RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 RAI14Q9P0K7 980 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 ESYT3A0FGR9 886 aa9.17□□□□□ -0.94
BRCC3-208ENST00000453705 NUCB1Q02818 461 aa9.17□□□□□ -0.94
BRCC3-208ENST00000453705 CCDC30Q5VVM6 783 aa9.17□□□□□ -0.94
BRCC3-208ENST00000453705 IL31Q6EBC2 164 aa9.17□□□□□ -0.94
BRCC3-208ENST00000453705 CAPN12Q6ZSI9 719 aa9.17□□□□□ -0.94
BRCC3-208ENST00000453705 RPAP2Q8IXW5 612 aaPredicted RBP9.17□□□□□ -0.94
BRCC3-208ENST00000453705 FRMD6Q96NE9 622 aa9.17□□□□□ -0.94
BRCC3-208ENST00000453705 C9orf78Q9NZ63 289 aaPredicted RBP9.17□□□□□ -0.94
BRCC3-208ENST00000453705 TSPYL4Q9UJ04 414 aa9.17□□□□□ -0.94
BRCC3-208ENST00000453705 SPG7Q9UQ90 795 aa9.17□□□□□ -0.94
BRCC3-208ENST00000453705 KDM6AO15550 1401 aaPredicted RBP9.17□□□□□ -0.94
BRCC3-208ENST00000453705 CCDC163A0A0D9SF12 145 aa9.17□□□□□ -0.94
BRCC3-208ENST00000453705 FIBPO43427 364 aa9.17□□□□□ -0.94
BRCC3-208ENST00000453705 TSPAN7P41732 249 aa9.17□□□□□ -0.94
BRCC3-208ENST00000453705 SERINC3Q13530 473 aa9.17□□□□□ -0.94
BRCC3-208ENST00000453705 SH3TC2Q8TF17 1288 aa9.17□□□□□ -0.94
BRCC3-208ENST00000453705 ARFGEF2Q9Y6D5 1785 aa9.17□□□□□ -0.94
BRCC3-208ENST00000453705 RREB1Q92766 1687 aa9.16□□□□□ -0.94
BRCC3-208ENST00000453705 A0A1W2PRQ8 180 aa9.16□□□□□ -0.94
BRCC3-208ENST00000453705 IPO5O00410 1097 aaKnown RBP9.16□□□□□ -0.94
BRCC3-208ENST00000453705 RNMTO43148 476 aaKnown RBP9.16□□□□□ -0.94
BRCC3-208ENST00000453705 CDC45O75419 566 aa9.16□□□□□ -0.94
BRCC3-208ENST00000453705 NEK3P51956 506 aa9.16□□□□□ -0.94
BRCC3-208ENST00000453705 ARHGAP4P98171 946 aa9.16□□□□□ -0.94
BRCC3-208ENST00000453705 IFT88Q13099 833 aa9.16□□□□□ -0.94
BRCC3-208ENST00000453705 DCTN1Q14203 1278 aa9.16□□□□□ -0.94
BRCC3-208ENST00000453705 MSL1Q68DK7 614 aa9.16□□□□□ -0.94
BRCC3-208ENST00000453705 ITPRIPQ8IWB1 547 aa9.16□□□□□ -0.94
BRCC3-208ENST00000453705 LMNTD2Q8IXW0 634 aa9.16□□□□□ -0.94
BRCC3-208ENST00000453705 TEX19Q8NA77 164 aa9.16□□□□□ -0.94
BRCC3-208ENST00000453705 UHMK1Q8TAS1 419 aaKnown RBP9.16□□□□□ -0.94
BRCC3-208ENST00000453705 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.16□□□□□ -0.942e-6■■■■□ 23.3
BRCC3-208ENST00000453705 CHMP3Q9Y3E7 222 aa9.16□□□□□ -0.94
BRCC3-208ENST00000453705 COL15A1P39059 1388 aa9.16□□□□□ -0.94
BRCC3-208ENST00000453705 ELL2O00472 640 aaPredicted RBP9.16□□□□□ -0.94
BRCC3-208ENST00000453705 POU3F3P20264 500 aaPredicted RBP9.16□□□□□ -0.94
BRCC3-208ENST00000453705 MASP1P48740 699 aa9.16□□□□□ -0.94
BRCC3-208ENST00000453705 EIF4A1P60842 406 aaKnown RBP9.16□□□□□ -0.94
BRCC3-208ENST00000453705 ANO1Q5XXA6 986 aa9.16□□□□□ -0.94
BRCC3-208ENST00000453705 TNS2Q63HR2 1409 aa9.16□□□□□ -0.94
BRCC3-208ENST00000453705 GLYCTKQ8IVS8 523 aa9.16□□□□□ -0.94
BRCC3-208ENST00000453705 ANKRD44Q8N8A2 993 aa9.16□□□□□ -0.94
BRCC3-208ENST00000453705 GPR101Q96P66 508 aaPredicted RBP9.16□□□□□ -0.94
BRCC3-208ENST00000453705 RANBP17Q9H2T7 1088 aaKnown RBP9.16□□□□□ -0.94
BRCC3-208ENST00000453705 ITGB4P16144 1822 aa9.15□□□□□ -0.94
BRCC3-208ENST00000453705 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.15□□□□□ -0.94
BRCC3-208ENST00000453705 DISP2A7MBM2 1401 aa9.15□□□□□ -0.94
BRCC3-208ENST00000453705 AGR2O95994 175 aa9.15□□□□□ -0.94
BRCC3-208ENST00000453705 RAB27AP51159 221 aa9.15□□□□□ -0.94
BRCC3-208ENST00000453705 UBE2Q1Q7Z7E8 422 aa9.15□□□□□ -0.94
BRCC3-208ENST00000453705 LRRC59Q96AG4 307 aaKnown RBP9.15□□□□□ -0.94
BRCC3-208ENST00000453705 TSPYL2Q9H2G4 693 aaPredicted RBP9.15□□□□□ -0.94
BRCC3-208ENST00000453705 CNTN3Q9P232 1028 aa9.15□□□□□ -0.94
BRCC3-208ENST00000453705 PCDH10Q9P2E7 1040 aa9.15□□□□□ -0.94
BRCC3-208ENST00000453705 OAS2P29728 719 aaKnown RBP9.15□□□□□ -0.95
BRCC3-208ENST00000453705 HOXC13P31276 330 aa9.15□□□□□ -0.95
BRCC3-208ENST00000453705 GNL2Q13823 731 aaKnown RBP9.15□□□□□ -0.95
BRCC3-208ENST00000453705 TAF11Q15544 211 aa9.15□□□□□ -0.95
BRCC3-208ENST00000453705 IPCEF1Q8WWN9 437 aaPredicted RBP9.15□□□□□ -0.95
BRCC3-208ENST00000453705 EIF2AK1Q9BQI3 630 aaKnown RBP9.15□□□□□ -0.95
BRCC3-208ENST00000453705 RHOBTB3O94955 611 aa9.14□□□□□ -0.95
BRCC3-208ENST00000453705 HSP90AB1P08238 724 aaKnown RBP9.14□□□□□ -0.95
BRCC3-208ENST00000453705 NOS2P35228 1153 aa9.14□□□□□ -0.95
BRCC3-208ENST00000453705 PTGDRQ13258 359 aa9.14□□□□□ -0.95
BRCC3-208ENST00000453705 PLPP6Q8IY26 295 aa9.14□□□□□ -0.95
BRCC3-208ENST00000453705 TIFAQ96CG3 184 aa9.14□□□□□ -0.95
BRCC3-208ENST00000453705 CDHR1Q96JP9 859 aa9.14□□□□□ -0.95
BRCC3-208ENST00000453705 DCTPP1Q9H773 170 aa9.14□□□□□ -0.95
BRCC3-208ENST00000453705 NDUFB9Q9Y6M9 179 aa9.14□□□□□ -0.95
BRCC3-208ENST00000453705 KCPQ6ZWJ8 1503 aa9.14□□□□□ -0.95
BRCC3-208ENST00000453705 UBAP1LF5GYI3 381 aa9.14□□□□□ -0.95
BRCC3-208ENST00000453705 ATP9BO43861 1147 aa9.14□□□□□ -0.95
BRCC3-208ENST00000453705 TNFAIP3P21580 790 aa9.14□□□□□ -0.95
BRCC3-208ENST00000453705 C21orf62-AS1Q17RA5 79 aa9.14□□□□□ -0.95
BRCC3-208ENST00000453705 ZNF713Q8N859 430 aaPredicted RBP9.14□□□□□ -0.95
BRCC3-208ENST00000453705 VMP1Q96GC9 406 aa9.14□□□□□ -0.95
BRCC3-208ENST00000453705 RIC8AQ9NPQ8 531 aa9.14□□□□□ -0.95
BRCC3-208ENST00000453705 TYW1Q9NV66 732 aaKnown RBP9.14□□□□□ -0.95
BRCC3-208ENST00000453705 ZIM2Q9NZV7 527 aa9.14□□□□□ -0.95
BRCC3-208ENST00000453705 AXIN2Q9Y2T1 843 aa9.14□□□□□ -0.95
BRCC3-208ENST00000453705 WDR17Q8IZU2 1322 aa9.14□□□□□ -0.95
BRCC3-208ENST00000453705 AFDNP55196 1824 aaKnown RBP9.13□□□□□ -0.95
BRCC3-208ENST00000453705 EXOSC10Q01780 885 aaKnown RBP9.13□□□□□ -0.95
BRCC3-208ENST00000453705 DGKHQ86XP1 1220 aa9.13□□□□□ -0.95
BRCC3-208ENST00000453705 SPICE1Q8N0Z3 855 aa9.13□□□□□ -0.95
BRCC3-208ENST00000453705 ANKRD42Q8N9B4 389 aa9.13□□□□□ -0.95
BRCC3-208ENST00000453705 DCTN4Q9UJW0 460 aa9.13□□□□□ -0.95
BRCC3-208ENST00000453705 ERBB4Q15303 1308 aa9.13□□□□□ -0.95
BRCC3-208ENST00000453705 SPDYE16A6NNV3 312 aaPredicted RBP9.13□□□□□ -0.95
BRCC3-208ENST00000453705 RPN1P04843 607 aaKnown RBP9.13□□□□□ -0.95
BRCC3-208ENST00000453705 PIK3CAP42336 1068 aa9.13□□□□□ -0.95
BRCC3-208ENST00000453705 CHMP4BP1P59074 171 aa9.13□□□□□ -0.95
BRCC3-208ENST00000453705 ELOAQ14241 798 aaKnown RBP9.13□□□□□ -0.95
BRCC3-208ENST00000453705 ZNF530Q6P9A1 599 aaPredicted RBP9.13□□□□□ -0.95
BRCC3-208ENST00000453705 TTC8Q8TAM2 541 aa9.13□□□□□ -0.95
BRCC3-208ENST00000453705 GOLGA1Q92805 767 aa9.13□□□□□ -0.95
BRCC3-208ENST00000453705 SH3KBP1Q96B97 665 aa9.13□□□□□ -0.95
BRCC3-208ENST00000453705 VTI1BQ9UEU0 232 aa9.13□□□□□ -0.95
BRCC3-208ENST00000453705 ZNF131P52739 623 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms