RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 STK36Q9NRP7 1315 aa18.36■□□□□ 0.53
HOXD3-202ENST00000410016 ARAP2Q8WZ64 1704 aa18.36■□□□□ 0.53
HOXD3-202ENST00000410016 FMNL1O95466 1100 aaPredicted RBP18.36■□□□□ 0.53
HOXD3-202ENST00000410016 IFNAR1P17181 557 aa18.36■□□□□ 0.53
HOXD3-202ENST00000410016 GSDMDP57764 484 aa18.36■□□□□ 0.53
HOXD3-202ENST00000410016 RESP18Q5W5W9 173 aa18.36■□□□□ 0.53
HOXD3-202ENST00000410016 LCORLQ8N3X6 602 aa18.36■□□□□ 0.53
HOXD3-202ENST00000410016 JMYQ8N9B5 988 aa18.36■□□□□ 0.53
HOXD3-202ENST00000410016 CLIC6Q96NY7 704 aa18.36■□□□□ 0.53
HOXD3-202ENST00000410016 PNPLA7Q6ZV29 1317 aa18.36■□□□□ 0.53
HOXD3-202ENST00000410016 NID2Q14112 1375 aa18.36■□□□□ 0.53
HOXD3-202ENST00000410016 MFSD6Q6ZSS7 791 aa18.35■□□□□ 0.53
HOXD3-202ENST00000410016 STAG1Q8WVM7 1258 aa18.35■□□□□ 0.53
HOXD3-202ENST00000410016 SLC26A6Q9BXS9 759 aa18.35■□□□□ 0.53
HOXD3-202ENST00000410016 KRT23Q9C075 422 aa18.35■□□□□ 0.53
HOXD3-202ENST00000410016 IFNKQ9P0W0 207 aa18.35■□□□□ 0.53
HOXD3-202ENST00000410016 IKBKBO14920 756 aa18.35■□□□□ 0.53
HOXD3-202ENST00000410016 CAMTA2O94983 1202 aa18.35■□□□□ 0.53
HOXD3-202ENST00000410016 GUCY1A2P33402 732 aa18.35■□□□□ 0.53
HOXD3-202ENST00000410016 SSRP1Q08945 709 aaKnown RBP18.35■□□□□ 0.53
HOXD3-202ENST00000410016 ARID3AQ99856 593 aa18.35■□□□□ 0.53
HOXD3-202ENST00000410016 CCDC87Q9NVE4 849 aa18.35■□□□□ 0.53
HOXD3-202ENST00000410016 CRKLP46109 303 aaKnown RBP18.34■□□□□ 0.53
HOXD3-202ENST00000410016 GNL2Q13823 731 aaKnown RBP18.34■□□□□ 0.53
HOXD3-202ENST00000410016 TRIM29Q14134 588 aa18.34■□□□□ 0.53
HOXD3-202ENST00000410016 CEP135Q66GS9 1140 aa18.34■□□□□ 0.53
HOXD3-202ENST00000410016 DOCK2Q92608 1830 aa18.34■□□□□ 0.53
HOXD3-202ENST00000410016 GNAT2P19087 354 aa18.34■□□□□ 0.53
HOXD3-202ENST00000410016 ISM2Q6H9L7 571 aa18.34■□□□□ 0.53
HOXD3-202ENST00000410016 FOXP4Q8IVH2 680 aaPredicted RBP18.34■□□□□ 0.53
HOXD3-202ENST00000410016 CCAR2Q8N163 923 aaKnown RBP18.34■□□□□ 0.53
HOXD3-202ENST00000410016 TAOK2Q9UL54 1235 aa18.34■□□□□ 0.53
HOXD3-202ENST00000410016 COL14A1Q05707 1796 aaKnown RBP18.34■□□□□ 0.53
HOXD3-202ENST00000410016 CUTAO60888 179 aa18.33■□□□□ 0.53
HOXD3-202ENST00000410016 TOB1P50616 345 aaPredicted RBP18.33■□□□□ 0.53
HOXD3-202ENST00000410016 CCDC152Q4G0S7 254 aa18.33■□□□□ 0.53
HOXD3-202ENST00000410016 ARMCX5Q6P1M9 558 aa18.33■□□□□ 0.53
HOXD3-202ENST00000410016 NOSTRINQ8IVI9 506 aa18.33■□□□□ 0.53
HOXD3-202ENST00000410016 SLC4A4Q9Y6R1 1079 aa18.33■□□□□ 0.53
HOXD3-202ENST00000410016 RTL9Q8NET4 1388 aa18.33■□□□□ 0.52
HOXD3-202ENST00000410016 BTBD18B2RXH4 712 aa18.33■□□□□ 0.52
HOXD3-202ENST00000410016 NCBP1Q09161 790 aaKnown RBP18.33■□□□□ 0.52
HOXD3-202ENST00000410016 SYCP1Q15431 976 aa18.33■□□□□ 0.52
HOXD3-202ENST00000410016 LONRF3Q496Y0 759 aa18.33■□□□□ 0.52
HOXD3-202ENST00000410016 PARP10Q53GL7 1025 aa18.33■□□□□ 0.52
HOXD3-202ENST00000410016 SMC2O95347 1197 aa18.32■□□□□ 0.52
HOXD3-202ENST00000410016 NTSR2O95665 410 aa18.32■□□□□ 0.52
HOXD3-202ENST00000410016 MMP1P03956 469 aa18.32■□□□□ 0.52
HOXD3-202ENST00000410016 PNOCQ13519 176 aa18.32■□□□□ 0.52
HOXD3-202ENST00000410016 PTPN14Q15678 1187 aa18.32■□□□□ 0.52
HOXD3-202ENST00000410016 METTL16Q86W50 562 aaKnown RBP18.32■□□□□ 0.52
HOXD3-202ENST00000410016 ZKSCAN3Q9BRR0 538 aa18.32■□□□□ 0.52
HOXD3-202ENST00000410016 NACAP1Q9BZK3 213 aa18.32■□□□□ 0.52
HOXD3-202ENST00000410016 TIAM2Q8IVF5 1701 aa18.32■□□□□ 0.52
HOXD3-202ENST00000410016 ATP6V1AP38606 617 aa18.32■□□□□ 0.52
HOXD3-202ENST00000410016 TDO2P48775 406 aa18.32■□□□□ 0.52
HOXD3-202ENST00000410016 STK11IPQ8N1F8 1099 aa18.32■□□□□ 0.52
HOXD3-202ENST00000410016 CCDC112Q8NEF3 446 aa18.32■□□□□ 0.52
HOXD3-202ENST00000410016 MTA3Q9BTC8 594 aa18.32■□□□□ 0.52
HOXD3-202ENST00000410016 TRMT1Q9NXH9 659 aaKnown RBP18.32■□□□□ 0.52
HOXD3-202ENST00000410016 KCNH3Q9ULD8 1083 aa18.32■□□□□ 0.52
HOXD3-202ENST00000410016 ATP1A3P13637 1013 aa18.31■□□□□ 0.52
HOXD3-202ENST00000410016 LMOD1P29536 600 aaPredicted RBP18.31■□□□□ 0.52
HOXD3-202ENST00000410016 IGHMBP2P38935 993 aaKnown RBP18.31■□□□□ 0.52
HOXD3-202ENST00000410016 CHRNDQ07001 517 aa18.31■□□□□ 0.52
HOXD3-202ENST00000410016 RRP12Q5JTH9 1297 aaKnown RBP18.31■□□□□ 0.52
HOXD3-202ENST00000410016 PDCL2Q8N4E4 241 aa18.31■□□□□ 0.52
HOXD3-202ENST00000410016 MIGA1Q8NAN2 632 aa18.31■□□□□ 0.52
HOXD3-202ENST00000410016 WASF1Q92558 559 aa18.31■□□□□ 0.52
HOXD3-202ENST00000410016 PLCH1Q4KWH8 1693 aa18.31■□□□□ 0.52
HOXD3-202ENST00000410016 FANCCQ00597 558 aa18.31■□□□□ 0.52
HOXD3-202ENST00000410016 MDM2Q00987 491 aaPredicted RBP18.31■□□□□ 0.52
HOXD3-202ENST00000410016 ITPK1Q13572 414 aa18.31■□□□□ 0.52
HOXD3-202ENST00000410016 WTAPQ15007 396 aa18.31■□□□□ 0.52
HOXD3-202ENST00000410016 RTN1Q16799 776 aa18.31■□□□□ 0.52
HOXD3-202ENST00000410016 E4F1Q66K89 784 aaPredicted RBP18.31■□□□□ 0.52
HOXD3-202ENST00000410016 KRBA2Q6ZNG9 492 aa18.31■□□□□ 0.52
HOXD3-202ENST00000410016 TMC6Q7Z403 805 aa18.31■□□□□ 0.52
HOXD3-202ENST00000410016 ADGRA1Q86SQ6 560 aa18.31■□□□□ 0.52
HOXD3-202ENST00000410016 CRACR2BQ8N4Y2 399 aaPredicted RBP18.31■□□□□ 0.52
HOXD3-202ENST00000410016 LOC102724428A0A0B4J2F2 783 aa18.3■□□□□ 0.52
HOXD3-202ENST00000410016 SIK1P57059 783 aa18.3■□□□□ 0.52
HOXD3-202ENST00000410016 TPM4P67936 248 aa18.3■□□□□ 0.52
HOXD3-202ENST00000410016 PPP4R3BQ5MIZ7 849 aa18.3■□□□□ 0.52
HOXD3-202ENST00000410016 DIS3L2Q8IYB7 885 aaKnown RBP18.3■□□□□ 0.52
HOXD3-202ENST00000410016 ELOA2Q8IYF1 753 aaPredicted RBP18.3■□□□□ 0.52
HOXD3-202ENST00000410016 KRI1Q8N9T8 703 aaKnown RBP18.3■□□□□ 0.52
HOXD3-202ENST00000410016 LRP2BPQ9P2M1 347 aa18.3■□□□□ 0.52
HOXD3-202ENST00000410016 KCNJ14Q9UNX9 436 aa18.3■□□□□ 0.52
HOXD3-202ENST00000410016 NIP7Q9Y221 180 aaKnown RBP eCLIP18.3■□□□□ 0.52
HOXD3-202ENST00000410016 ECM29Q5VYK3 1845 aa18.3■□□□□ 0.52
HOXD3-202ENST00000410016 BCL9LQ86UU0 1499 aa18.3■□□□□ 0.52
HOXD3-202ENST00000410016 SART3Q15020 963 aaKnown RBP18.3■□□□□ 0.52
HOXD3-202ENST00000410016 TMTC2Q8N394 836 aa18.3■□□□□ 0.52
HOXD3-202ENST00000410016 CCDC150Q8NCX0 1101 aa18.3■□□□□ 0.52
HOXD3-202ENST00000410016 FOXP1Q9H334 677 aaPredicted RBP18.3■□□□□ 0.52
HOXD3-202ENST00000410016 PCDHA5Q9Y5H7 936 aa18.3■□□□□ 0.52
HOXD3-202ENST00000410016 BMP6P22004 513 aa18.29■□□□□ 0.52
HOXD3-202ENST00000410016 RCAN1P53805 252 aa18.29■□□□□ 0.52
HOXD3-202ENST00000410016 CMTR1Q8N1G2 835 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms