RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 BCL2L12Q9HB09 334 aa5.04□□□□□ -1.6
SMC6-203ENST00000402989 CASZ1Q86V15 1759 aa5.04□□□□□ -1.6
SMC6-203ENST00000402989 FAM205CA6NFA0 338 aa5.04□□□□□ -1.6
SMC6-203ENST00000402989 PDIA4P13667 645 aaKnown RBP5.04□□□□□ -1.6
SMC6-203ENST00000402989 AKAP17AQ02040 695 aaKnown RBP5.04□□□□□ -1.6
SMC6-203ENST00000402989 GRIN1Q05586 938 aa5.04□□□□□ -1.6
SMC6-203ENST00000402989 RTN1Q16799 776 aa5.04□□□□□ -1.6
SMC6-203ENST00000402989 FAM98CQ17RN3 349 aaKnown RBP5.04□□□□□ -1.6
SMC6-203ENST00000402989 CCDC152Q4G0S7 254 aa5.04□□□□□ -1.6
SMC6-203ENST00000402989 C3orf67Q6ZVT6 689 aa5.04□□□□□ -1.6
SMC6-203ENST00000402989 DHX40Q8IX18 779 aaKnown RBP5.04□□□□□ -1.6
SMC6-203ENST00000402989 FMR1NBQ8N0W7 255 aaPredicted RBP5.04□□□□□ -1.6
SMC6-203ENST00000402989 KCNG4Q8TDN1 519 aa5.04□□□□□ -1.6
SMC6-203ENST00000402989 STAMQ92783 540 aa5.04□□□□□ -1.6
SMC6-203ENST00000402989 NACAP1Q9BZK3 213 aa5.04□□□□□ -1.6
SMC6-203ENST00000402989 NAT10Q9H0A0 1025 aaKnown RBP5.04□□□□□ -1.6
SMC6-203ENST00000402989 PDCL3Q9H2J4 239 aa5.04□□□□□ -1.6
SMC6-203ENST00000402989 RTEL1Q9NZ71 1219 aa5.04□□□□□ -1.6
SMC6-203ENST00000402989 TACC3Q9Y6A5 838 aa5.04□□□□□ -1.6
SMC6-203ENST00000402989 RGPD3A6NKT7 1758 aaPredicted RBP5.04□□□□□ -1.6
SMC6-203ENST00000402989 RGPD4Q7Z3J3 1758 aa5.04□□□□□ -1.6
SMC6-203ENST00000402989 TJP1Q07157 1748 aa5.04□□□□□ -1.6
SMC6-203ENST00000402989 ZMYM6O95789 1325 aa5.04□□□□□ -1.6
SMC6-203ENST00000402989 SALL1Q9NSC2 1324 aa5.04□□□□□ -1.6
SMC6-203ENST00000402989 CTAGE5O15320 804 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 CASP1P29466 404 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 SART3Q15020 963 aaKnown RBP5.03□□□□□ -1.6
SMC6-203ENST00000402989 SAFBQ15424 915 aaKnown RBP eCLIP5.03□□□□□ -1.6
SMC6-203ENST00000402989 CFAP100Q494V2 611 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 ERFEQ4G0M1 354 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 PPP4R3BQ5MIZ7 849 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 ADALQ6DHV7 355 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 PTF1AQ7RTS3 328 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 PLA2G4DQ86XP0 818 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 DIS3L2Q8IYB7 885 aaKnown RBP5.03□□□□□ -1.6
SMC6-203ENST00000402989 TRIM22Q8IYM9 498 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 CNNM3Q8NE01 707 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 ENGASEQ8NFI3 743 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 VPS54Q9P1Q0 977 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 KIAA1468Q9P260 1216 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 CDKL5O76039 1030 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 TPM3P06753 285 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 KLRK1P26718 216 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 AFMP43652 599 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 TRIM28Q13263 835 aaKnown RBP5.03□□□□□ -1.6
SMC6-203ENST00000402989 FAM47AQ5JRC9 791 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 AKNAD1Q5T1N1 836 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 ADGRA1Q86SQ6 560 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 HOMER1Q86YM7 354 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 VGLL2Q8N8G2 317 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 OXER1Q8TDS5 423 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 GPR101Q96P66 508 aaPredicted RBP5.03□□□□□ -1.6
SMC6-203ENST00000402989 AGXT2Q9BYV1 514 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 LY9Q9HBG7 655 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 SRP68Q9UHB9 627 aaKnown RBP5.03□□□□□ -1.6
SMC6-203ENST00000402989 LAMB4A4D0S4 1761 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 GSG1L2A8MUP6 293 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 PATL2C9JE40 543 aaKnown RBP5.03□□□□□ -1.6
SMC6-203ENST00000402989 NMT2O60551 498 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 CDK11BP21127 795 aaKnown RBP5.03□□□□□ -1.6
SMC6-203ENST00000402989 IL6STP40189 918 aaPredicted RBP5.03□□□□□ -1.6
SMC6-203ENST00000402989 STX17P56962 302 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 TPM4P67936 248 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 UBE3CQ15386 1083 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 LRRC8AQ8IWT6 810 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 CCDC112Q8NEF3 446 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 CABP5Q9NP86 173 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 MROH5Q6ZUA9 1318 aa5.03□□□□□ -1.6
SMC6-203ENST00000402989 MAGEB6P1A0A0J9YX57 407 aa5.02□□□□□ -1.61
SMC6-203ENST00000402989 U2AF2P26368 475 aaKnown RBP eCLIP5.02□□□□□ -1.611e-8■■■■□ 20
SMC6-203ENST00000402989 PTPN14Q15678 1187 aa5.02□□□□□ -1.61
SMC6-203ENST00000402989 LONRF3Q496Y0 759 aa5.02□□□□□ -1.61
SMC6-203ENST00000402989 CEP135Q66GS9 1140 aa5.02□□□□□ -1.61
SMC6-203ENST00000402989 USP49Q70CQ1 688 aa5.02□□□□□ -1.61
SMC6-203ENST00000402989 BRAPQ7Z569 592 aa5.02□□□□□ -1.61
SMC6-203ENST00000402989 ANKRD18AQ8IVF6 992 aa5.02□□□□□ -1.61
SMC6-203ENST00000402989 ZNF710Q8N1W2 664 aa5.02□□□□□ -1.61
SMC6-203ENST00000402989 PDCL2Q8N4E4 241 aa5.02□□□□□ -1.61
SMC6-203ENST00000402989 MARCH10Q8NA82 808 aaPredicted RBP5.02□□□□□ -1.61
SMC6-203ENST00000402989 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.02□□□□□ -1.61
SMC6-203ENST00000402989 UBE2Q2Q8WVN8 375 aa5.02□□□□□ -1.61
SMC6-203ENST00000402989 PRIMPOLQ96LW4 560 aa5.02□□□□□ -1.61
SMC6-203ENST00000402989 C8orf37Q96NL8 207 aa5.02□□□□□ -1.61
SMC6-203ENST00000402989 AATFQ9NY61 560 aaKnown RBP eCLIP5.02□□□□□ -1.61
SMC6-203ENST00000402989 CDHR2Q9BYE9 1310 aa5.02□□□□□ -1.61
SMC6-203ENST00000402989 NUP188Q5SRE5 1749 aa5.02□□□□□ -1.61
SMC6-203ENST00000402989 POLR2DO15514 142 aaKnown RBP5.02□□□□□ -1.61
SMC6-203ENST00000402989 YEATS4O95619 227 aa5.02□□□□□ -1.61
SMC6-203ENST00000402989 NOM1Q5C9Z4 860 aaKnown RBP5.02□□□□□ -1.61
SMC6-203ENST00000402989 INTS5Q6P9B9 1019 aaKnown RBP5.02□□□□□ -1.61
SMC6-203ENST00000402989 SHC4Q6S5L8 630 aa5.02□□□□□ -1.61
SMC6-203ENST00000402989 OLFM4Q6UX06 510 aa5.02□□□□□ -1.61
SMC6-203ENST00000402989 RBM43Q6ZSC3 357 aaKnown RBP5.02□□□□□ -1.61
SMC6-203ENST00000402989 ZNF34Q8IZ26 560 aa5.02□□□□□ -1.61
SMC6-203ENST00000402989 IGDCC4Q8TDY8 1250 aa5.02□□□□□ -1.61
SMC6-203ENST00000402989 CPLX3Q8WVH0 158 aa5.02□□□□□ -1.61
SMC6-203ENST00000402989 DPF2Q92785 391 aa5.02□□□□□ -1.61
SMC6-203ENST00000402989 DHX58Q96C10 678 aa5.02□□□□□ -1.61
SMC6-203ENST00000402989 PLA2G12BQ9BX93 195 aa5.02□□□□□ -1.61
SMC6-203ENST00000402989 SPTLC3Q9NUV7 552 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms