RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 H2AFB1P0C5Y9 115 aa6.75□□□□□ -1.33
LSM5-205ENST00000409952 H2AFB2P0C5Z0 115 aa6.75□□□□□ -1.33
LSM5-205ENST00000409952 CHMP4BP1P59074 171 aa6.75□□□□□ -1.33
LSM5-205ENST00000409952 PRPF40BQ6NWY9 871 aaKnown RBP6.75□□□□□ -1.33
LSM5-205ENST00000409952 KLHDC7BQ96G42 594 aa6.75□□□□□ -1.33
LSM5-205ENST00000409952 MAGEC2Q9UBF1 373 aaPredicted RBP6.75□□□□□ -1.33
LSM5-205ENST00000409952 ADAMTS1Q9UHI8 967 aa6.75□□□□□ -1.33
LSM5-205ENST00000409952 MRVI1Q9Y6F6 885 aa6.75□□□□□ -1.33
LSM5-205ENST00000409952 SOX1O00570 391 aaPredicted RBP6.74□□□□□ -1.33
LSM5-205ENST00000409952 WISP1O95388 367 aa6.74□□□□□ -1.33
LSM5-205ENST00000409952 ESRRAP11474 423 aaPredicted RBP6.74□□□□□ -1.33
LSM5-205ENST00000409952 ITPKAP23677 461 aa6.74□□□□□ -1.33
LSM5-205ENST00000409952 GRIA4P48058 902 aa6.74□□□□□ -1.33
LSM5-205ENST00000409952 IREB2P48200 963 aaKnown RBP6.74□□□□□ -1.33
LSM5-205ENST00000409952 SOX9P48436 509 aa6.74□□□□□ -1.33
LSM5-205ENST00000409952 CABP4P57796 275 aa6.74□□□□□ -1.33
LSM5-205ENST00000409952 COL9A2Q14055 689 aaPredicted RBP6.74□□□□□ -1.33
LSM5-205ENST00000409952 ARSHQ5FYA8 562 aa6.74□□□□□ -1.33
LSM5-205ENST00000409952 FAM117BQ6P1L5 589 aa6.74□□□□□ -1.33
LSM5-205ENST00000409952 NXPE4Q6UWF7 544 aa6.74□□□□□ -1.33
LSM5-205ENST00000409952 FAM9AQ8IZU1 332 aaPredicted RBP6.74□□□□□ -1.33
LSM5-205ENST00000409952 HNRNPLLQ8WVV9 542 aaKnown RBP6.74□□□□□ -1.33
LSM5-205ENST00000409952 MEGF10Q96KG7 1140 aa6.74□□□□□ -1.33
LSM5-205ENST00000409952 CARD10Q9BWT7 1032 aa6.74□□□□□ -1.33
LSM5-205ENST00000409952 BCO2Q9BYV7 579 aa6.74□□□□□ -1.33
LSM5-205ENST00000409952 AKTIPQ9H8T0 292 aa6.74□□□□□ -1.33
LSM5-205ENST00000409952 NPHS2Q9NP85 383 aa6.74□□□□□ -1.33
LSM5-205ENST00000409952 GINM1Q9NU53 330 aa6.74□□□□□ -1.33
LSM5-205ENST00000409952 FANCLQ9NW38 375 aa6.74□□□□□ -1.33
LSM5-205ENST00000409952 A0A096LPE4 126 aa6.73□□□□□ -1.33
LSM5-205ENST00000409952 CCDC194A0A1B0GVG4 234 aa6.73□□□□□ -1.33
LSM5-205ENST00000409952 A0A1W2PPZ6 126 aa6.73□□□□□ -1.33
LSM5-205ENST00000409952 FAM221BA6H8Z2 402 aa6.73□□□□□ -1.33
LSM5-205ENST00000409952 METTL12A8MUP2 240 aa6.73□□□□□ -1.33
LSM5-205ENST00000409952 AMPD3Q01432 767 aa6.73□□□□□ -1.33
LSM5-205ENST00000409952 HGSNATQ68CP4 663 aa6.73□□□□□ -1.33
LSM5-205ENST00000409952 KIAA1211Q6ZU35 1233 aa6.73□□□□□ -1.33
LSM5-205ENST00000409952 RELL1Q8IUW5 271 aa6.73□□□□□ -1.33
LSM5-205ENST00000409952 EXOC8Q8IYI6 725 aa6.73□□□□□ -1.33
LSM5-205ENST00000409952 SH3TC2Q8TF17 1288 aa6.73□□□□□ -1.33
LSM5-205ENST00000409952 STAG1Q8WVM7 1258 aa6.73□□□□□ -1.33
LSM5-205ENST00000409952 APPBP2Q92624 585 aa6.73□□□□□ -1.33
LSM5-205ENST00000409952 NRSN2Q9GZP1 204 aa6.73□□□□□ -1.33
LSM5-205ENST00000409952 LIN7BQ9HAP6 207 aa6.73□□□□□ -1.33
LSM5-205ENST00000409952 TYW1Q9NV66 732 aaKnown RBP6.73□□□□□ -1.33
LSM5-205ENST00000409952 PRKAG3Q9UGI9 489 aa6.73□□□□□ -1.33
LSM5-205ENST00000409952 TTF2Q9UNY4 1162 aaKnown RBP6.73□□□□□ -1.33
LSM5-205ENST00000409952 R3HCC1Q9Y3T6 440 aaKnown RBP6.73□□□□□ -1.33
LSM5-205ENST00000409952 DDX3YO15523 660 aaKnown RBP6.72□□□□□ -1.33
LSM5-205ENST00000409952 DYRK3O43781 588 aa6.72□□□□□ -1.33
LSM5-205ENST00000409952 MAP4K4O95819 1239 aaPredicted RBP6.72□□□□□ -1.33
LSM5-205ENST00000409952 CDC25BP30305 580 aa6.72□□□□□ -1.33
LSM5-205ENST00000409952 GSTT1P30711 240 aa6.72□□□□□ -1.33
LSM5-205ENST00000409952 EIF4A3P38919 411 aaKnown RBP6.72□□□□□ -1.33
LSM5-205ENST00000409952 C19orf57Q0VDD7 668 aa6.72□□□□□ -1.33
LSM5-205ENST00000409952 TAF7LQ5H9L4 462 aa6.72□□□□□ -1.33
LSM5-205ENST00000409952 GLIS3Q8NEA6 775 aa6.72□□□□□ -1.33
LSM5-205ENST00000409952 ZNF526Q8TF50 670 aaPredicted RBP6.72□□□□□ -1.33
LSM5-205ENST00000409952 EAF1Q96JC9 268 aaPredicted RBP6.72□□□□□ -1.33
LSM5-205ENST00000409952 SEMA6BQ9H3T3 888 aa6.72□□□□□ -1.33
LSM5-205ENST00000409952 FAM177BA6PVY3 158 aa6.71□□□□□ -1.34
LSM5-205ENST00000409952 GADD45BO75293 160 aaPredicted RBP6.71□□□□□ -1.34
LSM5-205ENST00000409952 ALX3O95076 343 aa6.71□□□□□ -1.34
LSM5-205ENST00000409952 IKBKEQ14164 716 aa6.71□□□□□ -1.34
LSM5-205ENST00000409952 ZNF423Q2M1K9 1284 aa6.71□□□□□ -1.34
LSM5-205ENST00000409952 SPRED3Q2MJR0 410 aa6.71□□□□□ -1.34
LSM5-205ENST00000409952 KIAA0907Q7Z7F0 614 aaPredicted RBP6.71□□□□□ -1.34
LSM5-205ENST00000409952 HOMER1Q86YM7 354 aa6.71□□□□□ -1.34
LSM5-205ENST00000409952 MORC4Q8TE76 937 aa6.71□□□□□ -1.34
LSM5-205ENST00000409952 CPLX3Q8WVH0 158 aa6.71□□□□□ -1.34
LSM5-205ENST00000409952 TMEM74Q96NL1 305 aa6.71□□□□□ -1.34
LSM5-205ENST00000409952 CLEC4MQ9H2X3 399 aaPredicted RBP6.71□□□□□ -1.34
LSM5-205ENST00000409952 ABCB6Q9NP58 842 aa6.71□□□□□ -1.34
LSM5-205ENST00000409952 G3BP2Q9UN86 482 aaKnown RBP6.71□□□□□ -1.34
LSM5-205ENST00000409952 MEGF11A6BM72 1044 aa6.7□□□□□ -1.34
LSM5-205ENST00000409952 EIF4EBP3O60516 100 aaPredicted RBP6.7□□□□□ -1.34
LSM5-205ENST00000409952 PDGFRBP09619 1106 aa6.7□□□□□ -1.34
LSM5-205ENST00000409952 GBP2P32456 591 aaPredicted RBP6.7□□□□□ -1.34
LSM5-205ENST00000409952 GRM2Q14416 872 aa6.7□□□□□ -1.34
LSM5-205ENST00000409952 ASAP3Q8TDY4 903 aa6.7□□□□□ -1.34
LSM5-205ENST00000409952 UBASH3BQ8TF42 649 aa6.7□□□□□ -1.34
LSM5-205ENST00000409952 ZNF296Q8WUU4 475 aaPredicted RBP6.7□□□□□ -1.34
LSM5-205ENST00000409952 ANAPC16Q96DE5 110 aa6.7□□□□□ -1.34
LSM5-205ENST00000409952 UBL7Q96S82 380 aaPredicted RBP6.7□□□□□ -1.34
LSM5-205ENST00000409952 NT5C1AQ9BXI3 368 aa6.7□□□□□ -1.34
LSM5-205ENST00000409952 CCDC113Q9H0I3 377 aa6.7□□□□□ -1.34
LSM5-205ENST00000409952 ZNF576Q9H609 170 aa6.7□□□□□ -1.34
LSM5-205ENST00000409952 MSRB2Q9Y3D2 182 aa6.7□□□□□ -1.34
LSM5-205ENST00000409952 ESYT3A0FGR9 886 aa6.69□□□□□ -1.34
LSM5-205ENST00000409952 CCDC85CA6NKD9 419 aa6.69□□□□□ -1.34
LSM5-205ENST00000409952 MINDY4BA8MYZ0 360 aa6.69□□□□□ -1.34
LSM5-205ENST00000409952 PEX14O75381 377 aa6.69□□□□□ -1.34
LSM5-205ENST00000409952 B3GALT4O96024 378 aa6.69□□□□□ -1.34
LSM5-205ENST00000409952 RLBP1P12271 317 aa6.69□□□□□ -1.34
LSM5-205ENST00000409952 GYS2P54840 703 aa6.69□□□□□ -1.34
LSM5-205ENST00000409952 PCDH1Q08174 1060 aa6.69□□□□□ -1.34
LSM5-205ENST00000409952 CCDC85BQ15834 202 aaPredicted RBP6.69□□□□□ -1.34
LSM5-205ENST00000409952 DUOXA2Q1HG44 320 aa6.69□□□□□ -1.34
LSM5-205ENST00000409952 TNNI3KQ59H18 835 aa6.69□□□□□ -1.34
LSM5-205ENST00000409952 RPS26P11Q5JNZ5 115 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms