Q7L7V1 743 aaKnown RBP6.64□□□□□ -1.35
SF3A3-202ENST00000460925 TRPM4Q8TD43 1214 aa6.64□□□□□ -1.35
SF3A3-202ENST00000460925 ABHD17AQ96GS6 310 aa6.64□□□□□ -1.35
SF3A3-202ENST00000460925 TRIM47Q96LD4 638 aa6.64□□□□□ -1.35
SF3A3-202ENST00000460925 ZKSCAN3Q9BRR0 538 aa6.64□□□□□ -1.35
SF3A3-202ENST00000460925 OXCT2Q9BYC2 517 aaPredicted RBP6.64□□□□□ -1.35
SF3A3-202ENST00000460925 BHLHE41Q9C0J9 482 aaPredicted RBP6.64□□□□□ -1.35
SF3A3-202ENST00000460925 C19orf44Q9H6X5 657 aa6.64□□□□□ -1.35
SF3A3-202ENST00000460925 LIN7BQ9HAP6 207 aa6.64□□□□□ -1.35
SF3A3-202ENST00000460925 DZANK1Q9NVP4 752 aa6.64□□□□□ -1.35
SF3A3-202ENST00000460925 PHF24Q9UPV7 400 aa6.64□□□□□ -1.35
SF3A3-202ENST00000460925 ANKARQ7Z5J8 1434 aa6.64□□□□□ -1.35
SF3A3-202ENST00000460925 NHSL1Q5SYE7 1610 aa6.64□□□□□ -1.35
SF3A3-202ENST00000460925 PIK3C2AO00443 1686 aa6.64□□□□□ -1.35
SF3A3-202ENST00000460925 NFKBIEO00221 500 aa6.63□□□□□ -1.35
SF3A3-202ENST00000460925 PHLPP1O60346 1717 aa6.63□□□□□ -1.35
SF3A3-202ENST00000460925 ATF3P18847 181 aa6.63□□□□□ -1.35
SF3A3-202ENST00000460925 FCGRTP55899 365 aa6.63□□□□□ -1.35
SF3A3-202ENST00000460925 PIP4K2BP78356 416 aa6.63□□□□□ -1.35
SF3A3-202ENST00000460925 GPLD1P80108 840 aa6.63□□□□□ -1.35
SF3A3-202ENST00000460925 NCAPG2Q86XI2 1143 aa6.63□□□□□ -1.35
SF3A3-202ENST00000460925 TMEM102Q8N9M5 508 aaPredicted RBP6.63□□□□□ -1.35
SF3A3-202ENST00000460925 CCDC136Q96JN2 1154 aa6.63□□□□□ -1.35
SF3A3-202ENST00000460925 OSMRQ99650 979 aa6.63□□□□□ -1.35
SF3A3-202ENST00000460925 NSD3Q9BZ95 1437 aa6.63□□□□□ -1.35
SF3A3-202ENST00000460925 TTF2Q9UNY4 1162 aaKnown RBP6.63□□□□□ -1.35
SF3A3-202ENST00000460925 ANKRD26Q9UPS8 1709 aa6.63□□□□□ -1.35
SF3A3-202ENST00000460925 NCOA3Q9Y6Q9 1424 aa6.63□□□□□ -1.35
SF3A3-202ENST00000460925 ALS2Q96Q42 1657 aa6.62□□□□□ -1.35
SF3A3-202ENST00000460925 ACEP12821 1306 aa6.62□□□□□ -1.35
SF3A3-202ENST00000460925 CD33P20138 364 aa6.62□□□□□ -1.35
SF3A3-202ENST00000460925 FGFR3P22607 806 aa6.62□□□□□ -1.35
SF3A3-202ENST00000460925 ARID5AQ03989 594 aa6.62□□□□□ -1.35
SF3A3-202ENST00000460925 PCSK7Q16549 785 aa6.62□□□□□ -1.35
SF3A3-202ENST00000460925 RPS26P11Q5JNZ5 115 aaPredicted RBP6.62□□□□□ -1.35
SF3A3-202ENST00000460925 DTHD1Q6ZMT9 781 aa6.62□□□□□ -1.35
SF3A3-202ENST00000460925 BRINP3Q76B58 766 aa6.62□□□□□ -1.35
SF3A3-202ENST00000460925 RASGRP4Q8TDF6 673 aa6.62□□□□□ -1.35
SF3A3-202ENST00000460925 BHMTQ93088 406 aa6.62□□□□□ -1.35
SF3A3-202ENST00000460925 PUS7Q96PZ0 661 aaKnown RBP6.62□□□□□ -1.35
SF3A3-202ENST00000460925 COPRSQ9NQ92 184 aa6.62□□□□□ -1.35
SF3A3-202ENST00000460925 KCNQ5Q9NR82 932 aa6.62□□□□□ -1.35
SF3A3-202ENST00000460925 KBTBD4Q9NVX7 518 aa6.62□□□□□ -1.35
SF3A3-202ENST00000460925 BCCIPQ9P287 314 aaKnown RBP eCLIP6.62□□□□□ -1.35
SF3A3-202ENST00000460925 ABCA3Q99758 1704 aa6.62□□□□□ -1.35
SF3A3-202ENST00000460925 USP6P35125 1406 aa6.61□□□□□ -1.35
SF3A3-202ENST00000460925 CPSF1Q10570 1443 aaKnown RBP6.61□□□□□ -1.35
SF3A3-202ENST00000460925 ANKRD36BQ8N2N9 1353 aa6.61□□□□□ -1.35
SF3A3-202ENST00000460925 ATP2B1P20020 1258 aa6.61□□□□□ -1.35
SF3A3-202ENST00000460925 CCDC85BQ15834 202 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms